FFCP PHASE1:Mm9::chr7:108241389..108241396,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:108241389..108241396,+ | |||
|description=CAGE_peak_at_chr7:108241389..108241396,+ | |description=CAGE_peak_at_chr7:108241389..108241396,+ | ||
|id=chr7:108241389..108241396,+ | |id=chr7:108241389..108241396,+ | ||
|ontology_enrichment_celltype=CL:0000542!4.00e-10!13;CL:0000051!4.00e-10!13;CL:0000084!6.32e-10!11;CL:0000827!6.32e-10!11;CL:0000988!3.39e-09!32;CL:0002032!3.39e-09!32;CL:0000037!3.39e-09!32;CL:0000566!3.39e-09!32;CL:0000837!3.39e-09!32;CL:0000838!5.81e-09!12;CL:0002031!5.48e-08!25;CL:0000738!2.72e-07!17;CL:0002087!2.72e-07!17;CL:0000791!5.60e-07!9;CL:0000789!5.60e-07!9;CL:0002420!5.60e-07!9;CL:0002419!5.60e-07!9;CL:0000790!5.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.12e-10,1;CL:0000084,1.69e-08,11;CL:0000827,1.69e-08,11;CL:0000838,7.70e-08,12;CL:0000542,2.79e-07,13;CL:0000051,2.79e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.69e-24!23;UBERON:0000974!5.69e-24!23;UBERON:0004807!5.69e-24!23;UBERON:0005058!5.69e-24!23;UBERON:0003351!5.69e-24!23;UBERON:0009113!5.69e-24!23;UBERON:0003295!5.69e-24!23;UBERON:0009722!5.69e-24!23;UBERON:0005562!5.69e-24!23;UBERON:0007690!5.69e-24!23;UBERON:0006562!9.42e-23!24;UBERON:0003408!9.42e-23!24;UBERON:0001557!9.42e-23!24;UBERON:0001042!9.42e-23!24;UBERON:0008814!9.42e-23!24;UBERON:0009145!9.42e-23!24;UBERON:0002193!1.86e-20!48;UBERON:0004177!4.93e-20!29;UBERON:0000072!1.22e-19!27;UBERON:0002390!1.55e-18!45;UBERON:0003061!1.55e-18!45;UBERON:0000063!1.72e-15!35;UBERON:0002405!4.40e-14!70;UBERON:0000065!1.61e-12!41;UBERON:0001004!4.24e-12!42;UBERON:0003081!1.71e-11!88;UBERON:0005057!2.03e-11!51;UBERON:0003929!4.31e-09!55;UBERON:0002368!8.28e-09!60;UBERON:0002530!1.02e-07!65;UBERON:0000490!1.69e-07!66;UBERON:0005911!5.61e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.37e-15,23;UBERON:0000974,2.37e-15,23;UBERON:0004807,2.37e-15,23;UBERON:0005058,2.37e-15,23;UBERON:0003351,2.37e-15,23;UBERON:0009113,2.37e-15,23;UBERON:0003295,2.37e-15,23;UBERON:0009722,2.37e-15,23;UBERON:0005562,2.37e-15,23;UBERON:0007690,2.37e-15,23;UBERON:0006562,1.03e-14,24;UBERON:0003408,1.03e-14,24;UBERON:0001557,1.03e-14,24;UBERON:0001042,1.03e-14,24;UBERON:0008814,1.03e-14,24;UBERON:0009145,1.03e-14,24;UBERON:0000072,4.43e-13,27;UBERON:0004177,3.54e-12,29;UBERON:0005057,3.54e-12,29;UBERON:0000029,2.90e-11,1;UBERON:0001097,2.90e-11,1;UBERON:0003968,2.90e-11,1;UBERON:0001467,2.90e-11,1;UBERON:0000077,4.39e-10,35;UBERON:0002193,6.81e-10,48;UBERON:0002405,6.81e-10,48;UBERON:0007811,8.40e-10,36;UBERON:0000065,1.35e-08,41;UBERON:0001004,2.17e-08,42;UBERON:0000153,3.42e-08,43;UBERON:0002390,8.00e-08,45;UBERON:0003061,8.00e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.468129052643987,0,0,1.54080656938085,0.874204024189974,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.595745707205312,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,1.23253148597793,0.389762468933385,0.716106782669926,0.993406773906324,0.721172697119813,0.886137163047463,1.00966449948148,1.06689529317,0.806609481094724,0.877120926657772,1.6356013078856,1.8700304349051,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.468129052643987,0,0,1.54080656938085,0.874204024189974,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0.595745707205312,1.04479915655574,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.55362730188303,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.608175645870493,1.23253148597793,0.389762468933385,0.716106782669926,0.993406773906324,0.721172697119813,0.886137163047463,1.00966449948148,1.06689529317,0.806609481094724,0.877120926657772,1.6356013078856,1.8700304349051,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr7:108241389..108241396,+ | |short_description=p@chr7:108241389..108241396,+ | ||
}} | }} |
Latest revision as of 22:09, 3 August 2015
Short description: | p@chr7:108241389..108241396, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:108241389..108241396, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.12e-10 | 1 |
T cell | 1.69e-08 | 11 |
pro-T cell | 1.69e-08 | 11 |
lymphoid lineage restricted progenitor cell | 7.70e-08 | 12 |
lymphocyte | 2.79e-07 | 13 |
common lymphoid progenitor | 2.79e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.37e-15 | 23 |
neck | 2.37e-15 | 23 |
respiratory system epithelium | 2.37e-15 | 23 |
hemolymphoid system gland | 2.37e-15 | 23 |
pharyngeal epithelium | 2.37e-15 | 23 |
thymic region | 2.37e-15 | 23 |
pharyngeal gland | 2.37e-15 | 23 |
entire pharyngeal arch endoderm | 2.37e-15 | 23 |
thymus primordium | 2.37e-15 | 23 |
early pharyngeal endoderm | 2.37e-15 | 23 |
pharynx | 1.03e-14 | 24 |
gland of gut | 1.03e-14 | 24 |
upper respiratory tract | 1.03e-14 | 24 |
chordate pharynx | 1.03e-14 | 24 |
pharyngeal arch system | 1.03e-14 | 24 |
pharyngeal region of foregut | 1.03e-14 | 24 |
segment of respiratory tract | 4.43e-13 | 27 |
hemopoietic organ | 3.54e-12 | 29 |
immune organ | 3.54e-12 | 29 |
lymph node | 2.90e-11 | 1 |
axillary lymph node | 2.90e-11 | 1 |
peripheral lymph node | 2.90e-11 | 1 |
shoulder | 2.90e-11 | 1 |
mixed endoderm/mesoderm-derived structure | 4.39e-10 | 35 |
hemolymphoid system | 6.81e-10 | 48 |
immune system | 6.81e-10 | 48 |
craniocervical region | 8.40e-10 | 36 |
respiratory tract | 1.35e-08 | 41 |
respiratory system | 2.17e-08 | 42 |
anterior region of body | 3.42e-08 | 43 |
hematopoietic system | 8.00e-08 | 45 |
blood island | 8.00e-08 | 45 |