FFCP PHASE1:Hg19::chr6:112126045..112126050,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:112126045..112126050,+
|short_description=p@chr6:112126045..112126050,+
|description=CAGE_peak_at_chr6:112126045..112126050,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:112126045..112126050,+ | |||
|coexpression_cluster_id=C686 | |||
|description=CAGE_peak_at_chr6:112126045..112126050,+ | |||
|id=chr6:112126045..112126050,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.26e-39!140;CL:0002031!4.43e-35!124;CL:0002087!3.29e-31!119;CL:0002057!2.49e-30!42;CL:0000037!4.89e-30!172;CL:0000566!4.89e-30!172;CL:0000988!3.31e-29!182;CL:0002032!1.05e-28!165;CL:0000837!1.05e-28!165;CL:0000860!1.43e-27!45;CL:0000557!1.19e-22!71;CL:0000766!1.02e-21!76;CL:0000839!5.68e-20!70;CL:0002009!2.41e-18!65;CL:0000791!1.83e-16!18;CL:0000789!1.83e-16!18;CL:0002420!1.83e-16!18;CL:0002419!1.83e-16!18;CL:0000790!1.83e-16!18;CL:0002194!2.93e-16!63;CL:0000576!2.93e-16!63;CL:0000040!2.93e-16!63;CL:0000559!2.93e-16!63;CL:0000763!3.87e-16!112;CL:0000049!3.87e-16!112;CL:0000084!7.06e-14!25;CL:0000827!7.06e-14!25;CL:0000838!1.48e-12!52;CL:0000542!3.55e-12!53;CL:0000051!3.55e-12!53;CL:0000624!1.95e-10!6;CL:0000134!2.50e-10!358;CL:0002320!1.04e-09!365;CL:0000219!2.06e-08!390;CL:0002274!5.19e-08!5;CL:0000457!5.19e-08!5;CL:0002191!5.19e-08!5;CL:0000097!5.19e-08!5;CL:0000831!5.19e-08!5;CL:0002028!5.19e-08!5;CL:0000625!1.12e-07!11;CL:0002393!1.14e-07!9;CL:0002397!1.14e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.10e-26;6!CL:0000791;9.22e-23;18!CL:0000789;9.22e-23;18!CL:0002419;9.22e-23;18!CL:0000860;1.79e-17;33!CL:0002057;1.79e-17;33!CL:0000084;7.60e-16;25!CL:0000623;6.42e-15;3!CL:0000898;3.44e-14;3!CL:0000767;1.13e-13;3!CL:0000473;1.98e-13;39!CL:0000234;1.98e-13;39!CL:0000766;4.53e-12;69!CL:0001014;1.46e-10;2!CL:0001016;1.46e-10;2!CL:0000576;2.52e-10;48!CL:0002087;4.25e-10;104!CL:0000815;7.18e-10;2!CL:0000792;7.18e-10;2!CL:0002677;7.18e-10;2!CL:0000097;1.72e-08;5!CL:0000738;2.72e-07;136!CL:0000542;8.26e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.66e-37,136;CL:0002031,7.89e-33,120;CL:0000037,2.91e-28,168;CL:0000988,3.92e-28,177;CL:0002032,6.11e-28,161;CL:0000837,6.11e-28,161;CL:0000624,4.91e-26,6;CL:0002087,1.34e-25,115;CL:0000791,1.17e-22,18;CL:0000789,1.17e-22,18;CL:0002420,1.17e-22,18;CL:0002419,1.17e-22,18;CL:0000790,1.17e-22,18;CL:0000766,1.16e-21,72;CL:0000557,2.20e-21,67;CL:0000860,2.26e-20,42;CL:0002057,2.26e-20,42;CL:0000473,2.14e-17,48;CL:0000234,2.14e-17,48;CL:0000839,4.16e-17,66;CL:0002009,7.23e-17,61;CL:0000763,4.42e-16,108;CL:0000049,4.42e-16,108;CL:0000084,9.00e-16,25;CL:0000827,9.00e-16,25;CL:0000623,5.35e-15,3;CL:0000825,5.35e-15,3;CL:0000898,4.12e-14,3;CL:0000767,5.62e-14,3;CL:0002194,3.06e-13,59;CL:0000576,3.06e-13,59;CL:0000040,3.06e-13,59;CL:0000559,3.06e-13,59;CL:0000838,9.45e-12,52;CL:0000542,1.78e-11,53;CL:0000051,1.78e-11,53;CL:0001014,1.53e-10,2;CL:0001016,1.53e-10,2;CL:0000815,7.86e-10,2;CL:0000792,7.86e-10,2;CL:0002677,7.86e-10,2;CL:0000134,3.12e-09,354;CL:0002320,6.72e-09,361;CL:0000097,2.47e-08,5;CL:0002028,2.47e-08,5;CL:0000219,9.98e-08,386;CL:0000034,4.22e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;9.22e-23;18!CL:0002057;3.57e-13;42!CL:0000051;8.26e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.77e-22!86;UBERON:0002390!1.97e-21!102;UBERON:0003061!1.97e-21!102;UBERON:0002371!2.34e-21!80;UBERON:0002193!4.06e-19!112;UBERON:0004765!4.24e-18!101;UBERON:0001434!4.24e-18!101;UBERON:0002405!1.65e-13!115;UBERON:0002384!7.13e-09!375;UBERON:0002204!1.29e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-18,76;UBERON:0002390,3.33e-18,98;UBERON:0003061,3.33e-18,98;UBERON:0001474,1.16e-16,82;UBERON:0002193,4.89e-16,108;UBERON:0002405,6.98e-16,93;UBERON:0004765,8.75e-15,90;UBERON:0001434,7.33e-13,100;UBERON:0002384,1.91e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,4.72037132218685,1.91914699048606,1.85779347979291,0,0,0,0,0,0,1.66198622559563,1.60435557976113,0.651032612147555,0,0,0,0.290796477559129,0,0,0.929716147622738,0.411167888021826,1.85823822537062,0.28769239232215,0.256160706529101,0.945928919554341,4.82643953031266,3.87290810150296,5.41705946377367,0.188242339542605,0.818718450173537,0.898893937780338,6.42776173978895,4.49300637906531,7.03270838378945,0,0.398927315243264,0,1.45104619314292,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,1.52032191293582,0,4.05105399586321,3.48108626184973,0.422510572623884,0,0,0,0,0,0.570025487482497,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,2.80254281490768,0,1.57367816091066,2.35806457649499,2.05601498999509,0,2.28145586643513,1.4203434172042,0,1.89397776704795,2.3568472597987,1.55073726208535,2.97884250141517,0,0.520237390239513,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0,4.21542542962113,1.03088233644789,2.78321661221453,0,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,3.02410114837099,3.7441627409691,3.47578569318718,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36060152002293,0.704387472105808,0.207328115540772,1.15295962733569,1.00993946741104,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,4.92576900504818,6.90008239550455,6.93052395910641,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.15714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.123563938946503,0,0.876214728748802,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,4.27450393947851,20.1188508185067,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0.454947352624943,0,0.235265819698172,0,0,0,0.467426619694449,0,0.947015026375446,0,0.889811221596536,0,0.453692771289717,0,0.147855149989634,0,0.899606224327209,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0.606351566874658,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.157421562627358,4.72037132218685,1.91914699048606,1.85779347979291,0,0,0,0,0,0,1.66198622559563,1.60435557976113,0.651032612147555,0,0,0,0.290796477559129,0,0,0.929716147622738,0.411167888021826,1.85823822537062,0.28769239232215,0.256160706529101,0.945928919554341,4.82643953031266,3.87290810150296,5.41705946377367,0.188242339542605,0.818718450173537,0.898893937780338,6.42776173978895,4.49300637906531,7.03270838378945,0,0.398927315243264,0,1.45104619314292,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,1.52032191293582,0,4.05105399586321,3.48108626184973,0.422510572623884,0,0,0,0,0,0.570025487482497,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,2.80254281490768,0,1.57367816091066,2.35806457649499,2.05601498999509,0,2.28145586643513,1.4203434172042,0,1.89397776704795,2.3568472597987,1.55073726208535,2.97884250141517,0,0.520237390239513,0.164437904603676,0,0,0.296573126324121,0.267540828089713,0,0,4.21542542962113,1.03088233644789,2.78321661221453,0,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,0,3.02410114837099,3.7441627409691,3.47578569318718,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.36060152002293,0.704387472105808,0.207328115540772,1.15295962733569,1.00993946741104,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,4.92576900504818,6.90008239550455,6.93052395910641,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,2.15714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.123563938946503,0,0.876214728748802,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0,0,4.27450393947851,20.1188508185067,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0.454947352624943,0,0.235265819698172,0,0,0,0.467426619694449,0,0.947015026375446,0,0.889811221596536,0,0.453692771289717,0,0.147855149989634,0,0.899606224327209,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.531459361253452,0,0,0,0,0.39997479170986,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.981542335574726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0.606351566874658,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:112126045..112126050,+ | |||
}} | }} |
Latest revision as of 18:23, 30 July 2015
Short description: | p@chr6:112126045..112126050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:112126045..112126050, + |
Coexpression cluster: | C686_CD14_immature_CD19_Eosinophils_migratory_Mast_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-18 | 76 |
hematopoietic system | 3.33e-18 | 98 |
blood island | 3.33e-18 | 98 |
bone element | 1.16e-16 | 82 |
hemolymphoid system | 4.89e-16 | 108 |
immune system | 6.98e-16 | 93 |
skeletal element | 8.75e-15 | 90 |
skeletal system | 7.33e-13 | 100 |
connective tissue | 1.91e-08 | 371 |