FFCP PHASE1:Hg19::chr5:174252830..174252847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:174252830..174252847,+ | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_at_chr5:174252830..174252847,+ | |description=CAGE_peak_at_chr5:174252830..174252847,+ | ||
|id=chr5:174252830..174252847,+ | |id=chr5:174252830..174252847,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.56e-28!180;CL:0000057!2.85e-19!75;CL:0002620!8.38e-13!23;CL:0000680!1.26e-10!57;CL:0000056!1.26e-10!57;CL:0000355!1.26e-10!57;CL:0000548!1.66e-10!679;CL:0000004!1.66e-10!679;CL:0000255!1.66e-10!679;CL:0000144!2.79e-10!625;CL:0000012!2.98e-10!682;CL:0002371!3.04e-09!591;CL:0000188!3.34e-09!9;CL:0000183!1.22e-08!59;CL:0000187!1.61e-08!54;CL:0000048!3.09e-08!430;CL:0002551!3.13e-08!6;CL:0000723!9.78e-08!436;CL:0000034!4.22e-07!444;CL:0000003!4.30e-07!722;CL:0002556!5.73e-07!6;CL:0000393!6.22e-07!60;CL:0000211!6.22e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.56e-28!180;CL:0000057!2.85e-19!75;CL:0002620!8.38e-13!23;CL:0000680!1.26e-10!57;CL:0000056!1.26e-10!57;CL:0000355!1.26e-10!57;CL:0000548!1.66e-10!679;CL:0000004!1.66e-10!679;CL:0000255!1.66e-10!679;CL:0000144!2.79e-10!625;CL:0000012!2.98e-10!682;CL:0002371!3.04e-09!591;CL:0000188!3.34e-09!9;CL:0000183!1.22e-08!59;CL:0000187!1.61e-08!54;CL:0000048!3.09e-08!430;CL:0002551!3.13e-08!6;CL:0000723!9.78e-08!436;CL:0000034!4.22e-07!444;CL:0000003!4.30e-07!722;CL:0002556!5.73e-07!6;CL:0000393!6.22e-07!60;CL:0000211!6.22e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.83e-16;6!CL:0002559;2.90e-15;5!CL:0000680;7.35e-15;7!CL:0000056;1.83e-12;4!CL:0002092;7.63e-10;10!CL:0000515;1.19e-09;3!CL:0000346;1.69e-09;3!CL:1000428;1.69e-09;3!CL:0002540;3.29e-08;6!CL:0002620;3.43e-08;23!CL:0000188;1.13e-07;9!CL:0002561;1.84e-07;2!CL:0002556;2.84e-07;6!CL:0000057;7.34e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,1.62e-16,6;CL:0002559,2.65e-15,5;CL:0000515,1.93e-12,4;CL:0002092,6.28e-10,10;CL:0000346,1.52e-09,3;CL:1000428,1.52e-09,3;CL:0000057,2.07e-09,76;CL:0002620,3.21e-08,23;CL:0002540,3.21e-08,6;CL:0000188,1.54e-07,9;CL:0002561,1.87e-07,2;CL:0000680,3.17e-07,58;CL:0000056,3.17e-07,58;CL:0000355,3.17e-07,58;CL:0002556,4.10e-07,6;CL:0000048,9.43e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000515;1.83e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.83e-19!83;UBERON:0002329!2.83e-19!83;UBERON:0003077!2.83e-19!83;UBERON:0003059!2.83e-19!83;UBERON:0007282!2.83e-19!83;UBERON:0009618!2.83e-19!83;UBERON:0007285!2.83e-19!83;UBERON:0000486!2.83e-16!82;UBERON:0004290!6.87e-16!70;UBERON:0002097!2.17e-15!40;UBERON:0002199!8.13e-14!45;UBERON:0002416!8.13e-14!45;UBERON:0002067!1.02e-11!9;UBERON:0004016!1.02e-11!9;UBERON:0010083!1.02e-11!9;UBERON:0003102!1.79e-11!95;UBERON:0005256!1.18e-10!143;UBERON:0001134!2.38e-09!61;UBERON:0002036!2.38e-09!61;UBERON:0003082!2.38e-09!61;UBERON:0002385!8.84e-09!63;UBERON:0001015!8.84e-09!63;UBERON:0000383!8.84e-09!63;UBERON:0001758!5.73e-07!6;UBERON:0003672!5.73e-07!6 | |ontology_enrichment_uberon=UBERON:0000914!2.83e-19!83;UBERON:0002329!2.83e-19!83;UBERON:0003077!2.83e-19!83;UBERON:0003059!2.83e-19!83;UBERON:0007282!2.83e-19!83;UBERON:0009618!2.83e-19!83;UBERON:0007285!2.83e-19!83;UBERON:0000486!2.83e-16!82;UBERON:0004290!6.87e-16!70;UBERON:0002097!2.17e-15!40;UBERON:0002199!8.13e-14!45;UBERON:0002416!8.13e-14!45;UBERON:0002067!1.02e-11!9;UBERON:0004016!1.02e-11!9;UBERON:0010083!1.02e-11!9;UBERON:0003102!1.79e-11!95;UBERON:0005256!1.18e-10!143;UBERON:0001134!2.38e-09!61;UBERON:0002036!2.38e-09!61;UBERON:0003082!2.38e-09!61;UBERON:0002385!8.84e-09!63;UBERON:0001015!8.84e-09!63;UBERON:0000383!8.84e-09!63;UBERON:0001758!5.73e-07!6;UBERON:0003672!5.73e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;3.02e-24;9!UBERON:0002073;2.90e-15;5!UBERON:0002097;1.09e-11;41!UBERON:0002371;4.34e-11;12!UBERON:0001134;2.80e-10;16!UBERON:0002036;2.80e-10;16!UBERON:0002199;1.14e-09;46!UBERON:0002416;1.14e-09;46!UBERON:0000412;1.69e-09;3!UBERON:0001992;1.69e-09;3!UBERON:0003102;2.75e-09;50!UBERON:0002204;7.31e-09;70!UBERON:0001434;4.41e-08;36!UBERON:0005933;1.84e-07;2!UBERON:0005942;1.84e-07;2!UBERON:0005932;1.84e-07;2!UBERON:0001758;2.84e-07;6!UBERON:0003672;2.84e-07;6!UBERON:0002385;2.85e-07;31!UBERON:0001015;2.85e-07;31!UBERON:0000383;2.85e-07;31!UBERON:0001474;5.06e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,2.40e-24,9;UBERON:0004016,2.40e-24,9;UBERON:0010083,2.40e-24,9;UBERON:0002329,2.24e-16,71;UBERON:0003059,2.24e-16,71;UBERON:0007282,2.24e-16,71;UBERON:0004290,2.24e-16,71;UBERON:0009618,2.24e-16,71;UBERON:0003077,4.63e-16,72;UBERON:0007285,4.63e-16,72;UBERON:0000486,5.85e-16,83;UBERON:0002097,6.40e-16,41;UBERON:0007524,9.37e-16,73;UBERON:0002073,2.65e-15,5;UBERON:0005086,2.65e-15,5;UBERON:0007503,2.40e-14,78;UBERON:0002199,1.02e-13,46;UBERON:0002416,1.02e-13,46;UBERON:0005256,7.27e-13,122;UBERON:0000412,1.52e-09,3;UBERON:0001992,1.52e-09,3;UBERON:0000490,2.83e-09,148;UBERON:0003102,4.19e-09,99;UBERON:0003104,4.40e-08,160;UBERON:0009142,4.40e-08,160;UBERON:0005933,1.87e-07,2;UBERON:0005942,1.87e-07,2;UBERON:0005932,1.87e-07,2;UBERON:0001758,4.10e-07,6;UBERON:0003672,4.10e-07,6 | |||
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| ||
|short_description=p@chr5:174252830..174252847,+ | |short_description=p@chr5:174252830..174252847,+ | ||
}} | }} |
Latest revision as of 13:22, 30 July 2015
Short description: | p@chr5:174252830..174252847, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:174252830..174252847, + |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 1.62e-16 | 6 |
hair follicle cell | 2.65e-15 | 5 |
skeletal muscle myoblast | 1.93e-12 | 4 |
bone marrow cell | 6.28e-10 | 10 |
hair follicle dermal papilla cell | 1.52e-09 | 3 |
stem cell of epidermis | 1.52e-09 | 3 |
fibroblast | 2.07e-09 | 76 |
skin fibroblast | 3.21e-08 | 23 |
mesenchymal stem cell of the bone marrow | 3.21e-08 | 6 |
cell of skeletal muscle | 1.54e-07 | 9 |
outer root sheath cell | 1.87e-07 | 2 |
muscle precursor cell | 3.17e-07 | 58 |
myoblast | 3.17e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-07 | 58 |
fibroblast of periodontium | 4.10e-07 | 6 |
multi fate stem cell | 9.43e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
dermis | 2.40e-24 | 9 |
dermatome | 2.40e-24 | 9 |
future dermis | 2.40e-24 | 9 |
somite | 2.24e-16 | 71 |
presomitic mesoderm | 2.24e-16 | 71 |
presumptive segmental plate | 2.24e-16 | 71 |
dermomyotome | 2.24e-16 | 71 |
trunk paraxial mesoderm | 2.24e-16 | 71 |
paraxial mesoderm | 4.63e-16 | 72 |
presumptive paraxial mesoderm | 4.63e-16 | 72 |
multilaminar epithelium | 5.85e-16 | 83 |
skin of body | 6.40e-16 | 41 |
dense mesenchyme tissue | 9.37e-16 | 73 |
hair follicle | 2.65e-15 | 5 |
hair follicle placode | 2.65e-15 | 5 |
epithelial vesicle | 2.40e-14 | 78 |
integument | 1.02e-13 | 46 |
integumental system | 1.02e-13 | 46 |
trunk mesenchyme | 7.27e-13 | 122 |
dermal papilla | 1.52e-09 | 3 |
papillary layer of dermis | 1.52e-09 | 3 |
unilaminar epithelium | 2.83e-09 | 148 |
surface structure | 4.19e-09 | 99 |
mesenchyme | 4.40e-08 | 160 |
entire embryonic mesenchyme | 4.40e-08 | 160 |
hair root sheath | 1.87e-07 | 2 |
hair outer root sheath | 1.87e-07 | 2 |
bulb of hair follicle | 1.87e-07 | 2 |
periodontium | 4.10e-07 | 6 |
dentition | 4.10e-07 | 6 |