FFCP PHASE1:Hg19::chr5:150407894..150407949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:150407894..150407949,+ | |||
|coexpression_cluster_id=C331 | |||
|description=CAGE_peak_at_chr5:150407894..150407949,+ | |description=CAGE_peak_at_chr5:150407894..150407949,+ | ||
|id=chr5:150407894..150407949,+ | |id=chr5:150407894..150407949,+ | ||
|ontology_enrichment_celltype=CL:0000136!6.18e-09!15 | |ontology_enrichment_celltype=CL:0000136!6.18e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.92e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.39e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.08e-26!115;UBERON:0000468!5.42e-16!659;UBERON:0000922!1.58e-14!612;UBERON:0000467!6.11e-14!625;UBERON:0000480!1.01e-13!626;UBERON:0000062!5.05e-13!511;UBERON:0002050!7.99e-13!605;UBERON:0005423!7.99e-13!605;UBERON:0000923!1.36e-12!604;UBERON:0005291!1.36e-12!604;UBERON:0006598!1.36e-12!604;UBERON:0002532!1.36e-12!604;UBERON:0004111!1.15e-10!241;UBERON:0001049!3.44e-10!57;UBERON:0005068!3.44e-10!57;UBERON:0006241!3.44e-10!57;UBERON:0007135!3.44e-10!57;UBERON:0000481!3.91e-10!347;UBERON:0000025!3.79e-09!194;UBERON:0000475!8.16e-09!365;UBERON:0001017!1.90e-08!82;UBERON:0000477!1.95e-08!286;UBERON:0005743!2.03e-08!86;UBERON:0000483!2.69e-08!309;UBERON:0009569!3.08e-08!113;UBERON:0003080!5.28e-08!42;UBERON:0000119!6.97e-08!312;UBERON:0002616!7.66e-08!59;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0002780!1.76e-07!41;UBERON:0001890!1.76e-07!41;UBERON:0006240!1.76e-07!41;UBERON:0002020!7.73e-07!34;UBERON:0003528!7.73e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!8.08e-26!115;UBERON:0000468!5.42e-16!659;UBERON:0000922!1.58e-14!612;UBERON:0000467!6.11e-14!625;UBERON:0000480!1.01e-13!626;UBERON:0000062!5.05e-13!511;UBERON:0002050!7.99e-13!605;UBERON:0005423!7.99e-13!605;UBERON:0000923!1.36e-12!604;UBERON:0005291!1.36e-12!604;UBERON:0006598!1.36e-12!604;UBERON:0002532!1.36e-12!604;UBERON:0004111!1.15e-10!241;UBERON:0001049!3.44e-10!57;UBERON:0005068!3.44e-10!57;UBERON:0006241!3.44e-10!57;UBERON:0007135!3.44e-10!57;UBERON:0000481!3.91e-10!347;UBERON:0000025!3.79e-09!194;UBERON:0000475!8.16e-09!365;UBERON:0001017!1.90e-08!82;UBERON:0000477!1.95e-08!286;UBERON:0005743!2.03e-08!86;UBERON:0000483!2.69e-08!309;UBERON:0009569!3.08e-08!113;UBERON:0003080!5.28e-08!42;UBERON:0000119!6.97e-08!312;UBERON:0002616!7.66e-08!59;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0002780!1.76e-07!41;UBERON:0001890!1.76e-07!41;UBERON:0006240!1.76e-07!41;UBERON:0002020!7.73e-07!34;UBERON:0003528!7.73e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.12e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-29,114;UBERON:0011216,1.79e-11,223;UBERON:0000922,5.93e-08,592;UBERON:0002050,7.68e-08,564;UBERON:0005423,1.44e-07,581;UBERON:0009569,2.30e-07,112;UBERON:0000923,2.47e-07,560;UBERON:0010316,2.47e-07,560;UBERON:0005291,2.47e-07,560;UBERON:0006598,2.47e-07,560;UBERON:0010317,2.47e-07,560;UBERON:0002532,2.47e-07,560;UBERON:0004921,2.98e-07,118;UBERON:0001049,5.93e-07,56;UBERON:0005068,5.93e-07,56;UBERON:0006241,5.93e-07,56;UBERON:0007135,5.93e-07,56;UBERON:0001017,6.67e-07,81 | |||
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| ||
|short_description=p@chr5:150407894..150407949,+ | |short_description=p@chr5:150407894..150407949,+ | ||
}} | }} |
Latest revision as of 11:46, 30 July 2015
Short description: | p@chr5:150407894..150407949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150407894..150407949, + |
Coexpression cluster: | C331_kidney_thyroid_breast_Adipocyte_adipose_retina_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.39e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.07e-29 | 114 |
organ system subdivision | 1.79e-11 | 223 |
embryo | 5.93e-08 | 592 |
embryonic structure | 7.68e-08 | 564 |
developing anatomical structure | 1.44e-07 | 581 |
subdivision of trunk | 2.30e-07 | 112 |
germ layer | 2.47e-07 | 560 |
germ layer / neural crest | 2.47e-07 | 560 |
embryonic tissue | 2.47e-07 | 560 |
presumptive structure | 2.47e-07 | 560 |
germ layer / neural crest derived structure | 2.47e-07 | 560 |
epiblast (generic) | 2.47e-07 | 560 |
subdivision of digestive tract | 2.98e-07 | 118 |
neural tube | 5.93e-07 | 56 |
neural rod | 5.93e-07 | 56 |
future spinal cord | 5.93e-07 | 56 |
neural keel | 5.93e-07 | 56 |
central nervous system | 6.67e-07 | 81 |