FFCP PHASE1:Mm9::chr16:44558890..44558912,-: Difference between revisions
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{{FFCP|EntrezGene=117606|HGNC=|UniProt=Q6AZB0|association_with_transcript=70bp_to_ENSMUST00000023370,NM_172506,uc007zhl.1,uc007zhm.1,uc007zhn.1_5end|description=CAGE_peak_4_at_Boc_5end|id=chr16:44558890..44558912,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,4.77e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!5.18e-12!94;UBERON:0004121!1.71e-11!102;UBERON:0000924!1.71e-11!102;UBERON:0006601!1.71e-11!102;UBERON:0000033!4.67e-11!63;UBERON:0002346!1.56e-10!71;UBERON:0003075!1.56e-10!71;UBERON:0007284!1.56e-10!71;UBERON:0007811!6.55e-10!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0001049!1.32e-09!52;UBERON:0005068!1.32e-09!52;UBERON:0006241!1.32e-09!52;UBERON:0007135!1.32e-09!52;UBERON:0003056!3.37e-09!49;UBERON:0001017!4.81e-08!73;UBERON:0005743!4.81e-08!73;UBERON:0002020!4.91e-08!34;UBERON:0002616!8.26e-08!49;UBERON:0000073!1.90e-07!75;UBERON:0001016!1.90e-07!75;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002619!2.82e-07!17;UBERON:0000468!2.86e-07!333;UBERON:0002791!3.22e-07!29;UBERON:0003528!3.22e-07!29;UBERON:0001893!3.22e-07!29;UBERON:0002780!6.46e-07!39;UBERON:0001890!6.46e-07!39;UBERON:0006240!6.46e-07!39;UBERON:0003080!8.09e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.55e-13,21;UBERON:0001869,5.55e-13,21;UBERON:0000203,5.55e-13,21;UBERON:0002619,1.89e-08,17;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0002020,1.71e-07,34|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0.782391344348039,1.96222640742402,2.19686182734472,3.88859798148567,0.55994568650145,7.18762821824858,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.41621522601718,2.11596391708813,0.633831403506179,0,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,7.98410014775278,6.75029691658453,5.67877395648731,0.856952953211411,0.662605622854841,1.71487118900936,1.91690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.569486723196412,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,1.13236794963186,0.441683036920787,0,0,4.09893115816166,2.51336048176146,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,1.68353484709179,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,3.05851974148158,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,1.4255592949172,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.32643988239339,0.162964976442026,1.18821560042632,0.234690248288502,0.670025029767263,0.476087281772027,1.75620283072019,0.630540576424764,0.8858587585951,0.797273843287435,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,1.10374698521893,0.642202359951168,0.468846746368813,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,1.58018378967908,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.469343416127421,0,0.220528398054962,0.32977250588296,2.09903754704677,0.603129249281559,0.716234064018819,0.492422699235184,0.874442509889552,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.34864346384821,1.23980183588004,1.83229159388821,0.518459893167171,0.621339313086926,0,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:117606 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6AZB0 | |||
|association_with_transcript=70bp_to_ENSMUST00000023370,NM_172506,uc007zhl.1,uc007zhm.1,uc007zhn.1_5end | |||
|cluster_id=chr16:44558890..44558912,- | |||
|description=CAGE_peak_4_at_Boc_5end | |||
|id=chr16:44558890..44558912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.77e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.18e-12!94;UBERON:0004121!1.71e-11!102;UBERON:0000924!1.71e-11!102;UBERON:0006601!1.71e-11!102;UBERON:0000033!4.67e-11!63;UBERON:0002346!1.56e-10!71;UBERON:0003075!1.56e-10!71;UBERON:0007284!1.56e-10!71;UBERON:0007811!6.55e-10!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0001049!1.32e-09!52;UBERON:0005068!1.32e-09!52;UBERON:0006241!1.32e-09!52;UBERON:0007135!1.32e-09!52;UBERON:0003056!3.37e-09!49;UBERON:0001017!4.81e-08!73;UBERON:0005743!4.81e-08!73;UBERON:0002020!4.91e-08!34;UBERON:0002616!8.26e-08!49;UBERON:0000073!1.90e-07!75;UBERON:0001016!1.90e-07!75;UBERON:0000955!2.63e-07!50;UBERON:0006238!2.63e-07!50;UBERON:0002619!2.82e-07!17;UBERON:0000468!2.86e-07!333;UBERON:0002791!3.22e-07!29;UBERON:0003528!3.22e-07!29;UBERON:0001893!3.22e-07!29;UBERON:0002780!6.46e-07!39;UBERON:0001890!6.46e-07!39;UBERON:0006240!6.46e-07!39;UBERON:0003080!8.09e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.55e-13,21;UBERON:0001869,5.55e-13,21;UBERON:0000203,5.55e-13,21;UBERON:0002619,1.89e-08,17;UBERON:0003528,3.03e-08,29;UBERON:0002791,3.03e-08,29;UBERON:0001893,3.03e-08,29;UBERON:0002020,1.71e-07,34 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,1.00717454380462,0.608261587317087,0.367093504323363,0.782391344348039,1.96222640742402,2.19686182734472,3.88859798148567,0.55994568650145,7.18762821824858,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.41621522601718,2.11596391708813,0.633831403506179,0,0.889294796111139,0,0,0,0.898800331555214,1.53687322128622,7.98410014775278,6.75029691658453,5.67877395648731,0.856952953211411,0.662605622854841,1.71487118900936,1.91690942036473,0.919218786610021,0,0.127687338085188,0.307213066512487,0.923204014111357,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0.569486723196412,1.4911955666024,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.26759077799012,0,0,0,0,0.253359865475099,0,0.22836775943812,0,1.03909497345377,0.520455980298408,0,0.461230994512117,0.150722640552623,0.470354828542819,0.376999773989026,0.247194967734374,0.144599356919912,0,1.13236794963186,0.441683036920787,0,0,4.09893115816166,2.51336048176146,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,1.04294592115366,0.767146371990992,0.20778804455956,0,1.12023300235348,0.373220911830279,0.252722758433675,1.68353484709179,1.30120442962704,0.919608417733892,0.360124259610698,0.753524089178575,0.816437989815934,0.768682321709099,0.749613796477831,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,1.09597866213787,3.05851974148158,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,0.414251545071004,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.92614151141356,0,0,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.799739588268102,0,1.4255592949172,0.387904974335251,0.350679099451593,0.189709611372772,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.32643988239339,0.162964976442026,1.18821560042632,0.234690248288502,0.670025029767263,0.476087281772027,1.75620283072019,0.630540576424764,0.8858587585951,0.797273843287435,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,1.10374698521893,0.642202359951168,0.468846746368813,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.141940085208269,0.35613120733451,1.62886959353576,0.659880491890142,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,1.58018378967908,0,0,0.340439605753788,0.540183282093931,0.905510786479282,0.214337035031592,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0.469343416127421,0,0.220528398054962,0.32977250588296,2.09903754704677,0.603129249281559,0.716234064018819,0.492422699235184,0.874442509889552,0.370850604021019,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.34864346384821,1.23980183588004,1.83229159388821,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.506868376472335,0.234714477291508,0.2604087696879,0.419437377702843,0,0,0,2.8381530140623,2.56777392912068,1.03936658382236,2.50637373934474,0.39736270956253,0.600977247599844,0.590758108698309,0.605798699688886,0.762068066549998,0.907435666231565,0.877120926657772,1.05833025804362,1.16876902181569,3.62768613784338,0,0,0,2.12508553435409,1.31377732815827,0.183151624267265,0.428736758158132,0,1.12950368523413,0,2.29158205375759,2.57779773515531,0.685082519770642,1.5107877947794,1.35004500046361,0.900642406448441,1.35942722695261,1.55328093525546,1.03787347584177,1.59609949360412,2.73173769206615,1.70174701947806,0.838452650511929,0.183843508450014,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.754505365544305,0.468207537349412,0.256100609619477,0.746661096422973,0.476293691283074,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,1.03520318456864,0.507687647350059,0.73171189149109,0.789209134313529,0.271608227691724,0,0.593175090620871,0.394017929502254,0,0.464810523557898,0.578719832943424,1.24905288968973,0.233931608445408,1.28922632428979,1.91288332068843,0.441182838239031,1.39120701372253 | |||
|short_description=p4@Boc | |||
}} |
Revision as of 20:12, 3 August 2015
Short description: | p4@Boc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Boc_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENSMUST00000023370, NM_172506, uc007zhl.1, uc007zhm.1, uc007zhn.1_5end |
EntrezGene: | 117606 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.77e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.55e-13 | 21 |
cerebral hemisphere | 5.55e-13 | 21 |
pallium | 5.55e-13 | 21 |
regional part of cerebral cortex | 1.89e-08 | 17 |
brain grey matter | 3.03e-08 | 29 |
regional part of telencephalon | 3.03e-08 | 29 |
telencephalon | 3.03e-08 | 29 |
gray matter | 1.71e-07 | 34 |