FFCP PHASE1:Mm9::chr11:83395575..83395592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=194 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000141082_5end | |association_with_transcript=0bp_to_ENSMUST00000141082_5end | ||
|cluster_id=chr11:83395575..83395592,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000141082_5end | |description=CAGE_peak_1_at_ENSMUST00000141082_5end | ||
|id=chr11:83395575..83395592,+ | |id=chr11:83395575..83395592,+ | ||
|ontology_enrichment_celltype=CL:0000680!7.07e-09!6;CL:0000183!7.07e-09!6;CL:0000187!7.07e-09!6;CL:0000056!7.07e-09!6;CL:0000222!1.94e-07!7;CL:0000355!2.34e-07!9 | |ontology_enrichment_celltype=CL:0000680!7.07e-09!6;CL:0000183!7.07e-09!6;CL:0000187!7.07e-09!6;CL:0000056!7.07e-09!6;CL:0000222!1.94e-07!7;CL:0000355!2.34e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.31e-15,3;CL:0000359,2.31e-15,3;CL:0002539,2.31e-15,3;CL:0000514,2.31e-15,3;CL:0000680,1.57e-13,6;CL:0000187,1.57e-13,6;CL:0000056,1.57e-13,6;CL:0000222,1.24e-11,7;CL:0000355,4.25e-09,9;CL:0002293,3.09e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002329!2.11e-07!11;UBERON:0003077!2.11e-07!11;UBERON:0003059!2.11e-07!11;UBERON:0007282!2.11e-07!11;UBERON:0009618!2.11e-07!11;UBERON:0007285!2.11e-07!11;UBERON:0001134!2.34e-07!9;UBERON:0002036!2.34e-07!9;UBERON:0002385!2.34e-07!9;UBERON:0000486!2.34e-07!9;UBERON:0001015!2.34e-07!9;UBERON:0004290!2.34e-07!9;UBERON:0003082!2.34e-07!9 | |ontology_enrichment_uberon=UBERON:0002329!2.11e-07!11;UBERON:0003077!2.11e-07!11;UBERON:0003059!2.11e-07!11;UBERON:0007282!2.11e-07!11;UBERON:0009618!2.11e-07!11;UBERON:0007285!2.11e-07!11;UBERON:0001134!2.34e-07!9;UBERON:0002036!2.34e-07!9;UBERON:0002385!2.34e-07!9;UBERON:0000486!2.34e-07!9;UBERON:0001015!2.34e-07!9;UBERON:0004290!2.34e-07!9;UBERON:0003082!2.34e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.31e-15,3;UBERON:0004237,2.31e-15,3;UBERON:0004695,2.31e-15,3;UBERON:0002111,2.31e-15,3;UBERON:0004178,2.31e-15,3;UBERON:0000947,1.13e-11,4;UBERON:0001637,1.13e-11,4;UBERON:0004573,1.13e-11,4;UBERON:0003509,1.13e-11,4;UBERON:0004571,1.13e-11,4;UBERON:0010191,1.13e-11,4;UBERON:0004572,1.13e-11,4;UBERON:0000055,1.88e-09,5;UBERON:0007500,1.88e-09,5;UBERON:0001981,1.88e-09,5;UBERON:0002049,1.88e-09,5;UBERON:0007798,1.88e-09,5;UBERON:0004537,1.88e-09,5;UBERON:0006965,1.88e-09,5;UBERON:0001134,4.25e-09,9;UBERON:0002036,4.25e-09,9;UBERON:0002385,4.25e-09,9;UBERON:0000486,4.25e-09,9;UBERON:0007503,4.25e-09,9;UBERON:0001015,4.25e-09,9;UBERON:0002329,4.25e-09,9;UBERON:0003082,4.25e-09,9;UBERON:0003059,4.25e-09,9;UBERON:0007282,4.25e-09,9;UBERON:0004290,4.25e-09,9;UBERON:0009618,4.25e-09,9;UBERON:0000383,3.30e-08,10;UBERON:0007524,1.77e-07,11;UBERON:0003077,1.77e-07,11;UBERON:0007285,1.77e-07,11;UBERON:0000993,5.73e-07,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,2.02753862439029,1.65192076945513,0,0,0,0.194429899074283,0,0,0,0,0,3.34437266846731,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,4.26075806445144,2.33807404142582,3.18005617059306,0,11.5493829672886,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775809948670503,0.280543279561274,2.52946148497029,4.13308414342886,7.22194148070324,4.44229790118482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,15.7553494581178,0,0,66.1530193119867,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,4.34937519160848,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0,0.750729901804728,8.05867146775966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,2.02753862439029,1.65192076945513,0,0,0,0.194429899074283,0,0,0,0,0,3.34437266846731,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,4.26075806445144,2.33807404142582,3.18005617059306,0,11.5493829672886,5.09610479413291,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775809948670503,0.280543279561274,2.52946148497029,4.13308414342886,7.22194148070324,4.44229790118482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0.551873492609465,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,15.7553494581178,0,0,66.1530193119867,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0.492422699235184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,4.34937519160848,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0.316011120628178,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0,0.15241361331,0.302478555410522,0.584747284438515,0.192423683280659,0.116876902181569,0.453460767230423,0.221985953374065,0,0,0,0.750729901804728,8.05867146775966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000141082 | |short_description=p1@ENSMUST00000141082 | ||
}} | }} |
Latest revision as of 04:36, 4 August 2015
Short description: | p1@ENSMUST00000141082 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000141082_5end |
Coexpression cluster: | MCL_coexpression_mm9:194 |
Association with transcript: | 0bp_to_ENSMUST00000141082_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.31e-15 | 3 |
vascular associated smooth muscle cell | 2.31e-15 | 3 |
aortic smooth muscle cell | 2.31e-15 | 3 |
smooth muscle myoblast | 2.31e-15 | 3 |
muscle precursor cell | 1.57e-13 | 6 |
muscle cell | 1.57e-13 | 6 |
myoblast | 1.57e-13 | 6 |
mesodermal cell | 1.24e-11 | 7 |
multi-potent skeletal muscle stem cell | 4.25e-09 | 9 |
epithelial cell of thymus | 3.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.31e-15 | 3 |
blood vessel smooth muscle | 2.31e-15 | 3 |
arterial system smooth muscle | 2.31e-15 | 3 |
artery smooth muscle tissue | 2.31e-15 | 3 |
aorta smooth muscle tissue | 2.31e-15 | 3 |
aorta | 1.13e-11 | 4 |
artery | 1.13e-11 | 4 |
systemic artery | 1.13e-11 | 4 |
arterial blood vessel | 1.13e-11 | 4 |
systemic arterial system | 1.13e-11 | 4 |
aortic system | 1.13e-11 | 4 |
arterial system | 1.13e-11 | 4 |
vessel | 1.88e-09 | 5 |
epithelial tube open at both ends | 1.88e-09 | 5 |
blood vessel | 1.88e-09 | 5 |
vasculature | 1.88e-09 | 5 |
vascular system | 1.88e-09 | 5 |
blood vasculature | 1.88e-09 | 5 |
vascular cord | 1.88e-09 | 5 |
skeletal muscle tissue | 4.25e-09 | 9 |
striated muscle tissue | 4.25e-09 | 9 |
muscle tissue | 4.25e-09 | 9 |
multilaminar epithelium | 4.25e-09 | 9 |
epithelial vesicle | 4.25e-09 | 9 |
musculature | 4.25e-09 | 9 |
somite | 4.25e-09 | 9 |
myotome | 4.25e-09 | 9 |
presomitic mesoderm | 4.25e-09 | 9 |
presumptive segmental plate | 4.25e-09 | 9 |
dermomyotome | 4.25e-09 | 9 |
trunk paraxial mesoderm | 4.25e-09 | 9 |
musculature of body | 3.30e-08 | 10 |
dense mesenchyme tissue | 1.77e-07 | 11 |
paraxial mesoderm | 1.77e-07 | 11 |
presumptive paraxial mesoderm | 1.77e-07 | 11 |
oviduct | 5.73e-07 | 1 |