FFCP PHASE1:Mm9::chr12:76700319..76700320,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=162|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:76700319..76700320,-|id=chr12:76700319..76700320,-|ontology_enrichment_celltype=CL:0000181!1.11e-55!5;CL:0000417!1.11e-55!5;CL:0000668!1.11e-55!5;CL:0000412!1.11e-55!5;CL:0000182!1.11e-55!5;CL:0000414!7.89e-26!11;CL:0000057!7.74e-19!1;CL:0000632!7.74e-19!1;CL:0000223!1.45e-14!20;CL:0000066!8.53e-12!25;CL:0002320!4.29e-10!46;CL:0000134!4.29e-10!46;CL:0000219!1.10e-08!54;CL:0000063!3.36e-07!66;CL:0000151!3.64e-07!3;CL:0000499!3.64e-07!3;CL:0000327!3.64e-07!3|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-55,5;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000223,1.45e-14,20;CL:0000066,8.53e-12,25;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.26e-20!22;UBERON:0007499!2.26e-20!22;UBERON:0006925!2.26e-20!22;UBERON:0009497!2.26e-20!22;UBERON:0000015!2.26e-20!22;UBERON:0002423!2.26e-20!22;UBERON:0006235!2.26e-20!22;UBERON:0008835!2.26e-20!22;UBERON:0003894!2.26e-20!22;UBERON:0004161!2.26e-20!22;UBERON:0008836!2.26e-20!22;UBERON:0009854!1.61e-19!23;UBERON:0009856!1.61e-19!23;UBERON:0002365!5.10e-18!25;UBERON:0002330!5.10e-18!25;UBERON:0002384!4.29e-10!46;UBERON:0003914!6.83e-10!47;UBERON:0005256!6.83e-10!47;UBERON:0005172!1.64e-09!49;UBERON:0005173!1.64e-09!49;UBERON:0002417!1.64e-09!49;UBERON:0000916!1.64e-09!49;UBERON:0005057!3.67e-09!51;UBERON:0003929!1.55e-08!55;UBERON:0002368!7.20e-08!60;UBERON:0002530!2.65e-07!65;UBERON:0000490!3.36e-07!66;UBERON:0009569!3.36e-07!66;UBERON:0005911!6.58e-07!69;UBERON:0002405!8.13e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-20,22;UBERON:0007499,2.26e-20,22;UBERON:0006925,2.26e-20,22;UBERON:0009497,2.26e-20,22;UBERON:0000015,2.26e-20,22;UBERON:0002423,2.26e-20,22;UBERON:0006235,2.26e-20,22;UBERON:0008835,2.26e-20,22;UBERON:0003894,2.26e-20,22;UBERON:0004161,2.26e-20,22;UBERON:0008836,2.26e-20,22;UBERON:0009854,1.61e-19,23;UBERON:0009856,1.61e-19,23;UBERON:0002365,5.10e-18,25;UBERON:0002330,5.10e-18,25;UBERON:0005256,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0009569,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,3.39985666853875,2.15881276655127,2.59910566979068,5.37632264516803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:76700319..76700320,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=162 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:76700319..76700320,- | |||
|description=CAGE_peak_at_chr12:76700319..76700320,- | |||
|id=chr12:76700319..76700320,- | |||
|ontology_enrichment_celltype=CL:0000181!1.11e-55!5;CL:0000417!1.11e-55!5;CL:0000668!1.11e-55!5;CL:0000412!1.11e-55!5;CL:0000182!1.11e-55!5;CL:0000414!7.89e-26!11;CL:0000057!7.74e-19!1;CL:0000632!7.74e-19!1;CL:0000223!1.45e-14!20;CL:0000066!8.53e-12!25;CL:0002320!4.29e-10!46;CL:0000134!4.29e-10!46;CL:0000219!1.10e-08!54;CL:0000063!3.36e-07!66;CL:0000151!3.64e-07!3;CL:0000499!3.64e-07!3;CL:0000327!3.64e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.11e-55,5;CL:0000057,7.74e-19,1;CL:0000632,7.74e-19,1;CL:0000223,1.45e-14,20;CL:0000066,8.53e-12,25;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54;CL:0000151,3.64e-07,3;CL:0000499,3.64e-07,3;CL:0000327,3.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.26e-20!22;UBERON:0007499!2.26e-20!22;UBERON:0006925!2.26e-20!22;UBERON:0009497!2.26e-20!22;UBERON:0000015!2.26e-20!22;UBERON:0002423!2.26e-20!22;UBERON:0006235!2.26e-20!22;UBERON:0008835!2.26e-20!22;UBERON:0003894!2.26e-20!22;UBERON:0004161!2.26e-20!22;UBERON:0008836!2.26e-20!22;UBERON:0009854!1.61e-19!23;UBERON:0009856!1.61e-19!23;UBERON:0002365!5.10e-18!25;UBERON:0002330!5.10e-18!25;UBERON:0002384!4.29e-10!46;UBERON:0003914!6.83e-10!47;UBERON:0005256!6.83e-10!47;UBERON:0005172!1.64e-09!49;UBERON:0005173!1.64e-09!49;UBERON:0002417!1.64e-09!49;UBERON:0000916!1.64e-09!49;UBERON:0005057!3.67e-09!51;UBERON:0003929!1.55e-08!55;UBERON:0002368!7.20e-08!60;UBERON:0002530!2.65e-07!65;UBERON:0000490!3.36e-07!66;UBERON:0009569!3.36e-07!66;UBERON:0005911!6.58e-07!69;UBERON:0002405!8.13e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-20,22;UBERON:0007499,2.26e-20,22;UBERON:0006925,2.26e-20,22;UBERON:0009497,2.26e-20,22;UBERON:0000015,2.26e-20,22;UBERON:0002423,2.26e-20,22;UBERON:0006235,2.26e-20,22;UBERON:0008835,2.26e-20,22;UBERON:0003894,2.26e-20,22;UBERON:0004161,2.26e-20,22;UBERON:0008836,2.26e-20,22;UBERON:0009854,1.61e-19,23;UBERON:0009856,1.61e-19,23;UBERON:0002365,5.10e-18,25;UBERON:0002330,5.10e-18,25;UBERON:0005256,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0009569,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44169550792555,3.39985666853875,2.15881276655127,2.59910566979068,5.37632264516803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:76700319..76700320,- | |||
}} |
Latest revision as of 05:57, 5 August 2015
Short description: | p@chr12:76700319..76700320, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:76700319..76700320, - |
Coexpression cluster: | MCL_coexpression_mm9:162 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.11e-55 | 5 |
fibroblast | 7.74e-19 | 1 |
hepatic stellate cell | 7.74e-19 | 1 |
endodermal cell | 1.45e-14 | 20 |
epithelial cell | 8.53e-12 | 25 |
connective tissue cell | 4.29e-10 | 46 |
mesenchymal cell | 4.29e-10 | 46 |
motile cell | 1.10e-08 | 54 |
secretory cell | 3.64e-07 | 3 |
stromal cell | 3.64e-07 | 3 |
extracellular matrix secreting cell | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.26e-20 | 22 |
epithelial sac | 2.26e-20 | 22 |
digestive gland | 2.26e-20 | 22 |
epithelium of foregut-midgut junction | 2.26e-20 | 22 |
anatomical boundary | 2.26e-20 | 22 |
hepatobiliary system | 2.26e-20 | 22 |
foregut-midgut junction | 2.26e-20 | 22 |
hepatic diverticulum | 2.26e-20 | 22 |
liver primordium | 2.26e-20 | 22 |
septum transversum | 2.26e-20 | 22 |
liver bud | 2.26e-20 | 22 |
digestive tract diverticulum | 1.61e-19 | 23 |
sac | 1.61e-19 | 23 |
exocrine gland | 5.10e-18 | 25 |
exocrine system | 5.10e-18 | 25 |
trunk mesenchyme | 2.64e-10 | 45 |
connective tissue | 4.29e-10 | 46 |
epithelial tube | 6.83e-10 | 47 |
abdomen element | 1.64e-09 | 49 |
abdominal segment element | 1.64e-09 | 49 |
abdominal segment of trunk | 1.64e-09 | 49 |
abdomen | 1.64e-09 | 49 |
gut epithelium | 1.55e-08 | 55 |
endocrine gland | 7.20e-08 | 60 |
mesenchyme | 9.51e-08 | 61 |
entire embryonic mesenchyme | 9.51e-08 | 61 |
gland | 2.65e-07 | 65 |
unilaminar epithelium | 3.36e-07 | 66 |
subdivision of trunk | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |