FFCP PHASE1:Hg19::chr5:64400723..64400730,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:64400723..64400730,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr5:64400723..64400730,- | |description=CAGE_peak_at_chr5:64400723..64400730,- | ||
|id=chr5:64400723..64400730,- | |id=chr5:64400723..64400730,- | ||
|ontology_enrichment_celltype=CL:0000244!7.00e-21!4;CL:0000731!7.00e-21!4;CL:0002327!1.28e-20!4;CL:0002159!1.51e-14!13;CL:0000317!2.02e-11!2;CL:1000448!2.02e-11!2;CL:0002308!2.02e-11!2;CL:0002140!2.02e-11!2;CL:0002536!4.09e-11!2;CL:0000362!4.43e-11!8;CL:0002166!6.34e-08!3;CL:0002231!8.29e-08!3;CL:0000066!2.52e-07!254 | |ontology_enrichment_celltype=CL:0000244!7.00e-21!4;CL:0000731!7.00e-21!4;CL:0002327!1.28e-20!4;CL:0002159!1.51e-14!13;CL:0000317!2.02e-11!2;CL:1000448!2.02e-11!2;CL:0002308!2.02e-11!2;CL:0002140!2.02e-11!2;CL:0002536!4.09e-11!2;CL:0000362!4.43e-11!8;CL:0002166!6.34e-08!3;CL:0002231!8.29e-08!3;CL:0000066!2.52e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000317;5.04e-34;2!CL:1000448;5.04e-34;2!CL:0002308;5.04e-34;2!CL:0002140;5.04e-34;2!CL:0000362;2.66e-30;9!CL:0002159;5.89e-20;14!CL:0000312;1.40e-14;5!CL:0000622;1.60e-14;5!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000154;2.45e-12;6!CL:0000150;1.12e-08;9!CL:0002077;1.20e-08;34!CL:0000076;2.40e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.04e-34,2;CL:1000448,5.04e-34,2;CL:0002308,5.04e-34,2;CL:0002140,5.04e-34,2;CL:0000362,2.66e-30,9;CL:0002159,5.89e-20,14;CL:0000312,1.40e-14,5;CL:0000622,1.60e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000154,2.45e-12,6;CL:0000076,1.74e-10,63;CL:0002077,6.54e-09,34;CL:0000150,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!1.28e-20!4;UBERON:0005333!1.28e-20!4;UBERON:0008425!1.28e-20!4;UBERON:0005311!1.28e-20!4;UBERON:0000365!6.40e-17!5;UBERON:0005910!2.85e-14!6;UBERON:0002419!2.02e-11!2;UBERON:0007771!2.02e-11!2;UBERON:0003297!2.02e-11!2;UBERON:0001821!2.02e-11!2;UBERON:0003487!2.02e-11!2;UBERON:0001820!2.02e-11!2;UBERON:0005089!2.02e-11!2;UBERON:0005088!2.02e-11!2;UBERON:0000076!8.06e-11!8;UBERON:0005085!8.77e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.04e-34;2!UBERON:0007771;5.04e-34;2!UBERON:0003297;5.04e-34;2!UBERON:0001821;5.04e-34;2!UBERON:0003487;5.04e-34;2!UBERON:0001820;5.04e-34;2!UBERON:0001003;1.04e-18;15!UBERON:0007376;1.04e-18;15!UBERON:0010371;2.68e-09;31!UBERON:0002199;7.66e-07;46!UBERON:0002416;7.66e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.04e-34,2;UBERON:0007771,5.04e-34,2;UBERON:0003297,5.04e-34,2;UBERON:0001821,5.04e-34,2;UBERON:0003487,5.04e-34,2;UBERON:0001820,5.04e-34,2;UBERON:0005089,5.04e-34,2;UBERON:0005088,5.04e-34,2;UBERON:0001003,1.04e-18,15;UBERON:0007376,1.04e-18,15;UBERON:0007383,1.04e-18,15;UBERON:0002097,1.42e-07,41;UBERON:0002199,7.30e-07,46;UBERON:0002416,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93876284338815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93876284338815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:64400723..64400730,- | |short_description=p@chr5:64400723..64400730,- | ||
}} | }} |
Latest revision as of 15:43, 30 July 2015
Short description: | p@chr5:64400723..64400730, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:64400723..64400730, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.04e-34 | 2 |
epithelial cell of sweat gland | 5.04e-34 | 2 |
epithelial cell of skin gland | 5.04e-34 | 2 |
acinar cell of sebaceous gland | 5.04e-34 | 2 |
epidermal cell | 2.66e-30 | 9 |
general ecto-epithelial cell | 5.89e-20 | 14 |
keratinocyte | 1.40e-14 | 5 |
acinar cell | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
protein secreting cell | 2.45e-12 | 6 |
squamous epithelial cell | 1.74e-10 | 63 |
ecto-epithelial cell | 6.54e-09 | 34 |
glandular epithelial cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.04e-34 | 2 |
epidermis gland | 5.04e-34 | 2 |
gland of integumental system | 5.04e-34 | 2 |
sebaceous gland | 5.04e-34 | 2 |
skin sebaceous gland | 5.04e-34 | 2 |
sweat gland | 5.04e-34 | 2 |
sweat gland placode | 5.04e-34 | 2 |
sebaceous gland placode | 5.04e-34 | 2 |
skin epidermis | 1.04e-18 | 15 |
outer epithelium | 1.04e-18 | 15 |
enveloping layer of ectoderm | 1.04e-18 | 15 |
skin of body | 1.42e-07 | 41 |
integument | 7.30e-07 | 46 |
integumental system | 7.30e-07 | 46 |