FFCP PHASE1:Hg19::chr5:141825669..141825676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:141825669..141825676,- to FFCP PHASE1:Hg19::chr5:141825669..141825676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:141825669..141825676,- | |||
|description=CAGE_peak_at_chr5:141825669..141825676,- | |||
|id=chr5:141825669..141825676,- | |||
|ontology_enrichment_celltype=CL:0000222!2.68e-25!119;CL:0000213!4.88e-15!57;CL:0000215!4.88e-15!57;CL:0000183!4.47e-14!59;CL:0000071!9.24e-13!18;CL:0002546!9.24e-13!18;CL:0000187!1.73e-12!54;CL:0000393!1.90e-12!60;CL:0000211!1.90e-12!60;CL:0000680!2.13e-12!57;CL:0000056!2.13e-12!57;CL:0000355!2.13e-12!57;CL:0000220!2.60e-12!246;CL:0002321!4.76e-12!248;CL:0000359!7.73e-12!32;CL:0000055!2.24e-11!180;CL:0000077!5.03e-11!19;CL:0000076!1.20e-10!62;CL:0000192!1.43e-10!42;CL:0000514!1.43e-10!42;CL:0002139!7.42e-10!24;CL:0002494!6.45e-08!16;CL:1000413!7.99e-08!9;CL:0000115!1.09e-07!35;CL:0002078!5.94e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002554;3.21e-15;2!CL:0002573;9.36e-10;2!CL:0000359;1.32e-09;32!CL:1000746;3.43e-09;7!CL:1000612;3.43e-09;7!CL:0002557;6.18e-08;1!CL:0002591;6.18e-08;1!CL:0002379;6.18e-08;1!CL:1000306;1.59e-07;4!CL:0002547;1.59e-07;4!CL:1000413;3.01e-07;9!CL:0002494;7.30e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,3.22e-15,2;CL:0002573,4.79e-10,2;CL:0000359,1.84e-09,32;CL:1000746,4.95e-09,7;CL:1000612,4.95e-09,7;CL:0002379,3.83e-08,1;CL:0000222,3.93e-08,121;CL:0002591,8.12e-08,1;CL:0002557,1.14e-07,1;CL:1000306,1.64e-07,4;CL:0002547,1.64e-07,4;CL:1000413,2.70e-07,9;CL:0000192,7.93e-07,43;CL:0000514,7.93e-07,43;CL:0002494,8.29e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;6.18e-08;1!DOID:3565;6.18e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.83e-08,1;DOID:3565,3.83e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!3.85e-25!84;UBERON:0003914!3.97e-25!118;UBERON:0001637!2.22e-24!42;UBERON:0003509!2.22e-24!42;UBERON:0004572!2.22e-24!42;UBERON:0001981!2.91e-23!60;UBERON:0007500!2.91e-23!60;UBERON:0004537!2.91e-23!60;UBERON:0006965!2.91e-23!60;UBERON:0000055!6.04e-23!69;UBERON:0002049!9.68e-22!79;UBERON:0007798!9.68e-22!79;UBERON:0001009!5.72e-21!113;UBERON:0000490!5.92e-20!138;UBERON:0004535!7.11e-20!110;UBERON:0004573!3.37e-18!33;UBERON:0004571!3.37e-18!33;UBERON:0001986!9.24e-13!18;UBERON:0004638!9.24e-13!18;UBERON:0004852!9.24e-13!18;UBERON:0004290!6.61e-12!70;UBERON:0000487!1.53e-11!22;UBERON:0001134!4.98e-11!61;UBERON:0002036!4.98e-11!61;UBERON:0003082!4.98e-11!61;UBERON:0002385!2.05e-10!63;UBERON:0001015!2.05e-10!63;UBERON:0000383!2.05e-10!63;UBERON:0005256!3.60e-10!143;UBERON:0000119!9.11e-10!312;UBERON:0000483!1.23e-09!309;UBERON:0006914!1.25e-09!25;UBERON:0000914!2.21e-09!83;UBERON:0002329!2.21e-09!83;UBERON:0003077!2.21e-09!83;UBERON:0003059!2.21e-09!83;UBERON:0007282!2.21e-09!83;UBERON:0009618!2.21e-09!83;UBERON:0007285!2.21e-09!83;UBERON:0000947!2.75e-09!21;UBERON:0010191!2.75e-09!21;UBERON:0000025!5.22e-09!194;UBERON:0000486!7.87e-09!82;UBERON:0000477!5.10e-08!286;UBERON:0003915!7.99e-08!9;UBERON:0004700!7.99e-08!9;UBERON:0001917!7.99e-08!9;UBERON:0007100!8.56e-08!27;UBERON:0004111!9.58e-08!241;UBERON:0000948!9.42e-07!24;UBERON:0005498!9.42e-07!24;UBERON:0004140!9.42e-07!24;UBERON:0009881!9.42e-07!24;UBERON:0004141!9.42e-07!24;UBERON:0003084!9.42e-07!24;UBERON:0007005!9.42e-07!24;UBERON:0004139!9.42e-07!24;UBERON:0004291!9.42e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.37e-18;42!UBERON:0003509;4.37e-18;42!UBERON:0004572;4.37e-18;42!UBERON:0007500;1.65e-15;56!UBERON:0001981;1.65e-15;56!UBERON:0004537;1.65e-15;56!UBERON:0000078;3.52e-14;2!UBERON:0002012;3.52e-14;2!UBERON:0008886;3.52e-14;2!UBERON:0004573;1.52e-13;33!UBERON:0004571;1.52e-13;33!UBERON:0000055;5.78e-10;65!UBERON:0000074;3.43e-09;7!UBERON:0001229;3.43e-09;7!UBERON:0003914;6.46e-09;74!UBERON:0000947;8.69e-08;21!UBERON:0010191;8.69e-08;21!UBERON:0004797;1.59e-07;4!UBERON:0000415;1.59e-07;4!UBERON:0007240;1.59e-07;4!UBERON:0005742;1.59e-07;4!UBERON:0005734;1.59e-07;4!UBERON:0004664;1.59e-07;4!UBERON:0004663;1.59e-07;4!UBERON:0001851;2.67e-07;15!UBERON:0003915;3.01e-07;9!UBERON:0004700;3.01e-07;9!UBERON:0001917;3.01e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.97e-24,42;UBERON:0003509,2.97e-24,42;UBERON:0004572,2.97e-24,42;UBERON:0003914,5.72e-21,117;UBERON:0000055,3.30e-19,68;UBERON:0004872,2.77e-17,83;UBERON:0007500,1.48e-16,59;UBERON:0001981,1.48e-16,59;UBERON:0004537,1.48e-16,59;UBERON:0006965,1.48e-16,59;UBERON:0002049,2.29e-16,78;UBERON:0007798,2.29e-16,78;UBERON:0004535,2.82e-16,109;UBERON:0001009,9.58e-16,112;UBERON:0004573,5.72e-15,33;UBERON:0004571,5.72e-15,33;UBERON:0000078,8.41e-14,2;UBERON:0007497,8.41e-14,2;UBERON:0003643,8.41e-14,2;UBERON:0003504,8.41e-14,2;UBERON:0003469,8.41e-14,2;UBERON:0003496,8.41e-14,2;UBERON:0002012,8.41e-14,2;UBERON:0008886,8.41e-14,2;UBERON:0007303,8.41e-14,2;UBERON:0002061,8.41e-14,2;UBERON:0005432,8.41e-14,2;UBERON:0004363,8.41e-14,2;UBERON:0003498,2.64e-12,5;UBERON:0005985,2.64e-12,5;UBERON:0000025,4.31e-11,192;UBERON:0004111,2.79e-10,240;UBERON:0004145,1.66e-09,3;UBERON:0000948,2.39e-09,24;UBERON:0005498,2.39e-09,24;UBERON:0004140,2.39e-09,24;UBERON:0009881,2.39e-09,24;UBERON:0004141,2.39e-09,24;UBERON:0003084,2.39e-09,24;UBERON:0007005,2.39e-09,24;UBERON:0004139,2.39e-09,24;UBERON:0004291,2.39e-09,24;UBERON:0010532,4.95e-09,7;UBERON:0000074,4.95e-09,7;UBERON:0001229,4.95e-09,7;UBERON:0001230,4.95e-09,7;UBERON:0003220,4.95e-09,7;UBERON:0005749,4.95e-09,7;UBERON:0004199,4.95e-09,7;UBERON:0004209,4.95e-09,7;UBERON:0004198,4.95e-09,7;UBERON:0007503,2.10e-08,78;UBERON:0007100,2.98e-08,27;UBERON:0003081,5.73e-08,203;UBERON:0005103,5.82e-08,8;UBERON:0000083,5.82e-08,8;UBERON:0009201,5.82e-08,8;UBERON:0006553,5.82e-08,8;UBERON:0003074,5.82e-08,8;UBERON:0003060,5.82e-08,8;UBERON:0000947,8.20e-08,21;UBERON:0010191,8.20e-08,21;UBERON:0000415,1.64e-07,4;UBERON:0007240,1.64e-07,4;UBERON:0005742,1.64e-07,4;UBERON:0005734,1.64e-07,4;UBERON:0004664,1.64e-07,4;UBERON:0004663,1.64e-07,4;UBERON:0003915,2.70e-07,9;UBERON:0004700,2.70e-07,9;UBERON:0001917,2.70e-07,9;UBERON:0001851,3.67e-07,15;UBERON:0000080,3.98e-07,9;UBERON:0002120,3.98e-07,9;UBERON:0004875,3.98e-07,9;UBERON:0005721,3.98e-07,9;UBERON:0005754,3.98e-07,9;UBERON:0007297,3.98e-07,9;UBERON:0005256,9.02e-07,122 | |||
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| ||
|short_description=p@chr5:141825669..141825676,- | |||
}} | }} |
Latest revision as of 10:49, 30 July 2015
Short description: | p@chr5:141825669..141825676, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:141825669..141825676, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 3.22e-15 | 2 |
Schwann cell | 4.79e-10 | 2 |
vascular associated smooth muscle cell | 1.84e-09 | 32 |
glomerular cell | 4.95e-09 | 7 |
kidney corpuscule cell | 4.95e-09 | 7 |
meningothelial cell | 3.83e-08 | 1 |
mesodermal cell | 3.93e-08 | 121 |
smooth muscle cell of the pulmonary artery | 8.12e-08 | 1 |
fibroblast of pulmonary artery | 1.14e-07 | 1 |
fibroblast of tunica adventitia of artery | 1.64e-07 | 4 |
fibroblast of the aortic adventitia | 1.64e-07 | 4 |
endothelial cell of artery | 2.70e-07 | 9 |
smooth muscle cell | 7.93e-07 | 43 |
smooth muscle myoblast | 7.93e-07 | 43 |
cardiocyte | 8.29e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.83e-08 | 1 |
meningioma | 3.83e-08 | 1 |