FFCP PHASE1:Mm9::chr2:178190136..178190151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:178190136..178190151,+ | |||
|description=CAGE_peak_at_chr2:178190136..178190151,+ | |description=CAGE_peak_at_chr2:178190136..178190151,+ | ||
|id=chr2:178190136..178190151,+ | |id=chr2:178190136..178190151,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.10e-08!3;CL:0000359!1.10e-08!3;CL:0002539!1.10e-08!3;CL:0000514!1.10e-08!3 | |ontology_enrichment_celltype=CL:0000192!1.10e-08!3;CL:0000359!1.10e-08!3;CL:0002539!1.10e-08!3;CL:0000514!1.10e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.18e-44,3;CL:0000359,1.18e-44,3;CL:0002539,1.18e-44,3;CL:0000514,1.18e-44,3;CL:0000680,8.13e-23,6;CL:0000187,8.13e-23,6;CL:0000056,8.13e-23,6;CL:0000222,1.10e-19,7;CL:0000355,1.69e-15,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.10e-08!3;UBERON:0004237!1.10e-08!3;UBERON:0004695!1.10e-08!3;UBERON:0002111!1.10e-08!3;UBERON:0004178!1.10e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.18e-44,3;UBERON:0004237,1.18e-44,3;UBERON:0004695,1.18e-44,3;UBERON:0002111,1.18e-44,3;UBERON:0004178,1.18e-44,3;UBERON:0000947,9.53e-34,4;UBERON:0001637,9.53e-34,4;UBERON:0004573,9.53e-34,4;UBERON:0003509,9.53e-34,4;UBERON:0004571,9.53e-34,4;UBERON:0010191,9.53e-34,4;UBERON:0004572,9.53e-34,4;UBERON:0000055,3.42e-27,5;UBERON:0007500,3.42e-27,5;UBERON:0001981,3.42e-27,5;UBERON:0002049,3.42e-27,5;UBERON:0007798,3.42e-27,5;UBERON:0004537,3.42e-27,5;UBERON:0006965,3.42e-27,5;UBERON:0001134,1.69e-15,9;UBERON:0002036,1.69e-15,9;UBERON:0002385,1.69e-15,9;UBERON:0000486,1.69e-15,9;UBERON:0007503,1.69e-15,9;UBERON:0001015,1.69e-15,9;UBERON:0002329,1.69e-15,9;UBERON:0003082,1.69e-15,9;UBERON:0003059,1.69e-15,9;UBERON:0007282,1.69e-15,9;UBERON:0004290,1.69e-15,9;UBERON:0009618,1.69e-15,9;UBERON:0000383,4.97e-14,10;UBERON:0007524,7.94e-13,11;UBERON:0003077,7.94e-13,11;UBERON:0007285,7.94e-13,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56098362233926,7.40051597902456,6.79122982998222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56098362233926,7.40051597902456,6.79122982998222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340860645156116,0,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655739781506702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.269728692769641,0,0,0,0,0,0.448549638131936,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:178190136..178190151,+ | |short_description=p@chr2:178190136..178190151,+ | ||
}} | }} |
Latest revision as of 16:57, 4 August 2015
Short description: | p@chr2:178190136..178190151, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:178190136..178190151, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.18e-44 | 3 |
vascular associated smooth muscle cell | 1.18e-44 | 3 |
aortic smooth muscle cell | 1.18e-44 | 3 |
smooth muscle myoblast | 1.18e-44 | 3 |
muscle precursor cell | 8.13e-23 | 6 |
muscle cell | 8.13e-23 | 6 |
myoblast | 8.13e-23 | 6 |
mesodermal cell | 1.10e-19 | 7 |
multi-potent skeletal muscle stem cell | 1.69e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.18e-44 | 3 |
blood vessel smooth muscle | 1.18e-44 | 3 |
arterial system smooth muscle | 1.18e-44 | 3 |
artery smooth muscle tissue | 1.18e-44 | 3 |
aorta smooth muscle tissue | 1.18e-44 | 3 |
aorta | 9.53e-34 | 4 |
artery | 9.53e-34 | 4 |
systemic artery | 9.53e-34 | 4 |
arterial blood vessel | 9.53e-34 | 4 |
systemic arterial system | 9.53e-34 | 4 |
aortic system | 9.53e-34 | 4 |
arterial system | 9.53e-34 | 4 |
vessel | 3.42e-27 | 5 |
epithelial tube open at both ends | 3.42e-27 | 5 |
blood vessel | 3.42e-27 | 5 |
vasculature | 3.42e-27 | 5 |
vascular system | 3.42e-27 | 5 |
blood vasculature | 3.42e-27 | 5 |
vascular cord | 3.42e-27 | 5 |
skeletal muscle tissue | 1.69e-15 | 9 |
striated muscle tissue | 1.69e-15 | 9 |
muscle tissue | 1.69e-15 | 9 |
multilaminar epithelium | 1.69e-15 | 9 |
epithelial vesicle | 1.69e-15 | 9 |
musculature | 1.69e-15 | 9 |
somite | 1.69e-15 | 9 |
myotome | 1.69e-15 | 9 |
presomitic mesoderm | 1.69e-15 | 9 |
presumptive segmental plate | 1.69e-15 | 9 |
dermomyotome | 1.69e-15 | 9 |
trunk paraxial mesoderm | 1.69e-15 | 9 |
musculature of body | 4.97e-14 | 10 |
dense mesenchyme tissue | 7.94e-13 | 11 |
paraxial mesoderm | 7.94e-13 | 11 |
presumptive paraxial mesoderm | 7.94e-13 | 11 |