FFCP PHASE1:Hg19::chr6:159660599..159660610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:159660599..159660610,+ | |||
|coexpression_cluster_id=C4579 | |coexpression_cluster_id=C4579 | ||
|description=CAGE_peak_at_chr6:159660599..159660610,+ | |description=CAGE_peak_at_chr6:159660599..159660610,+ | ||
|id=chr6:159660599..159660610,+ | |id=chr6:159660599..159660610,+ | ||
|ontology_enrichment_celltype=CL:0002334!1.01e-12!12;CL:0000057!6.09e-10!75;CL:0002580!1.19e-07!3;CL:0000135!1.88e-07!3;CL:0000386!1.88e-07!3;CL:0000388!1.88e-07!3;CL:0002579!3.26e-07!3;CL:0000499!5.39e-07!27 | |ontology_enrichment_celltype=CL:0002334!1.01e-12!12;CL:0000057!6.09e-10!75;CL:0002580!1.19e-07!3;CL:0000135!1.88e-07!3;CL:0000386!1.88e-07!3;CL:0000388!1.88e-07!3;CL:0002579!3.26e-07!3;CL:0000499!5.39e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.13e-17;3!CL:0000135;4.20e-17;3!CL:0000388;4.20e-17;3!CL:0002334;3.01e-16;12!CL:0000153;1.59e-14;9!CL:0000447;1.59e-14;9!CL:0000499;5.33e-14;28!CL:0000327;3.03e-12;15!CL:0000138;1.46e-08;6!CL:0002579;2.07e-08;3!CL:0000214;6.83e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.26e-17,3;CL:0000135,4.20e-17,3;CL:0000388,4.20e-17,3;CL:0002334,2.79e-16,12;CL:0000153,1.57e-14,9;CL:0000447,1.57e-14,9;CL:0000499,5.39e-14,28;CL:0000057,5.96e-13,76;CL:0000327,3.06e-12,15;CL:0000058,1.58e-08,6;CL:0000138,1.58e-08,6;CL:0002579,2.07e-08,3;CL:0000214,6.05e-08,3;CL:0002581,8.49e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.25e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;7.59e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.03e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!1.88e-07!3;UBERON:0004457!3.04e-07!12;UBERON:0000042!3.04e-07!12 | |ontology_enrichment_uberon=UBERON:0000043!1.88e-07!3;UBERON:0004457!3.04e-07!12;UBERON:0000042!3.04e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.20e-17;3!UBERON:0000043;4.20e-17;3!UBERON:0007845;4.20e-17;3!UBERON:0004457;8.72e-10;9!UBERON:0000042;8.72e-10;9!UBERON:0006915;6.83e-08;3!UBERON:0007616;6.83e-08;3!UBERON:0002217;6.83e-08;3!UBERON:0002018;6.83e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.20e-17,3;UBERON:0000043,4.20e-17,3;UBERON:0007845,4.20e-17,3;UBERON:0006915,6.05e-08,3;UBERON:0007616,6.05e-08,3;UBERON:0002217,6.05e-08,3;UBERON:0002018,6.05e-08,3;UBERON:0004457,2.21e-07,12;UBERON:0000042,2.21e-07,12 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,4.49024208778554,0,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,3.56400857184616,11.3742787468136,0,0,0,0,0,0,0,6.15976041517047,0,0.89694817844431,0.427114777637135,0,0,0,0,0.37223371266318,1.85653965465393,1.07180705677318,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,4.21783273291921,11.0492620767405,9.5424432107245,0.640695746278505,7.16390148693385,3.53878626515936,2.96836132889982,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,2.01452822600355,1.56768049849117,0,0,0,0,0,0,0,0,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.89996871767898,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,2.28841683889275,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58591088751157,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,4.6392577253528,1.94284397223656,0,0,0,0,0,0,0,2.62271472604749,0,0.245148321753905,0,0,0,1.6906229103336,1.52934403219035,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,15.2517957448368,2.77305377178851,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,0.0645889098360061,0,0.112131862580613,0.509177266225319,1.61693751166575,0,2.39563310759697,0.0673520530145875,0,1.66330178273007,0,0,0,0,4.69281884806909,0.122241444182866,1.22068853494722,0,0,0 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|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,4.49024208778554,0,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,3.56400857184616,11.3742787468136,0,0,0,0,0,0,0,6.15976041517047,0,0.89694817844431,0.427114777637135,0,0,0,0,0.37223371266318,1.85653965465393,1.07180705677318,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,4.21783273291921,11.0492620767405,9.5424432107245,0.640695746278505,7.16390148693385,3.53878626515936,2.96836132889982,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,2.01452822600355,1.56768049849117,0,0,0,0,0,0,0,0,0,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.89996871767898,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.367182116944987,0,0,0,0,0,2.28841683889275,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58591088751157,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0.31020638566432,0.955538938977433,0,0,0,0,0,4.6392577253528,1.94284397223656,0,0,0,0,0,0,0,2.62271472604749,0,0.245148321753905,0,0,0,1.6906229103336,1.52934403219035,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,15.2517957448368,2.77305377178851,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,0.0645889098360061,0,0.112131862580613,0.509177266225319,1.61693751166575,0,2.39563310759697,0.0673520530145875,0,1.66330178273007,0,0,0,0,4.69281884806909,0.122241444182866,1.22068853494722,0,0,0 | ||
|short_description=p@chr6:159660599..159660610,+ | |short_description=p@chr6:159660599..159660610,+ | ||
}} | }} |
Latest revision as of 21:35, 30 July 2015
Short description: | p@chr6:159660599..159660610, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:159660599..159660610, + |
Coexpression cluster: | C4579_Preadipocyte_Fibroblast_skeletal_skin_osteosarcoma_Chondrocyte_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.26e-17 | 3 |
fibrocyte | 4.20e-17 | 3 |
tendon cell | 4.20e-17 | 3 |
preadipocyte | 2.79e-16 | 12 |
GAG secreting cell | 1.57e-14 | 9 |
carbohydrate secreting cell | 1.57e-14 | 9 |
stromal cell | 5.39e-14 | 28 |
fibroblast | 5.96e-13 | 76 |
extracellular matrix secreting cell | 3.06e-12 | 15 |
chondroblast | 1.58e-08 | 6 |
chondrocyte | 1.58e-08 | 6 |
omentum preadipocyte | 2.07e-08 | 3 |
synovial cell | 6.05e-08 | 3 |
perirenal preadipocyte | 8.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.20e-17 | 3 |
tendon | 4.20e-17 | 3 |
regular connective tissue | 4.20e-17 | 3 |
stratified squamous epithelium | 6.05e-08 | 3 |
layer of synovial tissue | 6.05e-08 | 3 |
synovial joint | 6.05e-08 | 3 |
synovial membrane of synovial joint | 6.05e-08 | 3 |
cavity lining | 2.21e-07 | 12 |
serous membrane | 2.21e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.03e-07 | 1 |