FFCP PHASE1:Hg19::chr7:94059849..94059911,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:94059849..94059911,+ | |||
|coexpression_cluster_id=C1208 | |coexpression_cluster_id=C1208 | ||
|description=CAGE_peak_at_chr7:94059849..94059911,+ | |description=CAGE_peak_at_chr7:94059849..94059911,+ | ||
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|ontology_enrichment_celltype=CL:0000055!2.52e-42!180;CL:0000057!4.61e-26!75;CL:0000680!3.73e-19!57;CL:0000056!3.73e-19!57;CL:0000355!3.73e-19!57;CL:0000187!4.58e-18!54;CL:0000183!7.24e-18!59;CL:0000393!6.22e-15!60;CL:0000211!6.22e-15!60;CL:0000192!1.06e-14!42;CL:0000514!1.06e-14!42;CL:0002620!1.32e-12!23;CL:0000359!3.43e-11!32;CL:0000048!1.36e-10!430;CL:0000723!1.00e-09!436;CL:0000034!3.95e-09!444;CL:0002334!2.28e-08!12 | |ontology_enrichment_celltype=CL:0000055!2.52e-42!180;CL:0000057!4.61e-26!75;CL:0000680!3.73e-19!57;CL:0000056!3.73e-19!57;CL:0000355!3.73e-19!57;CL:0000187!4.58e-18!54;CL:0000183!7.24e-18!59;CL:0000393!6.22e-15!60;CL:0000211!6.22e-15!60;CL:0000192!1.06e-14!42;CL:0000514!1.06e-14!42;CL:0002620!1.32e-12!23;CL:0000359!3.43e-11!32;CL:0000048!1.36e-10!430;CL:0000723!1.00e-09!436;CL:0000034!3.95e-09!444;CL:0002334!2.28e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.91e-13;23!CL:0000359;1.83e-11;32!CL:0000192;5.04e-11;43!CL:0000057;1.67e-10;73!CL:0000187;3.12e-10;55!CL:0002334;4.31e-10;12!CL:0000393;2.89e-08;61!CL:0000211;2.89e-08;61!CL:0002320;5.79e-08;188!CL:0000134;1.24e-07;55!CL:0000723;6.89e-07;61 | |ontology_enrichment_celltype_v019=CL:0002620;9.91e-13;23!CL:0000359;1.83e-11;32!CL:0000192;5.04e-11;43!CL:0000057;1.67e-10;73!CL:0000187;3.12e-10;55!CL:0002334;4.31e-10;12!CL:0000393;2.89e-08;61!CL:0000211;2.89e-08;61!CL:0002320;5.79e-08;188!CL:0000134;1.24e-07;55!CL:0000723;6.89e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.10e-26,76;CL:0000680,1.98e-19,58;CL:0000056,1.98e-19,58;CL:0000355,1.98e-19,58;CL:0000187,4.07e-18,55;CL:0000048,1.69e-17,427;CL:0000723,1.40e-16,433;CL:0000034,2.10e-15,441;CL:0000192,2.51e-15,43;CL:0000514,2.51e-15,43;CL:0000393,6.63e-15,61;CL:0000211,6.63e-15,61;CL:0002620,1.02e-12,23;CL:0000359,5.98e-12,32;CL:0002334,5.32e-10,12;CL:0002320,6.24e-08,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.04e-11;43!CL:0000355;2.16e-10;58 | |ontology_enrichment_development_v019=CL:0000514;5.04e-11;43!CL:0000355;2.16e-10;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr7:94059849..94059911,+ | |short_description=p@chr7:94059849..94059911,+ | ||
}} | }} |
Latest revision as of 12:48, 31 July 2015
Short description: | p@chr7:94059849..94059911, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94059849..94059911, + |
Coexpression cluster: | C1208_Chondrocyte_Preadipocyte_Fibroblast_umbilical_Smooth_skin_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.10e-26 | 76 |
muscle precursor cell | 1.98e-19 | 58 |
myoblast | 1.98e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.98e-19 | 58 |
muscle cell | 4.07e-18 | 55 |
multi fate stem cell | 1.69e-17 | 427 |
somatic stem cell | 1.40e-16 | 433 |
stem cell | 2.10e-15 | 441 |
smooth muscle cell | 2.51e-15 | 43 |
smooth muscle myoblast | 2.51e-15 | 43 |
electrically responsive cell | 6.63e-15 | 61 |
electrically active cell | 6.63e-15 | 61 |
skin fibroblast | 1.02e-12 | 23 |
vascular associated smooth muscle cell | 5.98e-12 | 32 |
preadipocyte | 5.32e-10 | 12 |
connective tissue cell | 6.24e-08 | 361 |