FFCP PHASE1:Hg19::chr6:30685210..30685218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30685210..30685218,+ | |||
|coexpression_cluster_id=C575 | |coexpression_cluster_id=C575 | ||
|description=CAGE_peak_at_chr6:30685210..30685218,+ | |description=CAGE_peak_at_chr6:30685210..30685218,+ | ||
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|ontology_enrichment_celltype=CL:0000037!2.13e-18!172;CL:0000566!2.13e-18!172;CL:0000988!2.34e-18!182;CL:0002032!1.37e-16!165;CL:0000837!1.37e-16!165;CL:0000738!9.63e-15!140;CL:0002031!1.93e-14!124;CL:0000860!4.06e-13!45;CL:0002087!6.00e-13!119;CL:0002057!1.32e-11!42;CL:0000763!4.69e-11!112;CL:0000049!4.69e-11!112;CL:0000839!1.01e-09!70;CL:0000557!1.48e-08!71;CL:0002009!5.79e-08!65;CL:0002194!6.19e-08!63;CL:0000576!6.19e-08!63;CL:0000040!6.19e-08!63;CL:0000559!6.19e-08!63;CL:0000766!1.30e-07!76 | |ontology_enrichment_celltype=CL:0000037!2.13e-18!172;CL:0000566!2.13e-18!172;CL:0000988!2.34e-18!182;CL:0002032!1.37e-16!165;CL:0000837!1.37e-16!165;CL:0000738!9.63e-15!140;CL:0002031!1.93e-14!124;CL:0000860!4.06e-13!45;CL:0002087!6.00e-13!119;CL:0002057!1.32e-11!42;CL:0000763!4.69e-11!112;CL:0000049!4.69e-11!112;CL:0000839!1.01e-09!70;CL:0000557!1.48e-08!71;CL:0002009!5.79e-08!65;CL:0002194!6.19e-08!63;CL:0000576!6.19e-08!63;CL:0000040!6.19e-08!63;CL:0000559!6.19e-08!63;CL:0000766!1.30e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-51;33!CL:0002057;3.26e-51;33!CL:0000473;1.08e-34;39!CL:0000234;1.08e-34;39!CL:0000576;3.40e-22;48!CL:0000766;2.33e-13;69!CL:0002087;3.19e-10;104!CL:0000763;4.91e-08;100!CL:0000738;8.38e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.26e-51;33!CL:0002057;3.26e-51;33!CL:0000473;1.08e-34;39!CL:0000234;1.08e-34;39!CL:0000576;3.40e-22;48!CL:0000766;2.33e-13;69!CL:0002087;3.19e-10;104!CL:0000763;4.91e-08;100!CL:0000738;8.38e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.24e-43,42;CL:0002057,7.24e-43,42;CL:0000473,2.30e-36,48;CL:0000234,2.30e-36,48;CL:0002009,3.08e-28,61;CL:0002194,2.70e-27,59;CL:0000576,2.70e-27,59;CL:0000040,2.70e-27,59;CL:0000559,2.70e-27,59;CL:0000988,3.11e-26,177;CL:0000839,2.11e-25,66;CL:0000557,6.10e-25,67;CL:0000738,7.06e-25,136;CL:0000037,1.75e-24,168;CL:0002031,5.79e-24,120;CL:0002087,6.94e-24,115;CL:0000766,1.77e-22,72;CL:0002032,2.80e-22,161;CL:0000837,2.80e-22,161;CL:0000763,1.98e-20,108;CL:0000049,1.98e-20,108;CL:0000219,8.67e-08,386;CL:0000134,1.16e-07,354;CL:0002320,2.95e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-32;42!CL:0000049;2.70e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.42e-32;42!CL:0000049;2.70e-07;108 | ||
|ontology_enrichment_disease=DOID:162!4.99e-07!235;DOID:2531!6.38e-07!51;DOID:0060083!6.38e-07!51;DOID:14566!7.77e-07!239 | |ontology_enrichment_disease=DOID:162!4.99e-07!235;DOID:2531!6.38e-07!51;DOID:0060083!6.38e-07!51;DOID:14566!7.77e-07!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.74e-08!102;UBERON:0003061!3.74e-08!102;UBERON:0002193!1.21e-07!112;UBERON:0002371!3.25e-07!80;UBERON:0001474!4.20e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!3.74e-08!102;UBERON:0003061!3.74e-08!102;UBERON:0002193!1.21e-07!112;UBERON:0002371!3.25e-07!80;UBERON:0001474!4.20e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.62e-21,98;UBERON:0003061,4.62e-21,98;UBERON:0002371,5.63e-21,76;UBERON:0001474,8.03e-19,82;UBERON:0002405,2.49e-18,93;UBERON:0002193,3.35e-18,108;UBERON:0004765,2.10e-16,90;UBERON:0001434,6.10e-14,100;UBERON:0003081,9.76e-08,203;UBERON:0002204,5.20e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0.408001382488506,0.313454721478088,0.286235987131057,1.36874425072884,1.63205431473244,1.68109492645493,2.46301768349837,2.20390187678302,0,0,0.154816123316076,0.919421224478927,0.90361775633475,0,2.24654881682875,0.568676929949686,0.880801318004542,0,0.601633342410425,0,0,0.32389366601898,0.257575567634187,1.30858414901608,2.64513160582167,0.970336244751265,2.78914844286822,4.93401465626191,7.12324653058738,2.8769239232215,4.61089271752381,1.41889337933151,3.7922024881028,3.87290810150296,14.8969135253776,1.12945403725563,1.91034305040492,4.71919317334678,5.81559395504715,5.1348644332175,3.19668562899521,2.30895910130701,1.39624560335142,1.27867425159808,5.22376629531451,6.80862269629368,5.60540024096017,2.76373531782418,4.69334626578181,5.86409880703815,4.23779651843358,9.94349617166425,12.3420331101945,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,1.70692089026603,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,1.68152568894461,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.493313713811028,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0,0,0,0.473554504088034,0,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0.221729397462564,0,1.30979075497713,0,0,0,0.174129737299267,0.398873881556595,0.715471872916026,2.85997455390064,1.11437250398869,0.596287222100115,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.404132016209064,0.163461903113459,0.605429710579726,0,1.17160715916898,0,0,0,0.469737994575059,0.161872944368132,0.280901613404497,0.204154171254893,0,0.516628905878827,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0.386521706326594,0,0,0.487894824518382,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.55146986366197,0.653638332277218,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,6.62194649121976,0.614942192715568,0.171567810298526,0.219500570817251,0,0.100528972411631,0.185176890317059,0.977424915930974,0,0,0.463721619900307,0.117408694235822,0,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0.702012795417713,0.297262324577456,0.93733833986777,0,0,1.34337784054272,0.871901815541886,0,0.492663237895943,0.704387472105808,0.829312462163088,0.144119953416961,0.6312121671319,0.571481048629521,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0,0.36669142910475,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,1.02738161275192,0.358121926479791,1.90544744788996,0.591092280605782,1.07813787429759,0.256686072559497,0.76228387266739,0,0.773288812777695,0.502548796003046,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0.413536052245775,0,0.533637789017222,1.81876542867756,0,1.20956117331872,0,0.153461973288062,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0,1.20859449591622,0.200506470303285,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0.784349769176855,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,0.877039506583738,1.8300481571743,0.769350375349168,0,0,0.309123034943167,0.457847324091717,0.577566499444116,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.290033387828457,0,0.178064071293475,0,0.192190067365106,0.510450849978337,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,1.58510321173008,0,0,0,0,0.272999822815972,0.282810863907425,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0.563391205064483,0,0,0.35667105148125,0,0.211107635297664,0,0.75894634753143,0.699869440489966,0.192444225451024,0,1.08890984861323,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0,0,0,0.320472213382419,0,0,1.11481905075431,0.865615277858669,0.569134746787313,0.637705090915289,0.798317485731266,0.766021480529467,0.423347165447766,0.324621940274555,0.280797178113459,1.14117339516596,0.156679895773023,0,0.677167111206413,0.642352300414798,0,1.27753871307098,1.03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| ||
|short_description=p@chr6:30685210..30685218,+ | |short_description=p@chr6:30685210..30685218,+ | ||
}} | }} |
Latest revision as of 23:39, 30 July 2015
Short description: | p@chr6:30685210..30685218, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30685210..30685218, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.24e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.24e-43 | 42 |
defensive cell | 2.30e-36 | 48 |
phagocyte | 2.30e-36 | 48 |
macrophage dendritic cell progenitor | 3.08e-28 | 61 |
monopoietic cell | 2.70e-27 | 59 |
monocyte | 2.70e-27 | 59 |
monoblast | 2.70e-27 | 59 |
promonocyte | 2.70e-27 | 59 |
hematopoietic cell | 3.11e-26 | 177 |
myeloid lineage restricted progenitor cell | 2.11e-25 | 66 |
granulocyte monocyte progenitor cell | 6.10e-25 | 67 |
leukocyte | 7.06e-25 | 136 |
hematopoietic stem cell | 1.75e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 5.79e-24 | 120 |
nongranular leukocyte | 6.94e-24 | 115 |
myeloid leukocyte | 1.77e-22 | 72 |
hematopoietic oligopotent progenitor cell | 2.80e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-22 | 161 |
myeloid cell | 1.98e-20 | 108 |
common myeloid progenitor | 1.98e-20 | 108 |
motile cell | 8.67e-08 | 386 |
mesenchymal cell | 1.16e-07 | 354 |
connective tissue cell | 2.95e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.62e-21 | 98 |
blood island | 4.62e-21 | 98 |
bone marrow | 5.63e-21 | 76 |
bone element | 8.03e-19 | 82 |
immune system | 2.49e-18 | 93 |
hemolymphoid system | 3.35e-18 | 108 |
skeletal element | 2.10e-16 | 90 |
skeletal system | 6.10e-14 | 100 |
lateral plate mesoderm | 9.76e-08 | 203 |
musculoskeletal system | 5.20e-07 | 167 |