FFCP PHASE1:Mm9::chr4:155610108..155610159,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:155610108..155610159,+
|short_description=p@chr4:155610108..155610159,+
|description=CAGE_peak_at_chr4:155610108..155610159,+
|association_with_transcript=...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:155610108..155610159,+ | |||
|description=CAGE_peak_at_chr4:155610108..155610159,+ | |||
|id=chr4:155610108..155610159,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.92e-15!32;CL:0002032!3.92e-15!32;CL:0000037!3.92e-15!32;CL:0000566!3.92e-15!32;CL:0000837!3.92e-15!32;CL:0002031!1.67e-12!25;CL:0002320!3.86e-10!46;CL:0000134!3.86e-10!46;CL:0000542!8.56e-09!13;CL:0000051!8.56e-09!13;CL:0000738!2.69e-08!17;CL:0002087!2.69e-08!17;CL:0000838!2.88e-08!12;CL:0000049!9.86e-08!19;CL:0000084!1.12e-07!11;CL:0000827!1.12e-07!11;CL:0000763!7.62e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.92e-15,32;CL:0002032,3.92e-15,32;CL:0000037,3.92e-15,32;CL:0000837,3.92e-15,32;CL:0002031,1.67e-12,25;CL:0002320,3.86e-10,46;CL:0000134,3.86e-10,46;CL:0000542,8.56e-09,13;CL:0000051,8.56e-09,13;CL:0000738,2.69e-08,17;CL:0002087,2.69e-08,17;CL:0000838,2.88e-08,12;CL:0000049,9.86e-08,19;CL:0000084,1.12e-07,11;CL:0000827,1.12e-07,11;CL:0000763,7.62e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.72e-14!45;UBERON:0003061!3.72e-14!45;UBERON:0002193!1.65e-12!48;UBERON:0002405!2.05e-10!70;UBERON:0002384!3.86e-10!46;UBERON:0004177!2.43e-09!29;UBERON:0002370!3.22e-07!23;UBERON:0000974!3.22e-07!23;UBERON:0004807!3.22e-07!23;UBERON:0005058!3.22e-07!23;UBERON:0003351!3.22e-07!23;UBERON:0009113!3.22e-07!23;UBERON:0003295!3.22e-07!23;UBERON:0009722!3.22e-07!23;UBERON:0005562!3.22e-07!23;UBERON:0007690!3.22e-07!23;UBERON:0005057!5.27e-07!51;UBERON:0003408!6.25e-07!24;UBERON:0006562!7.91e-07!24;UBERON:0001557!7.91e-07!24;UBERON:0001042!7.91e-07!24;UBERON:0008814!7.91e-07!24;UBERON:0009145!7.91e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.72e-14,45;UBERON:0003061,3.72e-14,45;UBERON:0002193,1.65e-12,48;UBERON:0002405,1.65e-12,48;UBERON:0002384,3.86e-10,46;UBERON:0004177,2.43e-09,29;UBERON:0005057,2.43e-09,29;UBERON:0000077,2.65e-08,35;UBERON:0002370,3.22e-07,23;UBERON:0000974,3.22e-07,23;UBERON:0004807,3.22e-07,23;UBERON:0005058,3.22e-07,23;UBERON:0003351,3.22e-07,23;UBERON:0009113,3.22e-07,23;UBERON:0003295,3.22e-07,23;UBERON:0009722,3.22e-07,23;UBERON:0005562,3.22e-07,23;UBERON:0007690,3.22e-07,23;UBERON:0003408,6.25e-07,24;UBERON:0006562,7.91e-07,24;UBERON:0001557,7.91e-07,24;UBERON:0001042,7.91e-07,24;UBERON:0008814,7.91e-07,24;UBERON:0009145,7.91e-07,24 | |||
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| ||
|short_description=p@chr4:155610108..155610159,+ | |||
}} | }} |
Latest revision as of 08:01, 5 August 2015
Short description: | p@chr4:155610108..155610159, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:155610108..155610159, + |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.92e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.92e-15 | 32 |
hematopoietic stem cell | 3.92e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.92e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 1.67e-12 | 25 |
connective tissue cell | 3.86e-10 | 46 |
mesenchymal cell | 3.86e-10 | 46 |
lymphocyte | 8.56e-09 | 13 |
common lymphoid progenitor | 8.56e-09 | 13 |
leukocyte | 2.69e-08 | 17 |
nongranular leukocyte | 2.69e-08 | 17 |
lymphoid lineage restricted progenitor cell | 2.88e-08 | 12 |
common myeloid progenitor | 9.86e-08 | 19 |
T cell | 1.12e-07 | 11 |
pro-T cell | 1.12e-07 | 11 |
myeloid cell | 7.62e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.72e-14 | 45 |
blood island | 3.72e-14 | 45 |
hemolymphoid system | 1.65e-12 | 48 |
immune system | 1.65e-12 | 48 |
connective tissue | 3.86e-10 | 46 |
hemopoietic organ | 2.43e-09 | 29 |
immune organ | 2.43e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 2.65e-08 | 35 |
thymus | 3.22e-07 | 23 |
neck | 3.22e-07 | 23 |
respiratory system epithelium | 3.22e-07 | 23 |
hemolymphoid system gland | 3.22e-07 | 23 |
pharyngeal epithelium | 3.22e-07 | 23 |
thymic region | 3.22e-07 | 23 |
pharyngeal gland | 3.22e-07 | 23 |
entire pharyngeal arch endoderm | 3.22e-07 | 23 |
thymus primordium | 3.22e-07 | 23 |
early pharyngeal endoderm | 3.22e-07 | 23 |
gland of gut | 6.25e-07 | 24 |
pharynx | 7.91e-07 | 24 |
upper respiratory tract | 7.91e-07 | 24 |
chordate pharynx | 7.91e-07 | 24 |
pharyngeal arch system | 7.91e-07 | 24 |
pharyngeal region of foregut | 7.91e-07 | 24 |