FFCP PHASE1:Hg19::chrX:102631233..102631245,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=27018 | |EntrezGene=entrezgene:27018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=13388 | |HGNC=HGNC:13388 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q00994 | |UniProt=uniprot:Q00994 | ||
|association_with_transcript=-22bp_to_ENST00000361298,NM_206915,NM_206917,uc004ekh.2,uc004eki.2_5end | |association_with_transcript=-22bp_to_ENST00000361298,NM_206915,NM_206917,uc004ekh.2,uc004eki.2_5end | ||
|cluster_id=chrX:102631233..102631245,+ | |||
|description=CAGE_peak_6_at_NGFRAP1_5end | |description=CAGE_peak_6_at_NGFRAP1_5end | ||
|id=chrX:102631233..102631245,+ | |id=chrX:102631233..102631245,+ |
Revision as of 04:33, 1 August 2015
Short description: | p6@NGFRAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NGFRAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000361298, NM_206915, NM_206917, uc004ekh.2, uc004eki.2_5end |
EntrezGene: | 27018 |
HGNC: | 13388 |
UniProt: | Q00994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@NGFRAP1 |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.54e-10 | 5 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
neural plate | 9.86e-17 | 82 |
presumptive neural plate | 9.86e-17 | 82 |
neurectoderm | 1.79e-15 | 86 |
pre-chordal neural plate | 1.04e-13 | 61 |
ecto-epithelium | 5.57e-13 | 104 |
neural tube | 7.06e-13 | 56 |
neural rod | 7.06e-13 | 56 |
future spinal cord | 7.06e-13 | 56 |
neural keel | 7.06e-13 | 56 |
regional part of nervous system | 1.47e-12 | 53 |
Showing 1 to 10 of 51 entries