FFCP PHASE1:Hg19::chr7:80546695..80546720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:80546695..80546720,- | |||
|coexpression_cluster_id=C958 | |||
|description=CAGE_peak_at_chr7:80546695..80546720,- | |description=CAGE_peak_at_chr7:80546695..80546720,- | ||
|id=chr7:80546695..80546720,- | |id=chr7:80546695..80546720,- | ||
|ontology_enrichment_celltype=CL:0000153!3.52e-08!9;CL:0000447!3.52e-08!9;CL:0000244!8.21e-07!4;CL:0000731!8.21e-07!4 | |ontology_enrichment_celltype=CL:0000153!3.52e-08!9;CL:0000447!3.52e-08!9;CL:0000244!8.21e-07!4;CL:0000731!8.21e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.31e-21;9!CL:0000447;2.31e-21;9!CL:0000138;1.83e-14;6!CL:0000244;4.88e-13;4!CL:0000731;4.88e-13;4!CL:0000327;1.37e-12;15!CL:0000214;1.33e-08;3!CL:0000499;1.36e-08;28!CL:0002166;1.54e-08;3!CL:0002621;4.55e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.01e-21,9;CL:0000447,2.01e-21,9;CL:0000058,1.60e-14,6;CL:0000138,1.60e-14,6;CL:0000244,5.21e-13,4;CL:0000731,5.21e-13,4;CL:0000327,1.27e-12,15;CL:0000499,1.18e-08,28;CL:0000214,1.33e-08,3;CL:0002166,1.54e-08,3;CL:0002621,3.68e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.20e-12!14;DOID:120!9.73e-07!27 | |ontology_enrichment_disease=DOID:2394!9.20e-12!14;DOID:120!9.73e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:3371;7.38e-07;1!DOID:4549;7.38e-07;1!DOID:5861;7.38e-07;1!DOID:6496;7.38e-07;1!DOID:3369;7.38e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.75e-07,1;DOID:4549,5.75e-07,1;DOID:5861,5.75e-07,1;DOID:6496,5.75e-07,1;DOID:3369,6.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005910!9.35e-09!6;UBERON:0000365!7.18e-08!5;UBERON:0000992!3.88e-07!13;UBERON:0002118!9.27e-07!5;UBERON:0004532!9.27e-07!5 | |ontology_enrichment_uberon=UBERON:0005910!9.35e-09!6;UBERON:0000365!7.18e-08!5;UBERON:0000992!3.88e-07!13;UBERON:0002118!9.27e-07!5;UBERON:0004532!9.27e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.06e-21;12!UBERON:0000365;1.59e-10;5!UBERON:0005910;7.64e-09;6!UBERON:0006915;1.33e-08;3!UBERON:0007616;1.33e-08;3!UBERON:0002217;1.33e-08;3!UBERON:0002018;1.33e-08;3!UBERON:0001949;4.55e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.68e-10,5;UBERON:0005910,7.97e-09,6;UBERON:0006915,1.33e-08,3;UBERON:0007616,1.33e-08,3;UBERON:0002217,1.33e-08,3;UBERON:0002018,1.33e-08,3;UBERON:0001949,3.68e-08,3;UBERON:0000486,6.79e-07,83 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0,1.30361867064741,1.5905718941022,0.486634870302636,0.945348171640679,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.506522046658319,0.132409180813219,0.860509862246441,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,1.77504796258307,0,0,0.193260853163297,2.72746120590835,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0.93733833986777,5.20744597416465,4.39502801451398,2.50763863567975,2.3250715081117,0,0,0,0,0,0,0.190493682876507,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0.699810938274399,0,0,0,0,0,1.42636905040718,1.30303176000821,0.410952645100767,0.895304816199478,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0,0.256278298511402,0,0.321707842287215,0,0.308419387605311,0,0.410635780069046,0.519254429183621,0.116210378459959,0,2.40607764363942,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.0890320356467374,2.14870389969272,0.384380134730212,0.382838137483752,0.10115778085555,0,1.25924938732256,1.3940745403212,0.924100740528266,0,0,0.18532421910392,0.429374660225974,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,14.1442115649435,26.672886329752,0,0,0.673554789078584,0,0,0,0.43050537267123,3.36942951335251,1.33029046061003,29.1748718262839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0.52418000472609,1.89184635718778,0,0,0,0,2.82419605412801,0,0,0.19871461170299,0,0,0,0,0,0,0.80175617316141,0,0,0,0,1.9026588850306,2.30126261887133,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,1.30634944043764,0,0,2.3854323049959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0.302461847526478,0,0.295710299979268,1.27437413730962,0.449803112163605,1.08684069813382,0.414706207840855,0.265841714557995,1.04349012362347,0,0.380805212168795,0.406870733204662,0.727394636810238,0.429642228169954,0.464033759878494,0.398095888698616,0,0,0,0,0.192619830407303,1.07220795687463,0,0,0,0,0,0.617602894321944,0.438568099157414,0.176689145945881,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0.236387681767936,0,0.156986185701028,0,0.280272163313789,0,0.863710364874486,1.43325506366115,0.142953088353313,0,0,0.347716544605159,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,1.73050624849516,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.488419611665847,0.320182037633146,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr7:80546695..80546720,- | |short_description=p@chr7:80546695..80546720,- | ||
}} | }} |
Latest revision as of 12:01, 31 July 2015
Short description: | p@chr7:80546695..80546720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:80546695..80546720, - |
Coexpression cluster: | C958_Synoviocyte_Urothelial_Fibroblast_Ewing_Mallassezderived_Chondrocyte_epithelioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.01e-21 | 9 |
carbohydrate secreting cell | 2.01e-21 | 9 |
chondroblast | 1.60e-14 | 6 |
chondrocyte | 1.60e-14 | 6 |
transitional epithelial cell | 5.21e-13 | 4 |
urothelial cell | 5.21e-13 | 4 |
extracellular matrix secreting cell | 1.27e-12 | 15 |
stromal cell | 1.18e-08 | 28 |
synovial cell | 1.33e-08 | 3 |
epithelial cell of Malassez | 1.54e-08 | 3 |
gingival epithelial cell | 3.68e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.68e-10 | 5 |
transitional epithelium | 7.97e-09 | 6 |
stratified squamous epithelium | 1.33e-08 | 3 |
layer of synovial tissue | 1.33e-08 | 3 |
synovial joint | 1.33e-08 | 3 |
synovial membrane of synovial joint | 1.33e-08 | 3 |
gingival epithelium | 3.68e-08 | 3 |
multilaminar epithelium | 6.79e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.75e-07 | 1 |
extraosseous chondrosarcoma | 5.75e-07 | 1 |
myxoid chondrosarcoma | 5.75e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 5.75e-07 | 1 |
peripheral primitive neuroectodermal tumor | 6.80e-07 | 1 |