FFCP PHASE1:Hg19::chr9:137217884..137217916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:137217884..137217916,- | |||
|coexpression_cluster_id=C2404 | |||
|description=CAGE_peak_at_chr9:137217884..137217916,- | |description=CAGE_peak_at_chr9:137217884..137217916,- | ||
|id=chr9:137217884..137217916,- | |id=chr9:137217884..137217916,- | ||
|ontology_enrichment_celltype=CL:0002057!2.35e-26!42;CL:0000860!4.78e-26!45;CL:0000766!2.91e-22!76;CL:0000839!9.83e-19!70;CL:0000557!3.89e-18!71;CL:0002009!5.23e-18!65;CL:0002194!3.49e-17!63;CL:0000576!3.49e-17!63;CL:0000040!3.49e-17!63;CL:0000559!3.49e-17!63;CL:0000763!7.58e-16!112;CL:0000049!7.58e-16!112;CL:0000738!3.85e-11!140;CL:0000037!3.49e-09!172;CL:0000566!3.49e-09!172;CL:0002031!1.39e-08!124;CL:0000988!3.10e-08!182;CL:0002032!3.38e-08!165;CL:0000837!3.38e-08!165;CL:0002087!1.97e-07!119 | |ontology_enrichment_celltype=CL:0002057!2.35e-26!42;CL:0000860!4.78e-26!45;CL:0000766!2.91e-22!76;CL:0000839!9.83e-19!70;CL:0000557!3.89e-18!71;CL:0002009!5.23e-18!65;CL:0002194!3.49e-17!63;CL:0000576!3.49e-17!63;CL:0000040!3.49e-17!63;CL:0000559!3.49e-17!63;CL:0000763!7.58e-16!112;CL:0000049!7.58e-16!112;CL:0000738!3.85e-11!140;CL:0000037!3.49e-09!172;CL:0000566!3.49e-09!172;CL:0002031!1.39e-08!124;CL:0000988!3.10e-08!182;CL:0002032!3.38e-08!165;CL:0000837!3.38e-08!165;CL:0002087!1.97e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-28;33!CL:0002057;2.28e-28;33!CL:0000576;1.89e-19;48!CL:0000473;2.99e-19;39!CL:0000234;2.99e-19;39!CL:0000766;2.73e-15;69!CL:0000763;6.37e-08;100!CL:0000094;1.08e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.96e-37,42;CL:0002057,1.96e-37,42;CL:0000473,1.75e-31,48;CL:0000234,1.75e-31,48;CL:0000766,5.84e-31,72;CL:0000839,8.05e-26,66;CL:0000557,1.91e-25,67;CL:0002009,5.26e-25,61;CL:0002194,8.31e-24,59;CL:0000576,8.31e-24,59;CL:0000040,8.31e-24,59;CL:0000559,8.31e-24,59;CL:0000738,3.49e-23,136;CL:0000763,2.25e-22,108;CL:0000049,2.25e-22,108;CL:0000037,2.30e-19,168;CL:0002031,1.49e-18,120;CL:0000988,2.26e-18,177;CL:0002032,1.22e-17,161;CL:0000837,1.22e-17,161;CL:0002087,1.14e-16,115;CL:0002393,8.74e-08,9;CL:0002397,8.74e-08,9;CL:0000094,9.53e-08,8;CL:0002320,4.66e-07,361;CL:0000134,7.96e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.14e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!7.15e-16!86;UBERON:0002371!9.33e-16!80;UBERON:0002390!1.09e-14!102;UBERON:0003061!1.09e-14!102;UBERON:0002405!2.19e-13!115;UBERON:0002193!2.97e-12!112;UBERON:0004765!3.54e-12!101;UBERON:0001434!3.54e-12!101 | |ontology_enrichment_uberon=UBERON:0001474!7.15e-16!86;UBERON:0002371!9.33e-16!80;UBERON:0002390!1.09e-14!102;UBERON:0003061!1.09e-14!102;UBERON:0002405!2.19e-13!115;UBERON:0002193!2.97e-12!112;UBERON:0004765!3.54e-12!101;UBERON:0001434!3.54e-12!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.33e-22,82;UBERON:0002371,5.68e-22,76;UBERON:0002390,1.23e-21,98;UBERON:0003061,1.23e-21,98;UBERON:0004765,3.11e-20,90;UBERON:0002193,4.01e-18,108;UBERON:0002405,2.00e-16,93;UBERON:0001434,4.68e-16,100;UBERON:0003081,1.59e-09,203 | |||
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| ||
|short_description=p@chr9:137217884..137217916,- | |short_description=p@chr9:137217884..137217916,- | ||
}} | }} |
Latest revision as of 00:02, 1 August 2015
Short description: | p@chr9:137217884..137217916, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137217884..137217916, - |
Coexpression cluster: | C2404_CD14_Mast_Eosinophils_Neutrophils_Mesenchymal_Basophils_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.96e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-37 | 42 |
defensive cell | 1.75e-31 | 48 |
phagocyte | 1.75e-31 | 48 |
myeloid leukocyte | 5.84e-31 | 72 |
myeloid lineage restricted progenitor cell | 8.05e-26 | 66 |
granulocyte monocyte progenitor cell | 1.91e-25 | 67 |
macrophage dendritic cell progenitor | 5.26e-25 | 61 |
monopoietic cell | 8.31e-24 | 59 |
monocyte | 8.31e-24 | 59 |
monoblast | 8.31e-24 | 59 |
promonocyte | 8.31e-24 | 59 |
leukocyte | 3.49e-23 | 136 |
myeloid cell | 2.25e-22 | 108 |
common myeloid progenitor | 2.25e-22 | 108 |
hematopoietic stem cell | 2.30e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.49e-18 | 120 |
hematopoietic cell | 2.26e-18 | 177 |
hematopoietic oligopotent progenitor cell | 1.22e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-17 | 161 |
nongranular leukocyte | 1.14e-16 | 115 |
intermediate monocyte | 8.74e-08 | 9 |
CD14-positive, CD16-positive monocyte | 8.74e-08 | 9 |
granulocyte | 9.53e-08 | 8 |
connective tissue cell | 4.66e-07 | 361 |
mesenchymal cell | 7.96e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.33e-22 | 82 |
bone marrow | 5.68e-22 | 76 |
hematopoietic system | 1.23e-21 | 98 |
blood island | 1.23e-21 | 98 |
skeletal element | 3.11e-20 | 90 |
hemolymphoid system | 4.01e-18 | 108 |
immune system | 2.00e-16 | 93 |
skeletal system | 4.68e-16 | 100 |
lateral plate mesoderm | 1.59e-09 | 203 |