FFCP PHASE1:Mm9::chr2:48669536..48669560,+: Difference between revisions
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{{FFCP|EntrezGene=11480|HGNC=|MCL_coexpression_id=52|UniProt=P27038,A2AI38,Q8BRV4|association_with_transcript=-68bp_to_ENSMUST00000063886,NM_007396,uc008jpn.2,uc008jpo.2_5end|description=CAGE_peak_3_at_Acvr2a_5end|id=chr2:48669536..48669560,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!9.97e-10!34;UBERON:0002791!2.47e-08!29;UBERON:0003528!2.47e-08!29;UBERON:0001893!2.47e-08!29;UBERON:0002780!8.45e-08!39;UBERON:0001890!8.45e-08!39;UBERON:0006240!8.45e-08!39;UBERON:0003080!1.01e-07!40;UBERON:0003056!3.88e-07!49;UBERON:0000956!6.77e-07!21;UBERON:0001869!6.77e-07!21;UBERON:0000203!6.77e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-10,34;UBERON:0003528,4.89e-09,29;UBERON:0002791,4.89e-09,29;UBERON:0001893,4.89e-09,29;UBERON:0002780,1.03e-07,39;UBERON:0001890,1.03e-07,39;UBERON:0006240,1.03e-07,39;UBERON:0003080,1.22e-07,40;UBERON:0000956,1.56e-07,21;UBERON:0001869,1.56e-07,21;UBERON:0000203,1.56e-07,21;UBERON:0003056,4.21e-07,49;UBERON:0002021,4.38e-07,10;UBERON:0000411,4.38e-07,10;UBERON:0001950,4.38e-07,10;UBERON:0010371,4.85e-07,73|phase1_expression=1.12104192973356,2.44282785347553,1.81999695755814,4.83942738090928,8.5152274090879,0.503637815735669,0.700837921786577,0.645616617207881,0.703943610758334,1.87251621057595,0.68487187290202,0.398860794976682,0.171200729931206,0.874204024189974,0.666219523631325,0.404950534779652,0,0,0.274228867211478,0,3.31668831589172,0,0,0.639969691173627,0.22940928106717,1.14846392823004,3.87685796543167,1.07735616342945,2.28028103347649,2.26827116783938,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.405507724878058,0,0.782391344348039,1.09012578190223,0.659058548203415,1.1665793944457,0.279972843250725,1.43752564364972,0,1.45072428402269,2.01656279485478,0,0.286533439938757,0,3.84401275633236,1.5869729378161,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,3.62913643079672,1.62007125998029,1.89292465216244,1.71390590642282,1.76694832761291,5.02212276781312,1.91690942036473,0,1.10115880999389,1.65993539510744,1.68967186581868,4.3522474950964,1.9212405156506,3.12548022334056,1.11673199600552,0.56276261003168,3.20876320331301,2.65165726926301,3.55929201997757,6.52398060388552,1.66597625333005,1.36028808192214,1.15945795480671,4.30211938490693,1.3599426674155,0.539703191637817,1.29955283489534,2.68816132258401,1.68533304158102,0.340860645156116,0,0.35333957451034,2.11265129665021,7.69958864485907,17.8363667794652,85.3280043783997,0.216491041011214,0.760079596425296,0,2.05530983494308,1.03575153458869,0.593768556259299,1.21439728736295,1.52232739156071,0.691846491768175,0.301445281105245,0.940709657085638,0.753999547978053,1.23597483867187,1.15679485535929,0,1.13236794963186,0.883366073841574,0,1.86391761218122,0.585561594023094,0.628340120440365,1.78819938646014,0.359445373517761,0,0,1.3481157546434,3.20250421973039,5.15182843662744,2.9550134432687,4.60287823194595,1.0389402227978,3.24482526135515,1.32391173005411,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,1.37941262660084,1.80062129805349,2.56198190320716,1.02054748726992,1.0249097622788,1.12442069471675,1.55222022443409,3.44908788692548,3.21480336285293,3.87092473160687,3.28793598641362,2.78047249225598,4.52727816478817,1.64625709126355,1.99034266818493,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.710234206755631,0.983821158737019,0.925602677324269,0.697601834251224,1.07309360559848,1.05088808130453,0.987359099480883,0.985004784474571,1.86458261955468,1.16959989940266,1.75640092232841,1.34206418760372,4.20579897128254,6.5858951922742,1.65209391491899,1.32225283331772,4.47905326123991,2.55460339046482,1.03093969057675,1.61346819698674,0.444756087689741,1.90225626112559,0.474529061544512,1.15289268306808,1.00534083520108,0.596869416123452,1.75467678407208,2.69645822596266,0.648414149624083,2.19055400579804,0,1.14248512609729,1.1270773567308,1.22190796707189,0.775809948670503,1.82353131714828,1.45444035385792,1.62371162777562,1.8839847340965,1.35736880313981,2.66807364378434,0.667380422864376,0.786235980452812,0.674586337154561,0.202860121388503,0.964708639009667,0.763877555344259,0.863088412352432,0.810676133875177,1.09824565275233,0,2.97712758134803,2.49630138491648,2.02063102357689,1.07638448113147,2.8946611281802,2.40179147216586,2.08440552947533,1.14075483509418,0.848725428875941,2.34690248288502,3.51763140627813,2.14239276797412,2.92700471786698,2.04925687338048,2.87904096543407,3.50800491046472,2.62181303545181,4.14443956478149,2.4590339958857,0,0,1.47529281905711,1.10374698521893,0.80275294993896,0.703270119553219,0,2.27223834483936,0.94652465824877,2.34263246577983,0.861693590931196,0.955875191810208,0.445597348164788,0.849229592366497,0.404810701674894,2.04579100537918,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11480 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P27038,uniprot:A2AI38,uniprot:Q8BRV4 | |||
|association_with_transcript=-68bp_to_ENSMUST00000063886,NM_007396,uc008jpn.2,uc008jpo.2_5end | |||
|cluster_id=chr2:48669536..48669560,+ | |||
|description=CAGE_peak_3_at_Acvr2a_5end | |||
|id=chr2:48669536..48669560,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.97e-10!34;UBERON:0002791!2.47e-08!29;UBERON:0003528!2.47e-08!29;UBERON:0001893!2.47e-08!29;UBERON:0002780!8.45e-08!39;UBERON:0001890!8.45e-08!39;UBERON:0006240!8.45e-08!39;UBERON:0003080!1.01e-07!40;UBERON:0003056!3.88e-07!49;UBERON:0000956!6.77e-07!21;UBERON:0001869!6.77e-07!21;UBERON:0000203!6.77e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.51e-10,34;UBERON:0003528,4.89e-09,29;UBERON:0002791,4.89e-09,29;UBERON:0001893,4.89e-09,29;UBERON:0002780,1.03e-07,39;UBERON:0001890,1.03e-07,39;UBERON:0006240,1.03e-07,39;UBERON:0003080,1.22e-07,40;UBERON:0000956,1.56e-07,21;UBERON:0001869,1.56e-07,21;UBERON:0000203,1.56e-07,21;UBERON:0003056,4.21e-07,49;UBERON:0002021,4.38e-07,10;UBERON:0000411,4.38e-07,10;UBERON:0001950,4.38e-07,10;UBERON:0010371,4.85e-07,73 | |||
|phase1_expression=1.12104192973356,2.44282785347553,1.81999695755814,4.83942738090928,8.5152274090879,0.503637815735669,0.700837921786577,0.645616617207881,0.703943610758334,1.87251621057595,0.68487187290202,0.398860794976682,0.171200729931206,0.874204024189974,0.666219523631325,0.404950534779652,0,0,0.274228867211478,0,3.31668831589172,0,0,0.639969691173627,0.22940928106717,1.14846392823004,3.87685796543167,1.07735616342945,2.28028103347649,2.26827116783938,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0.408338712524738,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.405507724878058,0,0.782391344348039,1.09012578190223,0.659058548203415,1.1665793944457,0.279972843250725,1.43752564364972,0,1.45072428402269,2.01656279485478,0,0.286533439938757,0,3.84401275633236,1.5869729378161,3.1691570175309,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,3.62913643079672,1.62007125998029,1.89292465216244,1.71390590642282,1.76694832761291,5.02212276781312,1.91690942036473,0,1.10115880999389,1.65993539510744,1.68967186581868,4.3522474950964,1.9212405156506,3.12548022334056,1.11673199600552,0.56276261003168,3.20876320331301,2.65165726926301,3.55929201997757,6.52398060388552,1.66597625333005,1.36028808192214,1.15945795480671,4.30211938490693,1.3599426674155,0.539703191637817,1.29955283489534,2.68816132258401,1.68533304158102,0.340860645156116,0,0.35333957451034,2.11265129665021,7.69958864485907,17.8363667794652,85.3280043783997,0.216491041011214,0.760079596425296,0,2.05530983494308,1.03575153458869,0.593768556259299,1.21439728736295,1.52232739156071,0.691846491768175,0.301445281105245,0.940709657085638,0.753999547978053,1.23597483867187,1.15679485535929,0,1.13236794963186,0.883366073841574,0,1.86391761218122,0.585561594023094,0.628340120440365,1.78819938646014,0.359445373517761,0,0,1.3481157546434,3.20250421973039,5.15182843662744,2.9550134432687,4.60287823194595,1.0389402227978,3.24482526135515,1.32391173005411,0.622034853050465,0.505445516867349,0.420883711772948,1.95180664444056,1.37941262660084,1.80062129805349,2.56198190320716,1.02054748726992,1.0249097622788,1.12442069471675,1.55222022443409,3.44908788692548,3.21480336285293,3.87092473160687,3.28793598641362,2.78047249225598,4.52727816478817,1.64625709126355,1.99034266818493,0,0,0,1.24275463521301,0.703578179943289,0.180062061461015,0.710234206755631,0.983821158737019,0.925602677324269,0.697601834251224,1.07309360559848,1.05088808130453,0.987359099480883,0.985004784474571,1.86458261955468,1.16959989940266,1.75640092232841,1.34206418760372,4.20579897128254,6.5858951922742,1.65209391491899,1.32225283331772,4.47905326123991,2.55460339046482,1.03093969057675,1.61346819698674,0.444756087689741,1.90225626112559,0.474529061544512,1.15289268306808,1.00534083520108,0.596869416123452,1.75467678407208,2.69645822596266,0.648414149624083,2.19055400579804,0,1.14248512609729,1.1270773567308,1.22190796707189,0.775809948670503,1.82353131714828,1.45444035385792,1.62371162777562,1.8839847340965,1.35736880313981,2.66807364378434,0.667380422864376,0.786235980452812,0.674586337154561,0.202860121388503,0.964708639009667,0.763877555344259,0.863088412352432,0.810676133875177,1.09824565275233,0,2.97712758134803,2.49630138491648,2.02063102357689,1.07638448113147,2.8946611281802,2.40179147216586,2.08440552947533,1.14075483509418,0.848725428875941,2.34690248288502,3.51763140627813,2.14239276797412,2.92700471786698,2.04925687338048,2.87904096543407,3.50800491046472,2.62181303545181,4.14443956478149,2.4590339958857,0,0,1.47529281905711,1.10374698521893,0.80275294993896,0.703270119553219,0,2.27223834483936,0.94652465824877,2.34263246577983,0.861693590931196,0.955875191810208,0.445597348164788,0.849229592366497,0.404810701674894,2.04579100537918,1.18586333383957,0.963963949265421,1.13552068166615,0.890328018336276,1.79175655288934,1.64970122972535,1.32745138339963,0.971122544619926,1.209294227859,1.50884063804718,0.590603785761546,1.84461088766356,2.32585463851399,0.727067458955011,1.42598951353889,0.948110273807448,2.10837217149998,2.06271086496374,2.04263763452273,2.34079422240703,0.905510786479282,0.857348140126369,1.95074257006501,0.535106452806212,3.45552943264454,0.913394847343798,0.938686832254841,0.63549621259146,0.441056796109924,3.62749756471256,1.93757312035087,3.1362720962641,3.34242563208782,3.77524069413641,3.20628920292836,0.370850604021019,0.341741761595705,1.03193433981611,0.555583582109135,0.376736914009382,0.27338845544205,0.457556346413045,0.339956859987711,0.419854356970974,0.276399947608848,1.90934123603023,2.21435195506795,0.813277868507395,1.62008011232702,0.209088296014469,1.9652630737156,1.88810084938749,1.40510874733071,0.785267825952089,1.03691978633434,1.24267862617385,12.9649375897364,0.448549638131936,0.496375471371293,0.972255941720238,1.03327858782185,0.337912250981556,0.821500670520278,0.781226309063701,0.838874755405687,2.89900944991207,5.47257011889944,0.316011120628178,0.810900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| |||
|short_description=p3@Acvr2a | |||
}} |
Revision as of 05:17, 5 August 2015
Short description: | p3@Acvr2a |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acvr2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -68bp_to_ENSMUST00000063886, NM_007396, uc008jpn.2, uc008jpo.2_5end |
EntrezGene: | 11480 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 1.51e-10 | 34 |
brain grey matter | 4.89e-09 | 29 |
regional part of telencephalon | 4.89e-09 | 29 |
telencephalon | 4.89e-09 | 29 |
regional part of forebrain | 1.03e-07 | 39 |
forebrain | 1.03e-07 | 39 |
future forebrain | 1.03e-07 | 39 |
anterior neural tube | 1.22e-07 | 40 |
cerebral cortex | 1.56e-07 | 21 |
cerebral hemisphere | 1.56e-07 | 21 |
pallium | 1.56e-07 | 21 |
pre-chordal neural plate | 4.21e-07 | 49 |
occipital lobe | 4.38e-07 | 10 |
visual cortex | 4.38e-07 | 10 |
neocortex | 4.38e-07 | 10 |
ecto-epithelium | 4.85e-07 | 73 |