FFCP PHASE1:Hg19::chr9:38170884..38170888,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:38170884..38170888,- | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr9:38170884..38170888,- | |description=CAGE_peak_at_chr9:38170884..38170888,- | ||
|id=chr9:38170884..38170888,- | |id=chr9:38170884..38170888,- | ||
|ontology_enrichment_celltype=CL:0002057!3.23e-23!42;CL:0000860!2.21e-21!45;CL:0002194!8.87e-14!63;CL:0000576!8.87e-14!63;CL:0000040!8.87e-14!63;CL:0000559!8.87e-14!63;CL:0002009!3.09e-13!65;CL:0000839!5.15e-12!70;CL:0000557!8.61e-12!71;CL:0000766!9.19e-11!76;CL:0000763!6.66e-08!112;CL:0000049!6.66e-08!112 | |ontology_enrichment_celltype=CL:0002057!3.23e-23!42;CL:0000860!2.21e-21!45;CL:0002194!8.87e-14!63;CL:0000576!8.87e-14!63;CL:0000040!8.87e-14!63;CL:0000559!8.87e-14!63;CL:0002009!3.09e-13!65;CL:0000839!5.15e-12!70;CL:0000557!8.61e-12!71;CL:0000766!9.19e-11!76;CL:0000763!6.66e-08!112;CL:0000049!6.66e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-34;33!CL:0002057;2.43e-34;33!CL:0000473;7.57e-26;39!CL:0000234;7.57e-26;39!CL:0000576;1.53e-14;48!CL:0000766;3.17e-10;69!CL:0002087;9.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.33e-28,42;CL:0002057,1.33e-28,42;CL:0000473,6.02e-25,48;CL:0000234,6.02e-25,48;CL:0002194,8.04e-20,59;CL:0000576,8.04e-20,59;CL:0000040,8.04e-20,59;CL:0000559,8.04e-20,59;CL:0002009,3.69e-19,61;CL:0000839,1.13e-17,66;CL:0000557,2.10e-17,67;CL:0000766,3.67e-16,72;CL:0000763,1.47e-10,108;CL:0000049,1.47e-10,108;CL:0002087,7.16e-10,115;CL:0002031,1.99e-09,120;CL:0000738,3.18e-08,136;CL:0002032,8.17e-07,161;CL:0000837,8.17e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-17;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;7.79e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.93e-10!80;UBERON:0002390!4.29e-09!102;UBERON:0003061!4.29e-09!102;UBERON:0001474!4.53e-09!86;UBERON:0002193!6.62e-08!112;UBERON:0002405!1.52e-07!115;UBERON:0004765!3.57e-07!101;UBERON:0001434!3.57e-07!101;UBERON:0005631!6.78e-07!14;UBERON:0000158!6.78e-07!14 | |ontology_enrichment_uberon=UBERON:0002371!4.93e-10!80;UBERON:0002390!4.29e-09!102;UBERON:0003061!4.29e-09!102;UBERON:0001474!4.53e-09!86;UBERON:0002193!6.62e-08!112;UBERON:0002405!1.52e-07!115;UBERON:0004765!3.57e-07!101;UBERON:0001434!3.57e-07!101;UBERON:0005631!6.78e-07!14;UBERON:0000158!6.78e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.79e-09;2!UBERON:0002173;7.79e-09;2!UBERON:0002186;7.79e-09;2!UBERON:0005631;4.39e-07;10!UBERON:0000158;4.39e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.78e-15,76;UBERON:0001474,4.02e-14,82;UBERON:0004765,8.22e-13,90;UBERON:0002405,2.24e-12,93;UBERON:0002390,1.04e-11,98;UBERON:0003061,1.04e-11,98;UBERON:0001434,1.84e-11,100;UBERON:0002193,1.47e-10,108;UBERON:0004903,8.74e-09,2;UBERON:0002173,8.74e-09,2;UBERON:0002186,8.74e-09,2 | |||
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|short_description=p@chr9:38170884..38170888,- | |short_description=p@chr9:38170884..38170888,- | ||
}} | }} |
Latest revision as of 02:03, 1 August 2015
Short description: | p@chr9:38170884..38170888, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:38170884..38170888, - |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.33e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-28 | 42 |
defensive cell | 6.02e-25 | 48 |
phagocyte | 6.02e-25 | 48 |
monopoietic cell | 8.04e-20 | 59 |
monocyte | 8.04e-20 | 59 |
monoblast | 8.04e-20 | 59 |
promonocyte | 8.04e-20 | 59 |
macrophage dendritic cell progenitor | 3.69e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.13e-17 | 66 |
granulocyte monocyte progenitor cell | 2.10e-17 | 67 |
myeloid leukocyte | 3.67e-16 | 72 |
myeloid cell | 1.47e-10 | 108 |
common myeloid progenitor | 1.47e-10 | 108 |
nongranular leukocyte | 7.16e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.99e-09 | 120 |
leukocyte | 3.18e-08 | 136 |
hematopoietic oligopotent progenitor cell | 8.17e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.17e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.78e-15 | 76 |
bone element | 4.02e-14 | 82 |
skeletal element | 8.22e-13 | 90 |
immune system | 2.24e-12 | 93 |
hematopoietic system | 1.04e-11 | 98 |
blood island | 1.04e-11 | 98 |
skeletal system | 1.84e-11 | 100 |
hemolymphoid system | 1.47e-10 | 108 |
bronchoalveolar duct junction | 8.74e-09 | 2 |
alveolar duct | 8.74e-09 | 2 |
bronchiole | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.74e-09 | 2 |