FFCP PHASE1:Mm9::chr2:167673323..167673334,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=179 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:167673323..167673334,- | |||
|description=CAGE_peak_at_chr2:167673323..167673334,- | |description=CAGE_peak_at_chr2:167673323..167673334,- | ||
|id=chr2:167673323..167673334,- | |id=chr2:167673323..167673334,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.09e-09,1;CL:0000632,2.09e-09,1;CL:0000182,3.01e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.37e-20!22;UBERON:0007499!1.37e-20!22;UBERON:0006925!1.37e-20!22;UBERON:0009497!1.37e-20!22;UBERON:0000015!1.37e-20!22;UBERON:0002423!1.37e-20!22;UBERON:0006235!1.37e-20!22;UBERON:0008835!1.37e-20!22;UBERON:0003894!1.37e-20!22;UBERON:0004161!1.37e-20!22;UBERON:0008836!1.37e-20!22;UBERON:0009854!1.42e-19!23;UBERON:0009856!1.42e-19!23;UBERON:0002365!8.65e-18!25;UBERON:0002330!8.65e-18!25;UBERON:0005172!2.44e-16!49;UBERON:0005173!2.44e-16!49;UBERON:0002417!2.44e-16!49;UBERON:0000916!2.44e-16!49;UBERON:0009569!4.03e-11!66;UBERON:0003914!5.15e-11!47;UBERON:0005177!7.91e-09!85;UBERON:0005256!3.35e-08!47;UBERON:0005057!2.36e-07!51;UBERON:0002100!4.01e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!1.37e-20!22;UBERON:0007499!1.37e-20!22;UBERON:0006925!1.37e-20!22;UBERON:0009497!1.37e-20!22;UBERON:0000015!1.37e-20!22;UBERON:0002423!1.37e-20!22;UBERON:0006235!1.37e-20!22;UBERON:0008835!1.37e-20!22;UBERON:0003894!1.37e-20!22;UBERON:0004161!1.37e-20!22;UBERON:0008836!1.37e-20!22;UBERON:0009854!1.42e-19!23;UBERON:0009856!1.42e-19!23;UBERON:0002365!8.65e-18!25;UBERON:0002330!8.65e-18!25;UBERON:0005172!2.44e-16!49;UBERON:0005173!2.44e-16!49;UBERON:0002417!2.44e-16!49;UBERON:0000916!2.44e-16!49;UBERON:0009569!4.03e-11!66;UBERON:0003914!5.15e-11!47;UBERON:0005177!7.91e-09!85;UBERON:0005256!3.35e-08!47;UBERON:0005057!2.36e-07!51;UBERON:0002100!4.01e-07!98 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.55e-13,22;UBERON:0007499,7.55e-13,22;UBERON:0006925,7.55e-13,22;UBERON:0009497,7.55e-13,22;UBERON:0000015,7.55e-13,22;UBERON:0002423,7.55e-13,22;UBERON:0006235,7.55e-13,22;UBERON:0008835,7.55e-13,22;UBERON:0003894,7.55e-13,22;UBERON:0004161,7.55e-13,22;UBERON:0008836,7.55e-13,22;UBERON:0005172,1.14e-12,49;UBERON:0005173,1.14e-12,49;UBERON:0002417,1.14e-12,49;UBERON:0000916,1.14e-12,49;UBERON:0009854,2.77e-12,23;UBERON:0009856,2.77e-12,23;UBERON:0002365,2.74e-11,25;UBERON:0002330,2.74e-11,25;UBERON:0003104,4.76e-10,61;UBERON:0009142,4.76e-10,61;UBERON:0009569,3.10e-09,66;UBERON:0005177,1.35e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0,1.61910957491345,0,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.569128834118316,3.69025369949005,2.19798218977925,3.33172342588861,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,4.05648975048929,0.757736633841335,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0,1.61910957491345,0,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841767423545896,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0.569128834118316,3.69025369949005,2.19798218977925,3.33172342588861,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,1.11642284300551,4.05648975048929,0.757736633841335,0.896987067609561,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr2:167673323..167673334,- | |short_description=p@chr2:167673323..167673334,- | ||
}} | }} |
Latest revision as of 14:41, 4 August 2015
Short description: | p@chr2:167673323..167673334, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:167673323..167673334, - |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.09e-09 | 1 |
hepatic stellate cell | 2.09e-09 | 1 |
hepatocyte | 3.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 7.55e-13 | 22 |
epithelial sac | 7.55e-13 | 22 |
digestive gland | 7.55e-13 | 22 |
epithelium of foregut-midgut junction | 7.55e-13 | 22 |
anatomical boundary | 7.55e-13 | 22 |
hepatobiliary system | 7.55e-13 | 22 |
foregut-midgut junction | 7.55e-13 | 22 |
hepatic diverticulum | 7.55e-13 | 22 |
liver primordium | 7.55e-13 | 22 |
septum transversum | 7.55e-13 | 22 |
liver bud | 7.55e-13 | 22 |
abdomen element | 1.14e-12 | 49 |
abdominal segment element | 1.14e-12 | 49 |
abdominal segment of trunk | 1.14e-12 | 49 |
abdomen | 1.14e-12 | 49 |
digestive tract diverticulum | 2.77e-12 | 23 |
sac | 2.77e-12 | 23 |
exocrine gland | 2.74e-11 | 25 |
exocrine system | 2.74e-11 | 25 |
mesenchyme | 4.76e-10 | 61 |
entire embryonic mesenchyme | 4.76e-10 | 61 |
subdivision of trunk | 3.10e-09 | 66 |
trunk region element | 1.35e-07 | 79 |