FFCP PHASE1:Hg19::chr6:34041419..34041429,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:34041419..34041429,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr6:34041419..34041429,- | |||
|id=chr6:34041419..34041429,- | |||
|ontology_enrichment_celltype=CL:0000039!1.52e-24!7;CL:0000586!1.52e-24!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |||
|ontology_enrichment_disease=DOID:1799!1.41e-08!1;DOID:10165!1.41e-08!1;DOID:1798!1.41e-08!1;DOID:3095!1.08e-07!22;DOID:2994!1.08e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.50e-22!11;UBERON:0000473!1.53e-21!8;UBERON:0004733!1.50e-20!12;UBERON:0002028!1.50e-20!12;UBERON:0007277!1.50e-20!12;UBERON:0004732!6.19e-19!13;UBERON:0001049!9.86e-18!57;UBERON:0005068!9.86e-18!57;UBERON:0006241!9.86e-18!57;UBERON:0007135!9.86e-18!57;UBERON:0002616!4.64e-17!59;UBERON:0003076!2.40e-16!15;UBERON:0003057!2.40e-16!15;UBERON:0000955!4.88e-14!69;UBERON:0006238!4.88e-14!69;UBERON:0001017!1.85e-13!82;UBERON:0002680!5.80e-13!9;UBERON:0001895!5.80e-13!9;UBERON:0010092!5.80e-13!9;UBERON:0003075!6.67e-13!86;UBERON:0007284!6.67e-13!86;UBERON:0005743!1.00e-12!86;UBERON:0002346!3.23e-12!90;UBERON:0002037!1.36e-11!6;UBERON:0006215!1.36e-11!6;UBERON:0002020!1.86e-11!34;UBERON:0003528!1.86e-11!34;UBERON:0000073!2.69e-11!94;UBERON:0001016!2.69e-11!94;UBERON:0003101!6.39e-11!22;UBERON:0000079!6.39e-11!22;UBERON:0002619!3.07e-10!22;UBERON:0001896!6.51e-10!3;UBERON:0005290!6.51e-10!3;UBERON:0010096!6.51e-10!3;UBERON:0001869!1.91e-09!32;UBERON:0002791!3.83e-09!33;UBERON:0007023!4.00e-09!115;UBERON:0000956!5.35e-09!25;UBERON:0000203!5.35e-09!25;UBERON:0001893!7.37e-09!34;UBERON:0000989!1.63e-08!1;UBERON:0008811!1.63e-08!1;UBERON:0006258!1.63e-08!1;UBERON:0005876!1.63e-08!1;UBERON:0004874!1.63e-08!1;UBERON:0001871!2.25e-08!7;UBERON:0000033!3.37e-08!123;UBERON:0002298!4.22e-08!8;UBERON:0000991!4.25e-08!21;UBERON:0009196!4.25e-08!21;UBERON:0009117!4.25e-08!21;UBERON:0005564!4.25e-08!21;UBERON:0001950!4.96e-08!20;UBERON:0004176!1.02e-07!22;UBERON:0000153!1.05e-07!129;UBERON:0007811!1.05e-07!129;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41;UBERON:0003080!4.67e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.20e-09;53!UBERON:0002616;8.20e-09;53!UBERON:0001016;9.30e-08;83!UBERON:0000955;1.66e-07;68!UBERON:0001017;8.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,1.52581736317083,5.63954225649246,2.36438095162838,0.219385397153973,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.26721740526556,0.0918948995348449,0.50141507858475,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:34041419..34041429,- | |||
}} | |||
Latest revision as of 00:49, 31 July 2015
| Short description: | p@chr6:34041419..34041429, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr6:34041419..34041429, - |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cerebellum | 1.83e-98 | 6 |
| rhombic lip | 1.83e-98 | 6 |
| regional part of metencephalon | 3.75e-66 | 9 |
| metencephalon | 3.75e-66 | 9 |
| future metencephalon | 3.75e-66 | 9 |
| segmental subdivision of hindbrain | 5.59e-50 | 12 |
| hindbrain | 5.59e-50 | 12 |
| presumptive hindbrain | 5.59e-50 | 12 |
| segmental subdivision of nervous system | 3.04e-46 | 13 |
| posterior neural tube | 2.90e-40 | 15 |
| chordal neural plate | 2.90e-40 | 15 |
| regional part of nervous system | 4.68e-12 | 53 |
| regional part of brain | 4.68e-12 | 53 |
| neural tube | 1.77e-11 | 56 |
| neural rod | 1.77e-11 | 56 |
| future spinal cord | 1.77e-11 | 56 |
| neural keel | 1.77e-11 | 56 |
| brain | 1.53e-09 | 68 |
| future brain | 1.53e-09 | 68 |
| central nervous system | 3.31e-08 | 81 |
| neural plate | 3.31e-08 | 82 |
| presumptive neural plate | 3.31e-08 | 82 |
| neurectoderm | 7.10e-08 | 86 |
| nervous system | 1.68e-07 | 89 |