FFCP PHASE1:Hg19::chr8:144635664..144635703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:144635664..144635703,- | |||
|coexpression_cluster_id=C4732 | |||
|description=CAGE_peak_at_chr8:144635664..144635703,- | |description=CAGE_peak_at_chr8:144635664..144635703,- | ||
|id=chr8:144635664..144635703,- | |id=chr8:144635664..144635703,- | ||
|ontology_enrichment_celltype=CL:0000763!6.42e-30!112;CL:0000049!6.42e-30!112;CL:0000766!2.12e-28!76;CL:0000557!3.65e-26!71;CL:0000037!4.52e-25!172;CL:0000566!4.52e-25!172;CL:0002009!9.01e-25!65;CL:0000839!1.31e-24!70;CL:0002032!1.78e-24!165;CL:0000837!1.78e-24!165;CL:0002194!4.67e-24!63;CL:0000576!4.67e-24!63;CL:0000040!4.67e-24!63;CL:0000559!4.67e-24!63;CL:0002057!1.43e-23!42;CL:0000860!3.36e-22!45;CL:0000738!1.19e-21!140;CL:0000988!1.10e-20!182;CL:0002031!6.54e-19!124;CL:0002087!2.16e-17!119;CL:0000134!1.31e-08!358;CL:0002320!1.33e-08!365 | |ontology_enrichment_celltype=CL:0000763!6.42e-30!112;CL:0000049!6.42e-30!112;CL:0000766!2.12e-28!76;CL:0000557!3.65e-26!71;CL:0000037!4.52e-25!172;CL:0000566!4.52e-25!172;CL:0002009!9.01e-25!65;CL:0000839!1.31e-24!70;CL:0002032!1.78e-24!165;CL:0000837!1.78e-24!165;CL:0002194!4.67e-24!63;CL:0000576!4.67e-24!63;CL:0000040!4.67e-24!63;CL:0000559!4.67e-24!63;CL:0002057!1.43e-23!42;CL:0000860!3.36e-22!45;CL:0000738!1.19e-21!140;CL:0000988!1.10e-20!182;CL:0002031!6.54e-19!124;CL:0002087!2.16e-17!119;CL:0000134!1.31e-08!358;CL:0002320!1.33e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.29e-24;33!CL:0002057;9.29e-24;33!CL:0000473;6.12e-22;39!CL:0000234;6.12e-22;39!CL:0000576;1.97e-21;48!CL:0000766;2.15e-17;69!CL:0000763;1.78e-11;100!CL:0000738;2.18e-08;136!CL:0002087;1.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.43e-40,72;CL:0000557,4.09e-38,67;CL:0002009,9.31e-37,61;CL:0000763,1.21e-36,108;CL:0000049,1.21e-36,108;CL:0002194,1.02e-35,59;CL:0000576,1.02e-35,59;CL:0000040,1.02e-35,59;CL:0000559,1.02e-35,59;CL:0000473,1.10e-35,48;CL:0000234,1.10e-35,48;CL:0000839,2.97e-34,66;CL:0000860,9.66e-33,42;CL:0002057,9.66e-33,42;CL:0000037,5.18e-32,168;CL:0002032,6.25e-31,161;CL:0000837,6.25e-31,161;CL:0000738,4.91e-30,136;CL:0000988,1.48e-28,177;CL:0002031,1.45e-26,120;CL:0002087,1.21e-25,115;CL:0000134,3.32e-13,354;CL:0002320,1.38e-12,361;CL:0000219,1.53e-10,386;CL:0002393,6.71e-08,9;CL:0002397,6.71e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-23;42!CL:0000049;1.33e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.52e-25!115;UBERON:0002371!1.70e-24!80;UBERON:0002390!7.65e-22!102;UBERON:0003061!7.65e-22!102;UBERON:0002193!2.08e-20!112;UBERON:0001474!4.23e-20!86;UBERON:0004765!2.51e-17!101;UBERON:0001434!2.51e-17!101;UBERON:0002204!2.53e-09!167;UBERON:0002384!1.88e-08!375;UBERON:0007023!5.52e-08!115 | |ontology_enrichment_uberon=UBERON:0002405!4.52e-25!115;UBERON:0002371!1.70e-24!80;UBERON:0002390!7.65e-22!102;UBERON:0003061!7.65e-22!102;UBERON:0002193!2.08e-20!112;UBERON:0001474!4.23e-20!86;UBERON:0004765!2.51e-17!101;UBERON:0001434!2.51e-17!101;UBERON:0002204!2.53e-09!167;UBERON:0002384!1.88e-08!375;UBERON:0007023!5.52e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.32e-37,76;UBERON:0002390,9.16e-34,98;UBERON:0003061,9.16e-34,98;UBERON:0002405,5.88e-33,93;UBERON:0001474,2.74e-32,82;UBERON:0002193,2.21e-30,108;UBERON:0004765,3.47e-28,90;UBERON:0001434,3.17e-25,100;UBERON:0002384,5.62e-13,371;UBERON:0002204,4.57e-11,167;UBERON:0003081,2.79e-09,203 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.563817616383885,0,1.34088328328186,0,10.1319951267324,0,1.82829939739887,0,0.697801167972428,0,0.527533956456907,0.37129905888014,1.32558950291166,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,2.67446920117829,1.80621296789881,2.51874500203774,3.14691421479123,1.15148819429164,0.619264493264304,0,0,0,1.70427841276664,0.568676929949686,3.52320527201817,7.75593571944628,3.81034450193269,5.64228263861215,9.40444991807682,12.6318529747402,11.07574940827,3.92575244704825,4.1566353805769,5.82201746850759,2.78914844286822,3.28934310417461,2.47765096716083,11.7953880852082,17.4189280439788,14.6618982530923,0.689491361473237,1.93645405075148,1.35426486594342,2.63539275359647,4.63940455098338,4.49446968890169,2.44867113896722,3.20929027076094,2.55734850319616,13.1940520074686,23.1377842841093,17.9014395223732,2.03146467040009,4.53908179752912,3.73693349397345,9.2962006144995,16.6874533894464,14.1172749058326,4.23779651843358,4.41933163185078,3.79754864929061,1.69004229049553,2.97646019951061,5.87044207423452,6.8520464999362,10.5123824989054,12.054419002281,1.42506371870624,4.17725022118089,3.65328307529268,0,0,0,1.28019066769952,2.40237592221607,0,0,0,1.70763890732835,0,1.14681968437569,0,2.24203425192614,2.37045676297569,0.786839080455332,1.57204305099666,0.616804496998528,5.51715434789238,0,0,0,3.00808233589969,0.294605907474837,0.664601683750863,1.62482318259009,6.02029202710673,8.71397628651184,1.64437904603676,3.03985019564433,2.89803085735052,0.889719378972363,1.07016331235885,3.1360657141493,2.26618685395132,0.766440987203842,1.37450978193052,1.77113784413652,0,0,0,1.20460095262218,1.91979916731628,0,0,0,1.00803371612366,1.06976078313403,0.724122019413995,0,2.01210257911091,0.511450247374121,1.44575660953827,1.50401373190767,1.59331170856906,0,0,0,0,0.087834785693126,1.0478326039817,0,0,1.9472843619281,3.65672448328461,1.72845348674525,1.90792499444274,0,3.71457501329565,0.596287222100115,0,0,0.56530794192401,0,1.37559020970034,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.732186172644509,0.367663080345869,0,0.535798369704479,0.44905874525234,0.337834441449967,0,0,0,1.31780417436063,15.511210565933,0,1.49091585508596,0,0.264818361626438,1.43418310374407,0.354668382198357,0,0,0,0,0.67355336034844,0,0.454072282934794,0.576175924479999,1.17160715916898,0,0,0.149448680551801,0,0.161872944368132,0.280901613404497,0.408308342509787,0.491337269247072,2.27316718586684,2.37600571456411,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0.919463387397059,0,0.226864366320042,1.79389635688862,2.56268866582281,0.847727604638247,0,0,2.06112432036503,0.37223371266318,1.0126579934476,0.876933046450788,5.04867548488229,1.74894807420369,0.484938170456436,0,0,0.339121184620975,0,0,0.573609190778008,0.365921118388786,0.397589304964456,0.464775771478074,0.621966330092223,0.756962552626885,0.36497735907583,0,1.28648187638577,0,0.928735856063958,2.16563844500876,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.8231480226628,5.88034845542168,35.4914097501126,2.94848165003288,27.767125614026,0,2.21379189377604,0,0,0,0.100528972411631,0,0.651616610620649,1.03993478527958,0,0.115930404975077,0,0.288732895522148,0.925971025153221,0.190254152234598,0,0,1.23108503043699,2.57404691653161,1.33768046059855,0,0,0.141775097242386,0,0,0,0.985326475791887,3.96217953059517,0,7.78247748451592,1.64115163454294,0.317489471460845,0,1.17217447210047,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0,0,10.7296933755565,0,0,0,0.257207374262142,0,0,1.00084595560703,1.08524321078289,0,0,0.355391948742546,0,0,0,0,1.2162378064119,2.51128545716063,6.32501818449095,0,0,0,0,0.205476322550383,0.179060963239896,0.448340575974109,2.36436912242313,1.50939302401662,1.54011643535698,0,0,0,0,0,15.7291475028908,23.932916736322,36.4685651823711,0.736148950314839,0.500170521059677,0.542530047399471,0.207970861530807,0,0.157702415033935,0.937131319941706,0,0,0,0,0.184369168541703,1.12948698808508,0,0,0.413536052245775,1.94142780736755,1.81436848265855,0,1.66435439510497,0.907170879989041,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0.846016147141356,0,0.184161977871793,0.459257792658427,0.364182336013434,0.524497659837696,0,0,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0.671624264166535,0.438519753291869,0.784306353074702,0,0,0,4.32772248920434,0,0,0.574265537996172,0,0,0.290012154876366,0.770243085573222,0.767518373630648,0.275673144969061,1.82614416276065,2.32026710262766,0.0852266274161009,0.267096106940212,0,0,0.638063562472921,0.30347334256665,0.464845549297286,0,0.6970372701606,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0.42793898803392,1.27281299170375,0,0.899362287916574,0.274537029736055,0.942499218765491,0,0,0,0.975267478179181,0.487426979262569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| ||
|short_description=p@chr8:144635664..144635703,- | |short_description=p@chr8:144635664..144635703,- | ||
}} | }} |
Latest revision as of 15:54, 31 July 2015
Short description: | p@chr8:144635664..144635703, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144635664..144635703, - |
Coexpression cluster: | C4732_Hepatocyte_Neutrophils_CD14_granulocyte_small_Eosinophils_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.43e-40 | 72 |
granulocyte monocyte progenitor cell | 4.09e-38 | 67 |
macrophage dendritic cell progenitor | 9.31e-37 | 61 |
myeloid cell | 1.21e-36 | 108 |
common myeloid progenitor | 1.21e-36 | 108 |
monopoietic cell | 1.02e-35 | 59 |
monocyte | 1.02e-35 | 59 |
monoblast | 1.02e-35 | 59 |
promonocyte | 1.02e-35 | 59 |
defensive cell | 1.10e-35 | 48 |
phagocyte | 1.10e-35 | 48 |
myeloid lineage restricted progenitor cell | 2.97e-34 | 66 |
classical monocyte | 9.66e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.66e-33 | 42 |
hematopoietic stem cell | 5.18e-32 | 168 |
hematopoietic oligopotent progenitor cell | 6.25e-31 | 161 |
hematopoietic multipotent progenitor cell | 6.25e-31 | 161 |
leukocyte | 4.91e-30 | 136 |
hematopoietic cell | 1.48e-28 | 177 |
hematopoietic lineage restricted progenitor cell | 1.45e-26 | 120 |
nongranular leukocyte | 1.21e-25 | 115 |
mesenchymal cell | 3.32e-13 | 354 |
connective tissue cell | 1.38e-12 | 361 |
motile cell | 1.53e-10 | 386 |
intermediate monocyte | 6.71e-08 | 9 |
CD14-positive, CD16-positive monocyte | 6.71e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.32e-37 | 76 |
hematopoietic system | 9.16e-34 | 98 |
blood island | 9.16e-34 | 98 |
immune system | 5.88e-33 | 93 |
bone element | 2.74e-32 | 82 |
hemolymphoid system | 2.21e-30 | 108 |
skeletal element | 3.47e-28 | 90 |
skeletal system | 3.17e-25 | 100 |
connective tissue | 5.62e-13 | 371 |
musculoskeletal system | 4.57e-11 | 167 |
lateral plate mesoderm | 2.79e-09 | 203 |