FFCP PHASE1:Mm9::chr10:126958180..126958190,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |MCL_coexpression_id=8 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:126958180..126958190,- | |||
|description=CAGE_peak_at_chr10:126958180..126958190,- | |description=CAGE_peak_at_chr10:126958180..126958190,- | ||
|id=chr10:126958180..126958190,- | |id=chr10:126958180..126958190,- | ||
|ontology_enrichment_celltype=CL:0000181!8.19e-09!5;CL:0000417!8.19e-09!5;CL:0000668!8.19e-09!5;CL:0000412!8.19e-09!5;CL:0000182!8.19e-09!5 | |ontology_enrichment_celltype=CL:0000181!8.19e-09!5;CL:0000417!8.19e-09!5;CL:0000668!8.19e-09!5;CL:0000412!8.19e-09!5;CL:0000182!8.19e-09!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.20e-29,5;CL:0000057,6.88e-10,1;CL:0000632,6.88e-10,1;CL:0000223,1.78e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!7.25e-30!49;UBERON:0005173!7.25e-30!49;UBERON:0002417!7.25e-30!49;UBERON:0000916!7.25e-30!49;UBERON:0002107!4.83e-29!22;UBERON:0007499!4.83e-29!22;UBERON:0006925!4.83e-29!22;UBERON:0009497!4.83e-29!22;UBERON:0000015!4.83e-29!22;UBERON:0002423!4.83e-29!22;UBERON:0006235!4.83e-29!22;UBERON:0008835!4.83e-29!22;UBERON:0003894!4.83e-29!22;UBERON:0004161!4.83e-29!22;UBERON:0008836!4.83e-29!22;UBERON:0009854!1.37e-27!23;UBERON:0009856!1.37e-27!23;UBERON:0002365!4.90e-25!25;UBERON:0002330!4.90e-25!25;UBERON:0009569!1.68e-20!66;UBERON:0005256!3.72e-18!47;UBERON:0003914!1.48e-14!47;UBERON:0005177!1.78e-14!85;UBERON:0002368!7.05e-13!60;UBERON:0002530!7.09e-13!65;UBERON:0002100!1.05e-11!98;UBERON:0005057!1.81e-11!51;UBERON:0003929!2.56e-10!55;UBERON:0000949!6.87e-10!72;UBERON:0002113!3.35e-09!14;UBERON:0003918!3.35e-09!14;UBERON:0005095!3.35e-09!14;UBERON:0007687!3.35e-09!14;UBERON:0003104!5.82e-08!131;UBERON:0009142!5.82e-08!131;UBERON:0000490!6.88e-08!66;UBERON:0006554!6.97e-08!16;UBERON:0005911!2.30e-07!69;UBERON:0001008!2.43e-07!17;UBERON:0002405!3.36e-07!70;UBERON:0000466!7.19e-07!79 | |ontology_enrichment_uberon=UBERON:0005172!7.25e-30!49;UBERON:0005173!7.25e-30!49;UBERON:0002417!7.25e-30!49;UBERON:0000916!7.25e-30!49;UBERON:0002107!4.83e-29!22;UBERON:0007499!4.83e-29!22;UBERON:0006925!4.83e-29!22;UBERON:0009497!4.83e-29!22;UBERON:0000015!4.83e-29!22;UBERON:0002423!4.83e-29!22;UBERON:0006235!4.83e-29!22;UBERON:0008835!4.83e-29!22;UBERON:0003894!4.83e-29!22;UBERON:0004161!4.83e-29!22;UBERON:0008836!4.83e-29!22;UBERON:0009854!1.37e-27!23;UBERON:0009856!1.37e-27!23;UBERON:0002365!4.90e-25!25;UBERON:0002330!4.90e-25!25;UBERON:0009569!1.68e-20!66;UBERON:0005256!3.72e-18!47;UBERON:0003914!1.48e-14!47;UBERON:0005177!1.78e-14!85;UBERON:0002368!7.05e-13!60;UBERON:0002530!7.09e-13!65;UBERON:0002100!1.05e-11!98;UBERON:0005057!1.81e-11!51;UBERON:0003929!2.56e-10!55;UBERON:0000949!6.87e-10!72;UBERON:0002113!3.35e-09!14;UBERON:0003918!3.35e-09!14;UBERON:0005095!3.35e-09!14;UBERON:0007687!3.35e-09!14;UBERON:0003104!5.82e-08!131;UBERON:0009142!5.82e-08!131;UBERON:0000490!6.88e-08!66;UBERON:0006554!6.97e-08!16;UBERON:0005911!2.30e-07!69;UBERON:0001008!2.43e-07!17;UBERON:0002405!3.36e-07!70;UBERON:0000466!7.19e-07!79 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.65e-32,22;UBERON:0007499,5.65e-32,22;UBERON:0006925,5.65e-32,22;UBERON:0009497,5.65e-32,22;UBERON:0000015,5.65e-32,22;UBERON:0002423,5.65e-32,22;UBERON:0006235,5.65e-32,22;UBERON:0008835,5.65e-32,22;UBERON:0003894,5.65e-32,22;UBERON:0004161,5.65e-32,22;UBERON:0008836,5.65e-32,22;UBERON:0009854,1.42e-30,23;UBERON:0009856,1.42e-30,23;UBERON:0002365,4.15e-28,25;UBERON:0002330,4.15e-28,25;UBERON:0005256,4.66e-19,45;UBERON:0003914,3.14e-18,47;UBERON:0005172,1.81e-17,49;UBERON:0005173,1.81e-17,49;UBERON:0002417,1.81e-17,49;UBERON:0000916,1.81e-17,49;UBERON:0003104,6.02e-14,61;UBERON:0009142,6.02e-14,61;UBERON:0009569,7.46e-13,66;UBERON:0003929,1.43e-12,55;UBERON:0002368,1.75e-11,60;UBERON:0005177,1.18e-10,79;UBERON:0002530,1.46e-10,65;UBERON:0000490,2.15e-10,66;UBERON:0005911,6.42e-10,69;UBERON:0000949,1.75e-09,72;UBERON:0002100,2.78e-09,90;UBERON:0001041,1.77e-08,80;UBERON:0000025,3.40e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,4.31762553310254,5.84798775702902,2.68816132258401,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.590440591918409,0.627994911365499,0.370191491765402,5.03969466048153,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.936113019343682,3.53610429125956,2.51156378930677,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,4.31762553310254,5.84798775702902,2.68816132258401,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26361379216837,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.281105173679186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.590440591918409,0.627994911365499,0.370191491765402,5.03969466048153,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.763877555344259,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.936113019343682,3.53610429125956,2.51156378930677,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:126958180..126958190,- | |short_description=p@chr10:126958180..126958190,- | ||
}} | }} |
Latest revision as of 01:33, 4 August 2015
Short description: | p@chr10:126958180..126958190, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126958180..126958190, - |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.20e-29 | 5 |
fibroblast | 6.88e-10 | 1 |
hepatic stellate cell | 6.88e-10 | 1 |
endodermal cell | 1.78e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.65e-32 | 22 |
epithelial sac | 5.65e-32 | 22 |
digestive gland | 5.65e-32 | 22 |
epithelium of foregut-midgut junction | 5.65e-32 | 22 |
anatomical boundary | 5.65e-32 | 22 |
hepatobiliary system | 5.65e-32 | 22 |
foregut-midgut junction | 5.65e-32 | 22 |
hepatic diverticulum | 5.65e-32 | 22 |
liver primordium | 5.65e-32 | 22 |
septum transversum | 5.65e-32 | 22 |
liver bud | 5.65e-32 | 22 |
digestive tract diverticulum | 1.42e-30 | 23 |
sac | 1.42e-30 | 23 |
exocrine gland | 4.15e-28 | 25 |
exocrine system | 4.15e-28 | 25 |
trunk mesenchyme | 4.66e-19 | 45 |
epithelial tube | 3.14e-18 | 47 |
abdomen element | 1.81e-17 | 49 |
abdominal segment element | 1.81e-17 | 49 |
abdominal segment of trunk | 1.81e-17 | 49 |
abdomen | 1.81e-17 | 49 |
mesenchyme | 6.02e-14 | 61 |
entire embryonic mesenchyme | 6.02e-14 | 61 |
subdivision of trunk | 7.46e-13 | 66 |
gut epithelium | 1.43e-12 | 55 |
endocrine gland | 1.75e-11 | 60 |
trunk region element | 1.18e-10 | 79 |
gland | 1.46e-10 | 65 |
unilaminar epithelium | 2.15e-10 | 66 |
endo-epithelium | 6.42e-10 | 69 |
endocrine system | 1.75e-09 | 72 |
trunk | 2.78e-09 | 90 |
foregut | 1.77e-08 | 80 |
tube | 3.40e-07 | 114 |