FFCP PHASE1:Hg19::chr6:35511483..35511494,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:35511483..35511494,+ | |||
|coexpression_cluster_id=C1937 | |||
|description=CAGE_peak_at_chr6:35511483..35511494,+ | |||
|id=chr6:35511483..35511494,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.26e-20!7;CL:0000586!1.26e-20!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.03e-112;7!CL:0000586;3.03e-112;7!CL:0002032;4.10e-23;1!CL:0000557;4.10e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.67e-112,7;CL:0000586,3.67e-112,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.23e-35;10!UBERON:0005564;2.23e-35;10 | |||
|ontology_enrichment_disease=DOID:3095!1.67e-13!22;DOID:2994!1.67e-13!22;DOID:2531!2.67e-09!51;DOID:0060083!2.67e-09!51;DOID:162!2.93e-09!235;DOID:14566!7.31e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.85e-36;22!DOID:2994;5.85e-36;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.22e-36,22;DOID:2994,6.22e-36,22 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.49e-09!5;UBERON:0004117!1.49e-09!5;UBERON:0007689!1.49e-09!5;UBERON:0007123!1.49e-09!5;UBERON:0003091!1.49e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.69e-44;8!UBERON:0003135;3.21e-32;11!UBERON:0000991;3.86e-17;21!UBERON:0003101;2.20e-16;22!UBERON:0000079;2.20e-16;22!UBERON:0000922;1.93e-08;49!UBERON:0002323;8.12e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.55e-44,8;UBERON:0003135,3.62e-32,11;UBERON:0000991,4.11e-17,21;UBERON:0009196,4.11e-17,21;UBERON:0009117,4.11e-17,21;UBERON:0005564,4.11e-17,21;UBERON:0004176,2.34e-16,22;UBERON:0003101,2.34e-16,22;UBERON:0000079,2.34e-16,22;UBERON:0002323,4.99e-08,46;UBERON:0003133,1.04e-07,48;UBERON:0004458,1.48e-07,49;UBERON:0003886,6.94e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0.265059536642971,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.708875486211932,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,4.84184199214926,3.8595787096202,0.217294743844016,0,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50323419414493,0.622129148383483,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.380095503034311,4.07955318967927,1.06886962106224,1.92979289023174,1.0028301571695,0,0,0,0,0.213233981900981,0.476128862927481,0.0645889098360061,0,0.224263725161227,2.16400338145761,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:35511483..35511494,+ | |||
}} |
Latest revision as of 01:02, 31 July 2015
Short description: | p@chr6:35511483..35511494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35511483..35511494, + |
Coexpression cluster: | C1937_choriocarcinoma_thyroid_testicular_throat_Alveolar_lung_pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.67e-112 | 7 |
germ cell | 3.67e-112 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.55e-44 | 8 |
male reproductive organ | 3.62e-32 | 11 |
gonad | 4.11e-17 | 21 |
indifferent external genitalia | 4.11e-17 | 21 |
indifferent gonad | 4.11e-17 | 21 |
gonad primordium | 4.11e-17 | 21 |
external genitalia | 2.34e-16 | 22 |
male organism | 2.34e-16 | 22 |
male reproductive system | 2.34e-16 | 22 |
body cavity | 4.99e-08 | 46 |
reproductive organ | 1.04e-07 | 48 |
body cavity or lining | 1.48e-07 | 49 |
body cavity precursor | 6.94e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.22e-36 | 22 |
germ cell cancer | 6.22e-36 | 22 |