FFCP PHASE1:Hg19::chr9:119160527..119160548,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:119160527..119160548,+ | |||
|coexpression_cluster_id=C776 | |coexpression_cluster_id=C776 | ||
|description=CAGE_peak_at_chr9:119160527..119160548,+ | |description=CAGE_peak_at_chr9:119160527..119160548,+ | ||
|id=chr9:119160527..119160548,+ | |id=chr9:119160527..119160548,+ | ||
|ontology_enrichment_celltype=CL:0002541;7.93e-19;3!CL:0002539;1.22e-12;10!CL:0002561;4.53e-08;2!CL:0002549;7.03e-08;2!CL:0002593;7.03e-08;2!CL:0000359;4.56e-07;32 | |ontology_enrichment_celltype=CL:0000055!6.59e-11!180;CL:0000187!4.31e-10!54;CL:0000359!1.16e-09!32;CL:0000393!1.42e-09!60;CL:0000211!1.42e-09!60;CL:0000680!3.00e-09!57;CL:0000056!3.00e-09!57;CL:0000355!3.00e-09!57;CL:0000183!9.69e-09!59;CL:0000192!1.63e-08!42;CL:0000514!1.63e-08!42;CL:0000057!7.47e-08!75;CL:1000306!1.05e-07!4;CL:0002547!1.05e-07!4;CL:0002494!2.41e-07!16;CL:0000569!5.59e-07!4;CL:0000011!5.59e-07!4;CL:0002539!7.43e-07!10;CL:0002541!7.54e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;7.93e-19;3!CL:0002539;1.22e-12;10!CL:0002561;4.53e-08;2!CL:0002549;7.03e-08;2!CL:0002593;7.03e-08;2!CL:0000359;4.56e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.54e-19,3;CL:0002539,1.13e-12,10;CL:0002561,4.69e-08,2;CL:0002593,7.52e-08,2;CL:0002549,8.04e-08,2;CL:0000359,6.53e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.42e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003124;7.93e-19;3!UBERON:0000920;7.93e-19;3!UBERON:0004237;1.22e-12;10!UBERON:0004695;1.22e-12;10!UBERON:0002111;1.22e-12;10!UBERON:0004178;1.22e-12;10!UBERON:0000947;2.06e-10;21!UBERON:0010191;2.06e-10;21!UBERON:0004573;2.72e-10;33!UBERON:0004571;2.72e-10;33!UBERON:0001135;1.30e-08;15!UBERON:0005933;4.53e-08;2!UBERON:0005942;4.53e-08;2!UBERON:0005932;4.53e-08;2!UBERON:0005629;7.03e-08;2!UBERON:0005358;7.03e-08;2!UBERON:0001886;7.03e-08;2!UBERON:0002456;7.03e-08;2!UBERON:0004086;7.03e-08;2!UBERON:0005282;7.03e-08;2!UBERON:0005281;7.03e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.72e-12!84;UBERON:0004535!1.14e-11!110;UBERON:0001009!4.30e-11!113;UBERON:0004573!1.78e-09!33;UBERON:0004571!1.78e-09!33;UBERON:0002049!3.48e-09!79;UBERON:0007798!3.48e-09!79;UBERON:0001637!1.10e-08!42;UBERON:0003509!1.10e-08!42;UBERON:0004572!1.10e-08!42;UBERON:0003914!1.33e-08!118;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0002119!7.03e-08!4;UBERON:0004531!7.03e-08!4;UBERON:0002385!7.96e-08!63;UBERON:0001015!7.96e-08!63;UBERON:0000383!7.96e-08!63;UBERON:0000415!1.05e-07!4;UBERON:0007240!1.05e-07!4;UBERON:0005742!1.05e-07!4;UBERON:0005734!1.05e-07!4;UBERON:0004664!1.05e-07!4;UBERON:0004663!1.05e-07!4;UBERON:0000948!1.46e-07!24;UBERON:0005498!1.46e-07!24;UBERON:0004140!1.46e-07!24;UBERON:0009881!1.46e-07!24;UBERON:0004141!1.46e-07!24;UBERON:0003084!1.46e-07!24;UBERON:0007005!1.46e-07!24;UBERON:0004139!1.46e-07!24;UBERON:0004291!1.46e-07!24;UBERON:0000947!2.64e-07!21;UBERON:0010191!2.64e-07!21;UBERON:0001135!4.27e-07!15;UBERON:0001981!4.88e-07!60;UBERON:0007500!4.88e-07!60;UBERON:0004537!4.88e-07!60;UBERON:0006965!4.88e-07!60;UBERON:0004237!7.43e-07!10;UBERON:0004695!7.43e-07!10;UBERON:0002111!7.43e-07!10;UBERON:0004178!7.43e-07!10;UBERON:0000476!7.54e-07!3;UBERON:0000920!7.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.93e-19;3!UBERON:0000920;7.93e-19;3!UBERON:0004237;1.22e-12;10!UBERON:0004695;1.22e-12;10!UBERON:0002111;1.22e-12;10!UBERON:0004178;1.22e-12;10!UBERON:0000947;2.06e-10;21!UBERON:0010191;2.06e-10;21!UBERON:0004573;2.72e-10;33!UBERON:0004571;2.72e-10;33!UBERON:0001135;1.30e-08;15!UBERON:0005933;4.53e-08;2!UBERON:0005942;4.53e-08;2!UBERON:0005932;4.53e-08;2!UBERON:0005629;7.03e-08;2!UBERON:0005358;7.03e-08;2!UBERON:0001886;7.03e-08;2!UBERON:0002456;7.03e-08;2!UBERON:0004086;7.03e-08;2!UBERON:0005282;7.03e-08;2!UBERON:0005281;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.54e-19,3;UBERON:0003124,4.96e-18,7;UBERON:0004237,1.13e-12,10;UBERON:0004695,1.13e-12,10;UBERON:0002111,1.13e-12,10;UBERON:0004178,1.13e-12,10;UBERON:0000947,2.17e-10,21;UBERON:0010191,2.17e-10,21;UBERON:0004573,5.33e-10,33;UBERON:0004571,5.33e-10,33;UBERON:0005631,2.60e-09,14;UBERON:0000158,2.60e-09,14;UBERON:0001135,1.23e-08,15;UBERON:0005933,4.69e-08,2;UBERON:0005942,4.69e-08,2;UBERON:0005932,4.69e-08,2;UBERON:0002456,7.52e-08,2;UBERON:0001637,7.66e-08,42;UBERON:0003509,7.66e-08,42;UBERON:0004572,7.66e-08,42;UBERON:0005629,8.04e-08,2;UBERON:0005358,8.04e-08,2;UBERON:0001886,8.04e-08,2;UBERON:0004086,8.04e-08,2;UBERON:0005282,8.04e-08,2;UBERON:0005281,8.04e-08,2 | |||
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|short_description=p@chr9:119160527..119160548,+ | |short_description=p@chr9:119160527..119160548,+ | ||
}} | }} |
Latest revision as of 22:13, 31 July 2015
Short description: | p@chr9:119160527..119160548, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:119160527..119160548, + |
Coexpression cluster: | C776_chorionic_placenta_Smooth_Aortic_Fibroblast_leiomyoma_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.54e-19 | 3 |
aortic smooth muscle cell | 1.13e-12 | 10 |
outer root sheath cell | 4.69e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 7.52e-08 | 2 |
fibroblast of choroid plexus | 8.04e-08 | 2 |
vascular associated smooth muscle cell | 6.53e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.54e-19 | 3 |
chorion | 4.96e-18 | 7 |
blood vessel smooth muscle | 1.13e-12 | 10 |
arterial system smooth muscle | 1.13e-12 | 10 |
artery smooth muscle tissue | 1.13e-12 | 10 |
aorta smooth muscle tissue | 1.13e-12 | 10 |
aorta | 2.17e-10 | 21 |
aortic system | 2.17e-10 | 21 |
systemic artery | 5.33e-10 | 33 |
systemic arterial system | 5.33e-10 | 33 |
extraembryonic membrane | 2.60e-09 | 14 |
membranous layer | 2.60e-09 | 14 |
smooth muscle tissue | 1.23e-08 | 15 |
hair root sheath | 4.69e-08 | 2 |
hair outer root sheath | 4.69e-08 | 2 |
bulb of hair follicle | 4.69e-08 | 2 |
internal thoracic artery | 7.52e-08 | 2 |
artery | 7.66e-08 | 42 |
arterial blood vessel | 7.66e-08 | 42 |
arterial system | 7.66e-08 | 42 |
vascular plexus | 8.04e-08 | 2 |
ventricle of nervous system | 8.04e-08 | 2 |
choroid plexus | 8.04e-08 | 2 |
brain ventricle | 8.04e-08 | 2 |
ventricular system of brain | 8.04e-08 | 2 |
ventricular system of central nervous system | 8.04e-08 | 2 |