FFCP PHASE1:Hg19::chr7:131063657..131063661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:131063657..131063661,+ | |||
|coexpression_cluster_id=C474 | |coexpression_cluster_id=C474 | ||
|description=CAGE_peak_at_chr7:131063657..131063661,+ | |description=CAGE_peak_at_chr7:131063657..131063661,+ | ||
|id=chr7:131063657..131063661,+ | |id=chr7:131063657..131063661,+ | ||
|ontology_enrichment_celltype=CL:0002087!6.49e-09!119;CL:0000738!1.17e-08!140;CL:0000037!6.50e-08!172;CL:0000566!6.50e-08!172;CL:0002032!5.99e-07!165;CL:0000837!5.99e-07!165;CL:0002057!9.02e-07!42;CL:0002031!9.36e-07!124 | |ontology_enrichment_celltype=CL:0002087!6.49e-09!119;CL:0000738!1.17e-08!140;CL:0000037!6.50e-08!172;CL:0000566!6.50e-08!172;CL:0002032!5.99e-07!165;CL:0000837!5.99e-07!165;CL:0002057!9.02e-07!42;CL:0002031!9.36e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.96e-14;6!CL:0000791;1.82e-10;18!CL:0000789;1.82e-10;18!CL:0002419;1.82e-10;18!CL:0000775;1.04e-08;3!CL:0000623;1.10e-08;3!CL:0002393;1.48e-08;6!CL:0002397;1.48e-08;6!CL:0000542;1.64e-07;53!CL:0000084;2.26e-07;25!CL:0000094;7.07e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.64e-15,6;CL:0000738,3.71e-13,136;CL:0000037,2.96e-12,168;CL:0002032,1.23e-11,161;CL:0000837,1.23e-11,161;CL:0002087,2.12e-11,115;CL:0000988,2.19e-11,177;CL:0000838,6.84e-11,52;CL:0002031,1.09e-10,120;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0000791,1.30e-10,18;CL:0000789,1.30e-10,18;CL:0002420,1.30e-10,18;CL:0002419,1.30e-10,18;CL:0000790,1.30e-10,18;CL:0000623,1.13e-08,3;CL:0000825,1.13e-08,3;CL:0000775,1.17e-08,3;CL:0000084,1.80e-07,25;CL:0000827,1.80e-07,25;CL:0000094,6.09e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.82e-10;18!CL:0000051;1.64e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.19e-11;2!UBERON:0002050;3.56e-10;5!UBERON:0005423;3.56e-10;5!UBERON:0001000;4.68e-07;1!UBERON:0005352;4.68e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.40e-11,2;UBERON:0001000,4.69e-07,1;UBERON:0005352,4.69e-07,1;UBERON:0001736,9.79e-07,1;UBERON:0006298,9.79e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,1.91914699048606,0.464448369948228,0,0,0,0.309868802321207,0.710846162437108,0,1.10799081706375,1.00272223735071,1.08505435357926,0.223915474239924,0,0.77272670290256,0.581592955118259,0,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0,0.344745680736619,0.645484683583826,2.70852973188684,0,0.272906150057846,0,0.306083892370903,0,0,0.659702600373432,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0.44931452458598,0.750884464207532,0.64290234678832,0.570025487482497,0.59675003159727,0.547992461293902,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,2.93618594685469,2.29363936875137,0,0.560508562981536,0.526768169550154,1.57367816091066,1.96505381374582,1.23360899399706,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0.883817722424512,0,0,0.512365278902701,0.130059347559878,0.822189523018381,0.552700035571697,0,0.444859689486181,0,0,0.566546713487831,1.14966148080576,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0,0,0.710331756132051,0,0.80642697289893,4.27904313253612,3.47578569318718,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.351339142772504,0.130979075497713,0,0,0.649094787309367,0,0.132957960518865,1.90792499444274,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,1.14734648299525,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.421352420106746,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0,0,0.427114777637135,0,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.788123040807709,4.31255149719035,2.31017465303547,0,0,0,0,0,2.24702107184155,11.966458368161,0,0,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.82707210449155,2.37285620900479,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.184161977871793,0,0.364182336013434,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0,1.0457418040996,0,0,0,0.515205058238611,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0,0,0.413509717453592,0,0.145016693914229,0.255679882248303,0,0.165284915360978,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,0,0.185803175125719,0,0.711418433484141,0,0.199579371432817,0.191505370132367,0.423347165447766,0,0.280797178113459,0.684704037099577,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0.439524537815682,0,0.557216921387392,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0.844501632511974,0.796991953004279,0.276283915531148,1.25966373927138,0.20453736500431,0.369254416383208,0.311039587661807,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.262379999988587,0.724999575434793,0.1137934482855,0,0.709163045303809,2.06846023944879,0.874813840149763,0.347249989866585,0,0.723578631752448,0,0.331737779793674,0.295547618953547,0.219385397153973,0.10893846351899,0.41827123283581,0.538651809526579,0.227884111694002,0.23056390438806,0.269272933229316,0.108647371922008,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0.37950746544837,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0,2.36750641709634,0,0.30607276163049,0.568679216656392,0.150323419414493,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0.569219092059585,0.277349346026277,0.347119476670262,0.0979923974143777,0.08705920658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| ||
|short_description=p@chr7:131063657..131063661,+ | |short_description=p@chr7:131063657..131063661,+ | ||
}} | }} |
Latest revision as of 06:11, 31 July 2015
Short description: | p@chr7:131063657..131063661, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:131063657..131063661, + |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 9.64e-15 | 6 |
leukocyte | 3.71e-13 | 136 |
hematopoietic stem cell | 2.96e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.23e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-11 | 161 |
nongranular leukocyte | 2.12e-11 | 115 |
hematopoietic cell | 2.19e-11 | 177 |
lymphoid lineage restricted progenitor cell | 6.84e-11 | 52 |
hematopoietic lineage restricted progenitor cell | 1.09e-10 | 120 |
lymphocyte | 1.20e-10 | 53 |
common lymphoid progenitor | 1.20e-10 | 53 |
mature alpha-beta T cell | 1.30e-10 | 18 |
alpha-beta T cell | 1.30e-10 | 18 |
immature T cell | 1.30e-10 | 18 |
mature T cell | 1.30e-10 | 18 |
immature alpha-beta T cell | 1.30e-10 | 18 |
natural killer cell | 1.13e-08 | 3 |
pro-NK cell | 1.13e-08 | 3 |
neutrophil | 1.17e-08 | 3 |
T cell | 1.80e-07 | 25 |
pro-T cell | 1.80e-07 | 25 |
granulocyte | 6.09e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.40e-11 | 2 |
vas deferens | 4.69e-07 | 1 |
spermatic cord | 4.69e-07 | 1 |
submandibular gland | 9.79e-07 | 1 |
submandibular gland primordium | 9.79e-07 | 1 |