FFCP PHASE1:Mm9::chr4:128908952..128908957,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:128908952..128908957,+ | |||
|description=CAGE_peak_at_chr4:128908952..128908957,+ | |description=CAGE_peak_at_chr4:128908952..128908957,+ | ||
|id=chr4:128908952..128908957,+ | |id=chr4:128908952..128908957,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.38e-17!9;CL:0002251!7.38e-17!9;CL:0002076!2.61e-16!15;CL:0000066!3.22e-16!25;CL:0000223!1.47e-13!20;CL:0000239!4.53e-12!6;CL:0000677!4.53e-12!6;CL:0000212!4.53e-12!6;CL:0000584!4.53e-12!6;CL:0000075!3.51e-10!7 | |ontology_enrichment_celltype=CL:0002563!7.38e-17!9;CL:0002251!7.38e-17!9;CL:0002076!2.61e-16!15;CL:0000066!3.22e-16!25;CL:0000223!1.47e-13!20;CL:0000239!4.53e-12!6;CL:0000677!4.53e-12!6;CL:0000212!4.53e-12!6;CL:0000584!4.53e-12!6;CL:0000075!3.51e-10!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.65e-40,9;CL:0002251,1.65e-40,9;CL:0000066,1.57e-38,25;CL:0002076,6.31e-35,15;CL:0000223,1.00e-30,20;CL:0000239,2.89e-28,6;CL:0000677,2.89e-28,6;CL:0000584,2.89e-28,6;CL:0000075,3.60e-24,7;CL:0000682,1.96e-14,3;CL:0002250,9.11e-14,3;CL:0002321,2.13e-07,70;CL:0000764,8.98e-07,3;CL:0000765,8.98e-07,3;CL:0000038,8.98e-07,3;CL:0000547,8.98e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,8.98e-07,3;DOID:0060083,8.98e-07,3;DOID:1240,8.98e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.01e-22!15;UBERON:0001242!2.88e-19!13;UBERON:0000060!2.88e-19!13;UBERON:0001262!2.88e-19!13;UBERON:0004786!2.88e-19!13;UBERON:0003350!7.38e-17!9;UBERON:0004808!7.38e-17!9;UBERON:0001277!7.38e-17!9;UBERON:0000485!2.28e-13!11;UBERON:0004923!2.19e-12!24;UBERON:0000160!9.72e-12!43;UBERON:0005409!1.09e-10!59;UBERON:0001007!7.27e-09!128;UBERON:0001555!7.27e-09!128;UBERON:0007026!7.27e-09!128;UBERON:0004119!1.38e-08!130;UBERON:0000925!1.38e-08!130;UBERON:0006595!1.38e-08!130;UBERON:0004921!1.34e-07!126;UBERON:0004185!1.34e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.65e-40,9;UBERON:0004808,1.65e-40,9;UBERON:0001277,1.65e-40,9;UBERON:0000344,5.42e-35,15;UBERON:0001242,8.58e-34,13;UBERON:0001262,8.58e-34,13;UBERON:0004786,8.58e-34,13;UBERON:0000485,6.21e-33,11;UBERON:0004923,2.98e-21,24;UBERON:0000160,4.23e-16,31;UBERON:0005409,5.04e-10,47;UBERON:0003929,7.03e-07,55 | |||
|phase1_expression=0,13.9590163055744,10.4649825059593,19.9626379462508,18.5331420080148,10.7442734023609,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.45881856213434,10.9104073181854,6.03066794622705,8.40337807474967,0.380046838912748,0.504060259519861,1.10865255327652,5.71527606113668,2.46025915033828,0,6.35473563452804,1.66234645358492,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0.335769232728157,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,13.9590163055744,10.4649825059593,19.9626379462508,18.5331420080148,10.7442734023609,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.45881856213434,10.9104073181854,6.03066794622705,8.40337807474967,0.380046838912748,0.504060259519861,1.10865255327652,5.71527606113668,2.46025915033828,0,6.35473563452804,1.66234645358492,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,1.26679932737549,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.226730383615211,0,0,0.335769232728157,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:128908952..128908957,+ | |short_description=p@chr4:128908952..128908957,+ | ||
}} | }} |
Latest revision as of 19:18, 4 August 2015
Short description: | p@chr4:128908952..128908957, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:128908952..128908957, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.65e-40 | 9 |
epithelial cell of alimentary canal | 1.65e-40 | 9 |
epithelial cell | 1.57e-38 | 25 |
endo-epithelial cell | 6.31e-35 | 15 |
endodermal cell | 1.00e-30 | 20 |
brush border epithelial cell | 2.89e-28 | 6 |
gut absorptive cell | 2.89e-28 | 6 |
enterocyte | 2.89e-28 | 6 |
columnar/cuboidal epithelial cell | 3.60e-24 | 7 |
M cell of gut | 1.96e-14 | 3 |
intestinal crypt stem cell | 9.11e-14 | 3 |
embryonic cell | 2.13e-07 | 70 |
erythroid lineage cell | 8.98e-07 | 3 |
erythroblast | 8.98e-07 | 3 |
erythroid progenitor cell | 8.98e-07 | 3 |
proerythroblast | 8.98e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.65e-40 | 9 |
gastrointestinal system epithelium | 1.65e-40 | 9 |
intestinal epithelium | 1.65e-40 | 9 |
mucosa | 5.42e-35 | 15 |
intestinal mucosa | 8.58e-34 | 13 |
wall of intestine | 8.58e-34 | 13 |
gastrointestinal system mucosa | 8.58e-34 | 13 |
simple columnar epithelium | 6.21e-33 | 11 |
organ component layer | 2.98e-21 | 24 |
intestine | 4.23e-16 | 31 |
gastrointestinal system | 5.04e-10 | 47 |
gut epithelium | 7.03e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.98e-07 | 3 |
immune system cancer | 8.98e-07 | 3 |
leukemia | 8.98e-07 | 3 |