FFCP PHASE1:Hg19::chr7:38284829..38284854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_M33125,M33127_5end | |association_with_transcript=0bp_to_M33125,M33127_5end | ||
|cluster_id=chr7:38284829..38284854,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_1_at_M33125_5end,CAGE_peak_1_at_M33127_5end | |description=CAGE_peak_1_at_M33125_5end,CAGE_peak_1_at_M33127_5end | ||
|id=chr7:38284829..38284854,- | |id=chr7:38284829..38284854,- | ||
|ontology_enrichment_celltype=CL:0000625!7.70e-31!11;CL:0000084!7.67e-23!25;CL:0000827!7.67e-23!25;CL:0000791!1.17e-22!18;CL:0000789!1.17e-22!18;CL:0002420!1.17e-22!18;CL:0002419!1.17e-22!18;CL:0000790!1.17e-22!18;CL:0000838!2.46e-11!52;CL:0000542!4.55e-11!53;CL:0000051!4.55e-11!53 | |ontology_enrichment_celltype=CL:0000625!7.70e-31!11;CL:0000084!7.67e-23!25;CL:0000827!7.67e-23!25;CL:0000791!1.17e-22!18;CL:0000789!1.17e-22!18;CL:0002420!1.17e-22!18;CL:0002419!1.17e-22!18;CL:0000790!1.17e-22!18;CL:0000838!2.46e-11!52;CL:0000542!4.55e-11!53;CL:0000051!4.55e-11!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;7.48e-30;1!CL:0000911;7.48e-30;1!CL:0000814;7.48e-30;1!CL:0000084;5.65e-11;25!CL:0000791;2.68e-07;18!CL:0000789;2.68e-07;18!CL:0002419;2.68e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.48e-30,1;CL:0000914,7.48e-30,1;CL:0000911,7.48e-30,1;CL:0000814,7.48e-30,1;CL:0002042,7.48e-30,1;CL:0002039,7.48e-30,1;CL:0002040,7.48e-30,1;CL:0002041,7.48e-30,1;CL:0000893,1.15e-15,2;CL:0002489,1.15e-15,2;CL:0000809,1.15e-15,2;CL:0000808,1.15e-15,2;CL:0000894,1.15e-15,2;CL:0000806,1.15e-15,2;CL:0000807,1.15e-15,2;CL:0000805,1.15e-15,2;CL:0002425,1.15e-15,2;CL:0000084,5.28e-11,25;CL:0000827,5.28e-11,25;CL:0000791,2.52e-07,18;CL:0000789,2.52e-07,18;CL:0002420,2.52e-07,18;CL:0002419,2.52e-07,18;CL:0000790,2.52e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;1.15e-15;2!CL:0000790;2.68e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.66e-15!7;UBERON:0002370!2.89e-10!4;UBERON:0005058!2.89e-10!4;UBERON:0009113!2.89e-10!4;UBERON:0003295!2.89e-10!4;UBERON:0005562!2.89e-10!4;UBERON:0003351!5.59e-07!6;UBERON:0000974!5.72e-07!10;UBERON:0001042!7.49e-07!10;UBERON:0009145!7.49e-07!10 | |ontology_enrichment_uberon=UBERON:0004177!8.66e-15!7;UBERON:0002370!2.89e-10!4;UBERON:0005058!2.89e-10!4;UBERON:0009113!2.89e-10!4;UBERON:0003295!2.89e-10!4;UBERON:0005562!2.89e-10!4;UBERON:0003351!5.59e-07!6;UBERON:0000974!5.72e-07!10;UBERON:0001042!7.49e-07!10;UBERON:0009145!7.49e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-08,4;UBERON:0005058,1.70e-08,4;UBERON:0009113,1.70e-08,4;UBERON:0003295,1.70e-08,4;UBERON:0005562,1.70e-08,4 | |||
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| ||
|short_description=p1@M33125,p1@M33127 | |short_description=p1@M33125,p1@M33127 | ||
}} | }} |
Latest revision as of 09:51, 31 July 2015
Short description: | p1@M33125, p1@M33127 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_M33125_5end, CAGE_peak_1_at_M33127_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | 0bp_to_M33125, M33127_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.48e-30 | 1 |
immature NK T cell | 7.48e-30 | 1 |
effector T cell | 7.48e-30 | 1 |
mature NK T cell | 7.48e-30 | 1 |
immature NK T cell stage IV | 7.48e-30 | 1 |
immature NK T cell stage I | 7.48e-30 | 1 |
immature NK T cell stage II | 7.48e-30 | 1 |
immature NK T cell stage III | 7.48e-30 | 1 |
thymocyte | 1.15e-15 | 2 |
double negative thymocyte | 1.15e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.15e-15 | 2 |
DN4 thymocyte | 1.15e-15 | 2 |
DN1 thymic pro-T cell | 1.15e-15 | 2 |
DN2 thymocyte | 1.15e-15 | 2 |
DN3 thymocyte | 1.15e-15 | 2 |
immature single positive thymocyte | 1.15e-15 | 2 |
early T lineage precursor | 1.15e-15 | 2 |
T cell | 5.28e-11 | 25 |
pro-T cell | 5.28e-11 | 25 |
mature alpha-beta T cell | 2.52e-07 | 18 |
alpha-beta T cell | 2.52e-07 | 18 |
immature T cell | 2.52e-07 | 18 |
mature T cell | 2.52e-07 | 18 |
immature alpha-beta T cell | 2.52e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-08 | 4 |
hemolymphoid system gland | 1.70e-08 | 4 |
thymic region | 1.70e-08 | 4 |
pharyngeal gland | 1.70e-08 | 4 |
thymus primordium | 1.70e-08 | 4 |