FFCP PHASE1:Hg19::chr9:117972180..117972191,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:117972180..117972191,+ | |||
|description=CAGE_peak_at_chr9:117972180..117972191,+ | |description=CAGE_peak_at_chr9:117972180..117972191,+ | ||
|id=chr9:117972180..117972191,+ | |id=chr9:117972180..117972191,+ | ||
|ontology_enrichment_celltype=CL:0002368!3.79e-26!13;CL:0002076!3.77e-25!43;CL:0000223!1.84e-17!59;CL:0000244!2.12e-13!4;CL:0000731!2.12e-13!4;CL:0000317!1.22e-12!2;CL:1000448!1.22e-12!2;CL:0002308!1.22e-12!2;CL:0002140!1.22e-12!2;CL:0000066!3.83e-11!254;CL:0002202!6.83e-10!9;CL:0002632!6.83e-10!9;CL:0000068!2.74e-08!3;CL:0000069!2.74e-08!3;CL:0000307!2.74e-08!3;CL:0000377!2.74e-08!3;CL:0002621!6.74e-08!3;CL:0002159!3.06e-07!13;CL:0000362!5.85e-07!8 | |ontology_enrichment_celltype=CL:0002368!3.79e-26!13;CL:0002076!3.77e-25!43;CL:0000223!1.84e-17!59;CL:0000244!2.12e-13!4;CL:0000731!2.12e-13!4;CL:0000317!1.22e-12!2;CL:1000448!1.22e-12!2;CL:0002308!1.22e-12!2;CL:0002140!1.22e-12!2;CL:0000066!3.83e-11!254;CL:0002202!6.83e-10!9;CL:0002632!6.83e-10!9;CL:0000068!2.74e-08!3;CL:0000069!2.74e-08!3;CL:0000307!2.74e-08!3;CL:0000377!2.74e-08!3;CL:0002621!6.74e-08!3;CL:0002159!3.06e-07!13;CL:0000362!5.85e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.09e-44;2!CL:1000448;1.09e-44;2!CL:0002308;1.09e-44;2!CL:0002140;1.09e-44;2!CL:0000244;8.96e-23;4!CL:0000731;8.96e-23;4!CL:0000622;1.41e-18;5!CL:0002368;6.65e-16;13!CL:0000154;1.17e-15;6!CL:0002159;6.52e-15;14!CL:0000150;9.00e-11;9!CL:0000362;9.00e-11;9!CL:0002166;8.31e-09;3!CL:0000307;1.30e-08;3 | |ontology_enrichment_celltype_v019=CL:0000317;1.09e-44;2!CL:1000448;1.09e-44;2!CL:0002308;1.09e-44;2!CL:0002140;1.09e-44;2!CL:0000244;8.96e-23;4!CL:0000731;8.96e-23;4!CL:0000622;1.41e-18;5!CL:0002368;6.65e-16;13!CL:0000154;1.17e-15;6!CL:0002159;6.52e-15;14!CL:0000150;9.00e-11;9!CL:0000362;9.00e-11;9!CL:0002166;8.31e-09;3!CL:0000307;1.30e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.79e-45,2;CL:1000448,9.79e-45,2;CL:0002308,9.79e-45,2;CL:0002140,9.79e-45,2;CL:0000244,8.02e-23,4;CL:0000731,8.02e-23,4;CL:0000622,1.35e-18,5;CL:0002368,7.00e-16,13;CL:0000154,1.13e-15,6;CL:0002159,6.37e-15,14;CL:0000150,8.79e-11,9;CL:0000362,8.79e-11,9;CL:0002166,8.31e-09,3;CL:0000068,1.51e-08,3;CL:0000069,1.51e-08,3;CL:0000307,1.51e-08,3;CL:0000377,1.51e-08,3;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;1.30e-08;3 | |ontology_enrichment_development_v019=CL:0000377;1.30e-08;3 | ||
|ontology_enrichment_disease=DOID:0060060!4.97e-07!1;DOID:0060061!4.97e-07!1;DOID:8691!4.97e-07!1;DOID:3347!5.89e-07!1 | |ontology_enrichment_disease=DOID:0060060!4.97e-07!1;DOID:0060061!4.97e-07!1;DOID:8691!4.97e-07!1;DOID:3347!5.89e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!1.22e-12!2;UBERON:0007771!1.22e-12!2;UBERON:0003297!1.22e-12!2;UBERON:0001821!1.22e-12!2;UBERON:0003487!1.22e-12!2;UBERON:0001820!1.22e-12!2;UBERON:0005089!1.22e-12!2;UBERON:0005088!1.22e-12!2;UBERON:0000365!8.15e-11!5;UBERON:0005910!4.37e-09!6;UBERON:0001004!1.59e-08!72;UBERON:0001949!6.74e-08!3 | |ontology_enrichment_uberon=UBERON:0002419!1.22e-12!2;UBERON:0007771!1.22e-12!2;UBERON:0003297!1.22e-12!2;UBERON:0001821!1.22e-12!2;UBERON:0003487!1.22e-12!2;UBERON:0001820!1.22e-12!2;UBERON:0005089!1.22e-12!2;UBERON:0005088!1.22e-12!2;UBERON:0000365!8.15e-11!5;UBERON:0005910!4.37e-09!6;UBERON:0001004!1.59e-08!72;UBERON:0001949!6.74e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.09e-44;2!UBERON:0007771;1.09e-44;2!UBERON:0003297;1.09e-44;2!UBERON:0001821;1.09e-44;2!UBERON:0003487;1.09e-44;2!UBERON:0001820;1.09e-44;2!UBERON:0000365;1.93e-18;5!UBERON:0005910;1.52e-15;6!UBERON:0000486;2.96e-08;12!UBERON:0001708;6.50e-07;4!UBERON:0008895;6.50e-07;4!UBERON:0001003;7.98e-07;15!UBERON:0007376;7.98e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0002419;1.09e-44;2!UBERON:0007771;1.09e-44;2!UBERON:0003297;1.09e-44;2!UBERON:0001821;1.09e-44;2!UBERON:0003487;1.09e-44;2!UBERON:0001820;1.09e-44;2!UBERON:0000365;1.93e-18;5!UBERON:0005910;1.52e-15;6!UBERON:0000486;2.96e-08;12!UBERON:0001708;6.50e-07;4!UBERON:0008895;6.50e-07;4!UBERON:0001003;7.98e-07;15!UBERON:0007376;7.98e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,9.79e-45,2;UBERON:0007771,9.79e-45,2;UBERON:0003297,9.79e-45,2;UBERON:0001821,9.79e-45,2;UBERON:0003487,9.79e-45,2;UBERON:0001820,9.79e-45,2;UBERON:0005089,9.79e-45,2;UBERON:0005088,9.79e-45,2;UBERON:0000365,1.77e-18,5;UBERON:0005910,1.41e-15,6;UBERON:0001708,6.50e-07,4;UBERON:0008895,6.50e-07,4;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40699917913613,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,1.30012049207304,0,0,0,0,0,0,0,0,0,1.65284915360978,0.384380134730212,5.10450849978336,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.917142992608395,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.40699917913613,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87132768998086,1.30012049207304,0,0,0,0,0,0,0,0,0,1.65284915360978,0.384380134730212,5.10450849978336,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.917142992608395,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:117972180..117972191,+ | |short_description=p@chr9:117972180..117972191,+ | ||
}} | }} |
Latest revision as of 22:09, 31 July 2015
Short description: | p@chr9:117972180..117972191, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:117972180..117972191, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.79e-45 | 2 |
epithelial cell of sweat gland | 9.79e-45 | 2 |
epithelial cell of skin gland | 9.79e-45 | 2 |
acinar cell of sebaceous gland | 9.79e-45 | 2 |
transitional epithelial cell | 8.02e-23 | 4 |
urothelial cell | 8.02e-23 | 4 |
acinar cell | 1.35e-18 | 5 |
respiratory epithelial cell | 7.00e-16 | 13 |
protein secreting cell | 1.13e-15 | 6 |
general ecto-epithelial cell | 6.37e-15 | 14 |
glandular epithelial cell | 8.79e-11 | 9 |
epidermal cell | 8.79e-11 | 9 |
epithelial cell of Malassez | 8.31e-09 | 3 |
duct epithelial cell | 1.51e-08 | 3 |
branched duct epithelial cell | 1.51e-08 | 3 |
tracheal epithelial cell | 1.51e-08 | 3 |
tracheoblast | 1.51e-08 | 3 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
skin gland | 9.79e-45 | 2 |
epidermis gland | 9.79e-45 | 2 |
gland of integumental system | 9.79e-45 | 2 |
sebaceous gland | 9.79e-45 | 2 |
skin sebaceous gland | 9.79e-45 | 2 |
sweat gland | 9.79e-45 | 2 |
sweat gland placode | 9.79e-45 | 2 |
sebaceous gland placode | 9.79e-45 | 2 |
urothelium | 1.77e-18 | 5 |
transitional epithelium | 1.41e-15 | 6 |
jaw skeleton | 6.50e-07 | 4 |
splanchnocranium | 6.50e-07 | 4 |
skin epidermis | 7.86e-07 | 15 |
outer epithelium | 7.86e-07 | 15 |
enveloping layer of ectoderm | 7.86e-07 | 15 |