FFCP PHASE1:Mm9::chr12:15822402..15822419,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=53|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:15822402..15822419,-|id=chr12:15822402..15822419,-|ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23|ontology_enrichment_celltype_v019_2=CL:0002611,2.13e-10,2;CL:0000624,5.12e-10,8;CL:0000791,6.35e-09,9;CL:0000789,6.35e-09,9;CL:0002420,6.35e-09,9;CL:0002419,6.35e-09,9;CL:0000790,6.35e-09,9;CL:0000120,1.78e-07,3;CL:0000084,2.51e-07,11;CL:0000827,2.51e-07,11;CL:0000838,9.98e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.55e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0004121!6.69e-08!102;UBERON:0000924!6.69e-08!102;UBERON:0006601!6.69e-08!102;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0003056!3.91e-07!49;UBERON:0000073!4.86e-07!75;UBERON:0001016!4.86e-07!75;UBERON:0000477!9.08e-07!154;UBERON:0000033!9.97e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.17e-12,36;UBERON:0002256,2.13e-10,2;UBERON:0000153,2.30e-10,43;UBERON:0000970,1.19e-09,9;UBERON:0000019,1.19e-09,9;UBERON:0000047,1.19e-09,9;UBERON:0010312,1.19e-09,9;UBERON:0004088,1.19e-09,9;UBERON:0002104,1.19e-09,9;UBERON:0001456,1.19e-09,9;UBERON:0003072,1.19e-09,9;UBERON:0004128,1.19e-09,9;UBERON:0003071,1.19e-09,9;UBERON:0001444,6.46e-08,11;UBERON:0002370,2.90e-07,23;UBERON:0000974,2.90e-07,23;UBERON:0004807,2.90e-07,23;UBERON:0005058,2.90e-07,23;UBERON:0003351,2.90e-07,23;UBERON:0009113,2.90e-07,23;UBERON:0003295,2.90e-07,23;UBERON:0009722,2.90e-07,23;UBERON:0005562,2.90e-07,23;UBERON:0007690,2.90e-07,23;UBERON:0000020,2.91e-07,12;UBERON:0001032,2.91e-07,12;UBERON:0004456,2.91e-07,12;UBERON:0006562,6.09e-07,24;UBERON:0003408,6.09e-07,24;UBERON:0001557,6.09e-07,24;UBERON:0001042,6.09e-07,24;UBERON:0008814,6.09e-07,24;UBERON:0009145,6.09e-07,24|phase1_expression=0.640595388419176,0,0,0,0,0,0,1.03298658753261,0.422366166455,0,0.34243593645101,0.0797721589953364,1.19840510951844,1.31130603628496,0.333109761815663,0,0,0.157731082679119,0.548457734422955,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,1.45072428402269,0.672187598284928,0,0.286533439938757,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.135005938331691,0.630974884054146,1.14260393761521,1.10434270475807,0.61245399607477,0.575072826109418,0,0,0.255374676170375,0.307213066512487,1.31886287730194,0.823388792421687,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0,0.376963056338593,0.521472960576829,0.255715457330331,0.62336413367868,0.486723789203273,0.81471491080253,0.124406970610093,0,0.631325567659422,0.390361328888111,0.919608417733892,0.360124259610698,0.30140963567143,1.76894897793452,4.48398020996974,4.59138450342671,2.06962696591213,0.431135985865684,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0,0.925602677324269,0.465067889500816,0.536546802799238,0.583826711835847,0.493679549740441,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.420814919341911,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.585400943573396,0,0.44292937929755,0.318909537314974,0.491589944147214,0,0.289298117163023,0,0,0,0,0.160550589987792,0.468846746368813,0.327869890753351,0,0.315508219416257,0,0,0.477937595905104,0,0,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.13020438484395,0.419437377702843,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,1.19208812868759,0.480781798079875,1.18151621739662,0.403865799792591,0.381034033274999,0.806609481094724,0.877120926657772,0.673482891482306,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.512200817262403,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p@chr12:15822402..15822419,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:15822402..15822419,- | |||
|description=CAGE_peak_at_chr12:15822402..15822419,- | |||
|id=chr12:15822402..15822419,- | |||
|ontology_enrichment_celltype=CL:0000117!1.98e-07!23;CL:0000337!1.98e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,2.13e-10,2;CL:0000624,5.12e-10,8;CL:0000791,6.35e-09,9;CL:0000789,6.35e-09,9;CL:0002420,6.35e-09,9;CL:0002419,6.35e-09,9;CL:0000790,6.35e-09,9;CL:0000120,1.78e-07,3;CL:0000084,2.51e-07,11;CL:0000827,2.51e-07,11;CL:0000838,9.98e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.55e-11!86;UBERON:0000153!6.79e-11!94;UBERON:0002346!1.14e-08!71;UBERON:0003075!1.14e-08!71;UBERON:0007284!1.14e-08!71;UBERON:0004121!6.69e-08!102;UBERON:0000924!6.69e-08!102;UBERON:0006601!6.69e-08!102;UBERON:0001017!2.22e-07!73;UBERON:0005743!2.22e-07!73;UBERON:0003056!3.91e-07!49;UBERON:0000073!4.86e-07!75;UBERON:0001016!4.86e-07!75;UBERON:0000477!9.08e-07!154;UBERON:0000033!9.97e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.17e-12,36;UBERON:0002256,2.13e-10,2;UBERON:0000153,2.30e-10,43;UBERON:0000970,1.19e-09,9;UBERON:0000019,1.19e-09,9;UBERON:0000047,1.19e-09,9;UBERON:0010312,1.19e-09,9;UBERON:0004088,1.19e-09,9;UBERON:0002104,1.19e-09,9;UBERON:0001456,1.19e-09,9;UBERON:0003072,1.19e-09,9;UBERON:0004128,1.19e-09,9;UBERON:0003071,1.19e-09,9;UBERON:0001444,6.46e-08,11;UBERON:0002370,2.90e-07,23;UBERON:0000974,2.90e-07,23;UBERON:0004807,2.90e-07,23;UBERON:0005058,2.90e-07,23;UBERON:0003351,2.90e-07,23;UBERON:0009113,2.90e-07,23;UBERON:0003295,2.90e-07,23;UBERON:0009722,2.90e-07,23;UBERON:0005562,2.90e-07,23;UBERON:0007690,2.90e-07,23;UBERON:0000020,2.91e-07,12;UBERON:0001032,2.91e-07,12;UBERON:0004456,2.91e-07,12;UBERON:0006562,6.09e-07,24;UBERON:0003408,6.09e-07,24;UBERON:0001557,6.09e-07,24;UBERON:0001042,6.09e-07,24;UBERON:0008814,6.09e-07,24;UBERON:0009145,6.09e-07,24 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,1.03298658753261,0.422366166455,0,0.34243593645101,0.0797721589953364,1.19840510951844,1.31130603628496,0.333109761815663,0,0,0.157731082679119,0.548457734422955,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,1.45072428402269,0.672187598284928,0,0.286533439938757,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.518448061542388,0.135005938331691,0.630974884054146,1.14260393761521,1.10434270475807,0.61245399607477,0.575072826109418,0,0,0.255374676170375,0.307213066512487,1.31886287730194,0.823388792421687,0.52091337055676,0,0,0.45839474333043,0.883885756421003,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0,0.376963056338593,0.521472960576829,0.255715457330331,0.62336413367868,0.486723789203273,0.81471491080253,0.124406970610093,0,0.631325567659422,0.390361328888111,0.919608417733892,0.360124259610698,0.30140963567143,1.76894897793452,4.48398020996974,4.59138450342671,2.06962696591213,0.431135985865684,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0,0.925602677324269,0.465067889500816,0.536546802799238,0.583826711835847,0.493679549740441,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0.581857461502877,0.420814919341911,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0.585400943573396,0,0.44292937929755,0.318909537314974,0.491589944147214,0,0.289298117163023,0,0,0,0,0.160550589987792,0.468846746368813,0.327869890753351,0,0.315508219416257,0,0,0.477937595905104,0,0,0,0.584511715822624,0.395287777946524,0,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.410082683163076,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.13020438484395,0.419437377702843,0,0,1.58005560314089,0.202725215290164,0.308132871494482,0.25984164595559,0.179026695667481,1.19208812868759,0.480781798079875,1.18151621739662,0.403865799792591,0.381034033274999,0.806609481094724,0.877120926657772,0.673482891482306,1.05189211963412,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.512200817262403,0,0.419226325255965,0.183843508450014,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.128050304809739,0,0,0,0.38581844092741,0,0.147198920134397,0.685738504770831,0,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr12:15822402..15822419,- | |||
}} |
Latest revision as of 21:11, 4 August 2015
Short description: | p@chr12:15822402..15822419, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:15822402..15822419, - |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 2.13e-10 | 2 |
CD4-positive, alpha-beta T cell | 5.12e-10 | 8 |
mature alpha-beta T cell | 6.35e-09 | 9 |
alpha-beta T cell | 6.35e-09 | 9 |
immature T cell | 6.35e-09 | 9 |
mature T cell | 6.35e-09 | 9 |
immature alpha-beta T cell | 6.35e-09 | 9 |
granule cell | 1.78e-07 | 3 |
T cell | 2.51e-07 | 11 |
pro-T cell | 2.51e-07 | 11 |
lymphoid lineage restricted progenitor cell | 9.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 1.17e-12 | 36 |
dorsal horn of spinal cord | 2.13e-10 | 2 |
anterior region of body | 2.30e-10 | 43 |
eye | 1.19e-09 | 9 |
camera-type eye | 1.19e-09 | 9 |
simple eye | 1.19e-09 | 9 |
immature eye | 1.19e-09 | 9 |
ocular region | 1.19e-09 | 9 |
visual system | 1.19e-09 | 9 |
face | 1.19e-09 | 9 |
optic cup | 1.19e-09 | 9 |
optic vesicle | 1.19e-09 | 9 |
eye primordium | 1.19e-09 | 9 |
subdivision of head | 6.46e-08 | 11 |
thymus | 2.90e-07 | 23 |
neck | 2.90e-07 | 23 |
respiratory system epithelium | 2.90e-07 | 23 |
hemolymphoid system gland | 2.90e-07 | 23 |
pharyngeal epithelium | 2.90e-07 | 23 |
thymic region | 2.90e-07 | 23 |
pharyngeal gland | 2.90e-07 | 23 |
entire pharyngeal arch endoderm | 2.90e-07 | 23 |
thymus primordium | 2.90e-07 | 23 |
early pharyngeal endoderm | 2.90e-07 | 23 |
sense organ | 2.91e-07 | 12 |
sensory system | 2.91e-07 | 12 |
entire sense organ system | 2.91e-07 | 12 |
pharynx | 6.09e-07 | 24 |
gland of gut | 6.09e-07 | 24 |
upper respiratory tract | 6.09e-07 | 24 |
chordate pharynx | 6.09e-07 | 24 |
pharyngeal arch system | 6.09e-07 | 24 |
pharyngeal region of foregut | 6.09e-07 | 24 |