FFCP PHASE1:Hg19::chr6:130834916..130834919,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:130834916..130834919,- | |||
|coexpression_cluster_id=C565 | |coexpression_cluster_id=C565 | ||
|description=CAGE_peak_at_chr6:130834916..130834919,- | |description=CAGE_peak_at_chr6:130834916..130834919,- | ||
|id=chr6:130834916..130834919,- | |id=chr6:130834916..130834919,- | ||
|ontology_enrichment_celltype=CL:0000037!7.73e-23!172;CL:0000566!7.73e-23!172;CL:0000988!6.71e-22!182;CL:0000791!1.22e-19!18;CL:0000789!1.22e-19!18;CL:0002420!1.22e-19!18;CL:0002419!1.22e-19!18;CL:0000790!1.22e-19!18;CL:0000838!1.26e-19!52;CL:0000542!3.99e-19!53;CL:0000051!3.99e-19!53;CL:0002032!1.99e-18!165;CL:0000837!1.99e-18!165;CL:0000084!1.16e-17!25;CL:0000827!1.16e-17!25;CL:0000738!9.32e-17!140;CL:0000625!1.48e-12!11;CL:0002031!1.83e-10!124;CL:0000624!3.16e-10!6;CL:0000451!3.27e-10!10;CL:0002087!2.56e-09!119;CL:0000784!1.54e-08!3;CL:0000623!1.58e-08!3;CL:0000825!1.58e-08!3;CL:0000453!6.07e-08!5;CL:0000134!5.66e-07!358 | |ontology_enrichment_celltype=CL:0000037!7.73e-23!172;CL:0000566!7.73e-23!172;CL:0000988!6.71e-22!182;CL:0000791!1.22e-19!18;CL:0000789!1.22e-19!18;CL:0002420!1.22e-19!18;CL:0002419!1.22e-19!18;CL:0000790!1.22e-19!18;CL:0000838!1.26e-19!52;CL:0000542!3.99e-19!53;CL:0000051!3.99e-19!53;CL:0002032!1.99e-18!165;CL:0000837!1.99e-18!165;CL:0000084!1.16e-17!25;CL:0000827!1.16e-17!25;CL:0000738!9.32e-17!140;CL:0000625!1.48e-12!11;CL:0002031!1.83e-10!124;CL:0000624!3.16e-10!6;CL:0000451!3.27e-10!10;CL:0002087!2.56e-09!119;CL:0000784!1.54e-08!3;CL:0000623!1.58e-08!3;CL:0000825!1.58e-08!3;CL:0000453!6.07e-08!5;CL:0000134!5.66e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.59e-20;3!CL:0000784;2.14e-20;3!CL:0000791;1.07e-16;18!CL:0000789;1.07e-16;18!CL:0002419;1.07e-16;18!CL:0000451;9.67e-15;10!CL:0001014;5.62e-14;2!CL:0001016;5.62e-14;2!CL:0000084;8.58e-12;25!CL:0000840;2.50e-10;5!CL:0000624;3.43e-10;6!CL:0000625;1.32e-09;11!CL:0000542;2.21e-09;53!CL:0000037;1.39e-07;1!CL:0001024;1.39e-07;1!CL:0000895;1.39e-07;1!CL:0000990;4.90e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.64e-20,3;CL:0000623,1.76e-20,3;CL:0000825,1.76e-20,3;CL:0000037,1.95e-17,168;CL:0000791,9.71e-17,18;CL:0000789,9.71e-17,18;CL:0002420,9.71e-17,18;CL:0002419,9.71e-17,18;CL:0000790,9.71e-17,18;CL:0000988,2.56e-16,177;CL:0000838,1.38e-15,52;CL:0000542,3.00e-15,53;CL:0000051,3.00e-15,53;CL:0000738,6.78e-15,136;CL:0000451,9.54e-15,10;CL:0001014,7.07e-14,2;CL:0001016,7.07e-14,2;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0000084,8.02e-12,25;CL:0000827,8.02e-12,25;CL:0002031,1.84e-10,120;CL:0000840,2.58e-10,5;CL:0001029,2.58e-10,5;CL:0000624,2.66e-10,6;CL:0000625,1.45e-09,11;CL:0002087,3.41e-08,115;CL:0001024,1.04e-07,1;CL:0000810,1.26e-07,1;CL:0000895,1.26e-07,1;CL:0002436,1.26e-07,1;CL:0002427,1.26e-07,1;CL:0002428,1.26e-07,1;CL:0002429,1.26e-07,1;CL:0002433,1.26e-07,1;CL:0002431,1.26e-07,1;CL:0002432,1.26e-07,1;CL:0000990,5.00e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-16;18!CL:0000051;2.21e-09;53!CL:0002427;1.39e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.95e-07!7 | |ontology_enrichment_uberon=UBERON:0004177!2.95e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,3.45446458287491,0.464448369948228,0,0,0,0,0,1.76160263600908,3.87796785972314,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,2.29363936875137,15.8605594294831,8.40762844472304,0,3.73748563216283,1.96505381374582,0.822405995998037,0,0,0.473447805734733,0,1.6711568532776,0.589211814949674,0.221533894583621,0.270803863765016,0.512365278902701,0.910415432919148,0.493313713811028,1.38175008892924,2.89803085735052,0,0,0,0.906474741580529,1.53288197440768,3.09264700934367,1.51811815211702,0.637130828648193,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0.821127996921047,7.25784275609037,1.60464117470104,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8618874916641,2.85997455390064,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48716888767323,2.80315847317372,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1974762285969,0.957526850661834,0.846694330895531,0,0.842391534340376,0,0,2.50634477090067,0.169291777801603,3.21176150207399,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.490696182767533,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.372448285775147,0.224263725161227,0,0,0,0,0.202056159043763,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,3.45446458287491,0.464448369948228,0,0,0,0,0,1.76160263600908,3.87796785972314,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,2.29363936875137,15.8605594294831,8.40762844472304,0,3.73748563216283,1.96505381374582,0.822405995998037,0,0,0.473447805734733,0,1.6711568532776,0.589211814949674,0.221533894583621,0.270803863765016,0.512365278902701,0.910415432919148,0.493313713811028,1.38175008892924,2.89803085735052,0,0,0,0.906474741580529,1.53288197440768,3.09264700934367,1.51811815211702,0.637130828648193,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0.821127996921047,7.25784275609037,1.60464117470104,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8618874916641,2.85997455390064,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.48716888767323,2.80315847317372,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0.460385919864187,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1974762285969,0.957526850661834,0.846694330895531,0,0.842391534340376,0,0,2.50634477090067,0.169291777801603,3.21176150207399,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531459361253452,0.490696182767533,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.372448285775147,0.224263725161227,0,0,0,0,0.202056159043763,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:130834916..130834919,- | |short_description=p@chr6:130834916..130834919,- | ||
}} | }} |
Latest revision as of 19:23, 30 July 2015
Short description: | p@chr6:130834916..130834919, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:130834916..130834919, - |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data