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FFCP PHASE1:Mm9::chr10:6373295..6373325,-: Difference between revisions

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{{FFCP|EntrezGene=270685|HGNC=|MCL_coexpression_id=68|UniProt=Q3V3R1|association_with_transcript=71bp_to_ENSMUST00000043735_5end|description=CAGE_peak_2_at_Mthfd1l_5end|id=chr10:6373295..6373325,-|ontology_enrichment_celltype=CL:0000988!1.75e-10!32;CL:0002032!1.75e-10!32;CL:0000037!1.75e-10!32;CL:0000566!1.75e-10!32;CL:0000837!1.75e-10!32;CL:0000542!5.30e-08!13;CL:0000051!5.30e-08!13;CL:0000838!9.83e-08!12;CL:0000034!2.24e-07!97;CL:0000084!2.29e-07!11;CL:0000827!2.29e-07!11;CL:0002031!5.06e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-10,32;CL:0002032,1.37e-10,32;CL:0000037,1.37e-10,32;CL:0000837,1.37e-10,32;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000838,7.70e-08,12;CL:0000034,1.26e-07,97;CL:0000084,1.82e-07,11;CL:0000827,1.82e-07,11;CL:0002031,4.48e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.10e-10!23;UBERON:0000974!7.10e-10!23;UBERON:0004807!7.10e-10!23;UBERON:0005058!7.10e-10!23;UBERON:0003351!7.10e-10!23;UBERON:0009113!7.10e-10!23;UBERON:0003295!7.10e-10!23;UBERON:0009722!7.10e-10!23;UBERON:0005562!7.10e-10!23;UBERON:0007690!7.10e-10!23;UBERON:0004177!1.27e-09!29;UBERON:0003408!3.16e-09!24;UBERON:0006562!7.57e-09!24;UBERON:0001557!7.57e-09!24;UBERON:0001042!7.57e-09!24;UBERON:0008814!7.57e-09!24;UBERON:0009145!7.57e-09!24;UBERON:0002390!7.21e-08!45;UBERON:0003061!7.21e-08!45;UBERON:0000072!1.60e-07!27;UBERON:0002193!4.60e-07!48;UBERON:0007811!7.57e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.24e-10,36;UBERON:0002370,5.12e-10,23;UBERON:0000974,5.12e-10,23;UBERON:0004807,5.12e-10,23;UBERON:0005058,5.12e-10,23;UBERON:0003351,5.12e-10,23;UBERON:0009113,5.12e-10,23;UBERON:0003295,5.12e-10,23;UBERON:0009722,5.12e-10,23;UBERON:0005562,5.12e-10,23;UBERON:0007690,5.12e-10,23;UBERON:0004177,9.23e-10,29;UBERON:0005057,9.23e-10,29;UBERON:0003408,2.33e-09,24;UBERON:0006562,5.55e-09,24;UBERON:0001557,5.55e-09,24;UBERON:0001042,5.55e-09,24;UBERON:0008814,5.55e-09,24;UBERON:0009145,5.55e-09,24;UBERON:0000153,1.54e-08,43;UBERON:0002390,7.70e-08,45;UBERON:0003061,7.70e-08,45;UBERON:0000072,1.24e-07,27;UBERON:0000077,3.00e-07,35;UBERON:0002193,4.93e-07,48;UBERON:0002405,4.93e-07,48|phase1_expression=2.88267924788629,0,0,0,0,1.6787927191189,2.10251376535973,8.39301602370246,50.261573808145,59.2183251594643,63.3506482434368,57.1168658406609,6.50562773738582,4.28359971853087,1.99865857089398,4.25198061518635,1.39912375625629,2.99689057090326,2.19383093769182,3.39511721438424,2.12608225377674,4.66667470644161,5.48519557191764,0.47997726838022,1.60586496747019,1.14846392823004,0.430761996159075,0.430942465371778,0.760093677825496,0.504060259519861,1.33038306393183,10.1604907753541,4.92051830067656,15.8481681015439,0.288851619751275,1.49611180822643,1.22501613757421,0.837063261473815,2.3440060335714,0.523523743973798,0,0.683045484958446,0,5.5394599909254,4.76471576731718,4.03802854755699,0,0.872100625521786,0.659058548203415,0,0.419959264876088,0,4.53013036355888,5.07753499407941,6.38578218370682,2.31533492432352,1.71920063963254,0.515672092277442,1.41621522601718,1.5869729378161,0,0.677689064138264,0.889294796111139,0.899899717281399,0,0.7104801149461,2.09720077362883,1.15265491596466,0.103689612308478,0.540023753326763,0.630974884054146,3.14216082844184,3.75476519617743,0.61245399607477,1.0543001812006,0,1.10115880999389,4.08599481872601,2.15049146558741,1.31886287730194,2.28719109006024,0.52091337055676,3.35019598801657,2.8138130501584,2.75036845998258,3.53554302568401,2.27794689278565,3.35519002485541,8.48133365331661,12.0158780569789,4.34796733052517,0,2.03991400112325,0,0,0,1.26399978118577,12.1005529030421,9.61208217030615,9.89350808628953,2.67602497575693,1.28326477414318,7.64415719119937,21.3320010945999,1.29894624606728,1.26679932737549,1.51657333504435,1.25602267690966,1.8125651855302,0.890652834388949,2.25530924795977,2.13125834818499,1.61430848079241,2.11011696773672,1.76383060703557,0.251333182659351,2.22475470960936,1.01219549843938,1.76922110389975,1.29413479957927,1.10420759230197,1.45462575940567,0,3.51336956413857,2.72280718857492,0.766371165625774,9.34557971146178,11.3981518888747,6.73472203487243,3.2953940669061,1.37250180845588,1.38219787324151,1.73824320192276,5.11430914660661,1.24672826735736,1.94689515681309,2.54598409625791,4.10543003013307,14.1524744722858,1.26265113531884,4.16385417480652,3.21862946206862,3.06105620669094,3.76762044589288,4.62648194229029,3.07472928683639,3.27956035959051,4.13925393182425,2.58681591519411,1.13463648100692,1.05570674498369,1.09597866213787,2.22437799380478,1.39300866608867,2.05782136407943,3.58261680273288,8.42655824775882,8.23513302767089,7.10408748488982,3.52113813310353,2.34526059981096,2.34080679899319,3.55117103377815,1.57411385397923,1.07986979021165,0.232533944750408,2.14618721119695,0.817357396570186,1.31647879930784,0.820837320395476,0.648550476366846,0.730999937126662,0.219550115291051,0.134206418760372,1.47202963994889,1.44066457330998,0,0.2644505666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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:270685
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=uniprot:Q3V3R1
|association_with_transcript=71bp_to_ENSMUST00000043735_5end
|cluster_id=chr10:6373295..6373325,-
|description=CAGE_peak_2_at_Mthfd1l_5end
|id=chr10:6373295..6373325,-
|ontology_enrichment_celltype=CL:0000988!1.75e-10!32;CL:0002032!1.75e-10!32;CL:0000037!1.75e-10!32;CL:0000566!1.75e-10!32;CL:0000837!1.75e-10!32;CL:0000542!5.30e-08!13;CL:0000051!5.30e-08!13;CL:0000838!9.83e-08!12;CL:0000034!2.24e-07!97;CL:0000084!2.29e-07!11;CL:0000827!2.29e-07!11;CL:0002031!5.06e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000988,1.37e-10,32;CL:0002032,1.37e-10,32;CL:0000037,1.37e-10,32;CL:0000837,1.37e-10,32;CL:0000542,4.11e-08,13;CL:0000051,4.11e-08,13;CL:0000838,7.70e-08,12;CL:0000034,1.26e-07,97;CL:0000084,1.82e-07,11;CL:0000827,1.82e-07,11;CL:0002031,4.48e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!7.10e-10!23;UBERON:0000974!7.10e-10!23;UBERON:0004807!7.10e-10!23;UBERON:0005058!7.10e-10!23;UBERON:0003351!7.10e-10!23;UBERON:0009113!7.10e-10!23;UBERON:0003295!7.10e-10!23;UBERON:0009722!7.10e-10!23;UBERON:0005562!7.10e-10!23;UBERON:0007690!7.10e-10!23;UBERON:0004177!1.27e-09!29;UBERON:0003408!3.16e-09!24;UBERON:0006562!7.57e-09!24;UBERON:0001557!7.57e-09!24;UBERON:0001042!7.57e-09!24;UBERON:0008814!7.57e-09!24;UBERON:0009145!7.57e-09!24;UBERON:0002390!7.21e-08!45;UBERON:0003061!7.21e-08!45;UBERON:0000072!1.60e-07!27;UBERON:0002193!4.60e-07!48;UBERON:0007811!7.57e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0007811,2.24e-10,36;UBERON:0002370,5.12e-10,23;UBERON:0000974,5.12e-10,23;UBERON:0004807,5.12e-10,23;UBERON:0005058,5.12e-10,23;UBERON:0003351,5.12e-10,23;UBERON:0009113,5.12e-10,23;UBERON:0003295,5.12e-10,23;UBERON:0009722,5.12e-10,23;UBERON:0005562,5.12e-10,23;UBERON:0007690,5.12e-10,23;UBERON:0004177,9.23e-10,29;UBERON:0005057,9.23e-10,29;UBERON:0003408,2.33e-09,24;UBERON:0006562,5.55e-09,24;UBERON:0001557,5.55e-09,24;UBERON:0001042,5.55e-09,24;UBERON:0008814,5.55e-09,24;UBERON:0009145,5.55e-09,24;UBERON:0000153,1.54e-08,43;UBERON:0002390,7.70e-08,45;UBERON:0003061,7.70e-08,45;UBERON:0000072,1.24e-07,27;UBERON:0000077,3.00e-07,35;UBERON:0002193,4.93e-07,48;UBERON:0002405,4.93e-07,48
|phase1_expression=2.88267924788629,0,0,0,0,1.6787927191189,2.10251376535973,8.39301602370246,50.261573808145,59.2183251594643,63.3506482434368,57.1168658406609,6.50562773738582,4.28359971853087,1.99865857089398,4.25198061518635,1.39912375625629,2.99689057090326,2.19383093769182,3.39511721438424,2.12608225377674,4.66667470644161,5.48519557191764,0.47997726838022,1.60586496747019,1.14846392823004,0.430761996159075,0.430942465371778,0.760093677825496,0.504060259519861,1.33038306393183,10.1604907753541,4.92051830067656,15.8481681015439,0.288851619751275,1.49611180822643,1.22501613757421,0.837063261473815,2.3440060335714,0.523523743973798,0,0.683045484958446,0,5.5394599909254,4.76471576731718,4.03802854755699,0,0.872100625521786,0.659058548203415,0,0.419959264876088,0,4.53013036355888,5.07753499407941,6.38578218370682,2.31533492432352,1.71920063963254,0.515672092277442,1.41621522601718,1.5869729378161,0,0.677689064138264,0.889294796111139,0.899899717281399,0,0.7104801149461,2.09720077362883,1.15265491596466,0.103689612308478,0.540023753326763,0.630974884054146,3.14216082844184,3.75476519617743,0.61245399607477,1.0543001812006,0,1.10115880999389,4.08599481872601,2.15049146558741,1.31886287730194,2.28719109006024,0.52091337055676,3.35019598801657,2.8138130501584,2.75036845998258,3.53554302568401,2.27794689278565,3.35519002485541,8.48133365331661,12.0158780569789,4.34796733052517,0,2.03991400112325,0,0,0,1.26399978118577,12.1005529030421,9.61208217030615,9.89350808628953,2.67602497575693,1.28326477414318,7.64415719119937,21.3320010945999,1.29894624606728,1.26679932737549,1.51657333504435,1.25602267690966,1.8125651855302,0.890652834388949,2.25530924795977,2.13125834818499,1.61430848079241,2.11011696773672,1.76383060703557,0.251333182659351,2.22475470960936,1.01219549843938,1.76922110389975,1.29413479957927,1.10420759230197,1.45462575940567,0,3.51336956413857,2.72280718857492,0.766371165625774,9.34557971146178,11.3981518888747,6.73472203487243,3.2953940669061,1.37250180845588,1.38219787324151,1.73824320192276,5.11430914660661,1.24672826735736,1.94689515681309,2.54598409625791,4.10543003013307,14.1524744722858,1.26265113531884,4.16385417480652,3.21862946206862,3.06105620669094,3.76762044589288,4.62648194229029,3.07472928683639,3.27956035959051,4.13925393182425,2.58681591519411,1.13463648100692,1.05570674498369,1.09597866213787,2.22437799380478,1.39300866608867,2.05782136407943,3.58261680273288,8.42655824775882,8.23513302767089,7.10408748488982,3.52113813310353,2.34526059981096,2.34080679899319,3.55117103377815,1.57411385397923,1.07986979021165,0.232533944750408,2.14618721119695,0.817357396570186,1.31647879930784,0.820837320395476,0.648550476366846,0.730999937126662,0.219550115291051,0.134206418760372,1.47202963994889,1.44066457330998,0,0.264450566663544,3.83918850963421,2.55460339046482,1.41754207454303,1.4117846723634,1.77902435075896,0.951128130562796,0,1.4822905925161,1.25667604400135,0.994782360205754,1.75467678407208,0.898819408654221,0.432276099749388,0.597423819763102,3.03468641524931,2.97046132785295,2.25415471346161,2.03651327845314,1.35766741017338,2.31448205638051,1.20149420536089,0.738050739898011,0,0.370191491765402,0.296452627087149,2.50267658574141,1.57247196090562,0.224862112384854,1.82574109249653,1.20588579876208,2.03700681425136,1.15078454980324,2.10775794807546,1.64736847912849,1.43768206527355,1.48856379067401,0.624075346229121,0,0.717589654087649,0.482443521363367,1.29327233116623,1.70542270593436,3.09633455239849,3.90413697282933,2.34690248288502,1.84256883185997,0.238043640886014,1.36593553500459,0.945810864637146,0.8858587585951,0.478364305972461,0.655453258862952,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0.275936746304732,3.21101179975584,2.46144541843627,8.36068221421045,0.252470927204373,7.88770548540642,3.12350995437311,5.60100834105277,5.4962823529087,5.34716817797746,7.07691326972081,6.47697122679831,4.38383786866968,6.32460444714438,2.24924921495265,1.41940085208269,2.13678724400706,2.76907830901079,0.989820737835213,0,3.39892890616974,1.81394134178851,1.50884063804718,1.18120757152309,2.15204603560749,4.65170927702798,1.81766864738753,1.78248689192361,1.58018378967908,0,0,0.340439605753788,3.78128297465751,2.45781499187234,1.50035924522115,0.886701168211368,1.42695054081656,1.97458824722545,2.43571959291679,1.40803024838226,0.42366414172764,1.32317038832977,2.96795255294664,1.93757312035087,3.5584625707612,2.86493625607528,3.61109979439135,1.1659233465194,2.59595422814714,1.87957968877638,2.06386867963222,2.22233432843654,2.26042148405629,2.59719032669948,2.97411625168479,11.2185763795945,12.7355821614529,11.8851977471804,0,2.21435195506795,2.43983360552218,0.972048067396211,1.25452977608681,1.31017538247707,2.29269388854195,2.56225712748541,0.523511883968059,0.777689839750757,1.24267862617385,2.81846469342095,1.64468200648377,1.82004339502807,2.91676782516071,2.19571699912143,1.68956125490778,1.87771581833206,2.73429208172295,2.51662426621706,2.17425708743405,2.30424005006292,7.58426689507628,4.45995473638361,2.56777392912068,3.50786222040047,5.37080087002444,3.77494574084403,4.32703618271888,4.72606486958647,3.43285929823702,6.32516495236499,4.2346997757473,3.80085734885034,3.75226182397285,3.3894301632655,0.453460767230423,1.33191572024439,4.03712354742641,2.18250001273302,0,1.12609485270709,0.549454872801795,1.07184189539533,0.501572104035363,6.7770221114048,10.1271552031579,5.72895513439397,5.32744865265431,2.74033007908257,3.7769694869485,4.72515750162264,5.40385443869065,4.07828168085784,4.14208249401456,1.97195960409936,1.19707462020309,1.53660245178721,1.94485373654635,0.838452650511929,0.919217542250071,1.55572709461131,0.618105171716683,2.24643446714271,2.02157769411038,1.52087579934144,2.64076877940507,1.40462261204824,0.704276676453562,1.20614484806788,1.90517476513229,1.73826488917283,1.15745532278223,1.64834360321323,1.47198920134397,0.685738504770831,0.887379030796687,1.1921809497366,1.0174249164263,1.88218760830661,0.507687647350059,1.82927972872773,1.31534855718921,1.22223702461276,1.12228454331548,1.77952527186261,0.886540341380071,2.45538625901814,1.54936841185966,1.54325288784913,0.999242311751784,1.16965804222704,1.50409737833809,1.91288332068843,1.54413993383661,2.08681052058379
|short_description=p2@Mthfd1l
}}

Revision as of 14:33, 4 August 2015

Short description:p2@Mthfd1l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mthfd1l_5end
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: 71bp_to_ENSMUST00000043735_5end
EntrezGene:270685
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Mthfd1l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E750.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F259.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F157.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D98.48
Mouse Schwann, donor2.CNhs12573.11746-123F912.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.73
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B214.15
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.28
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H33.56
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.89
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D36.33
thymus, neonate N10.CNhs11194.748-24E44.23
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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