FFCP PHASE1:Mm9::chr4:34841000..34841008,+: Difference between revisions
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{{FFCP|EntrezGene=12640|HGNC=|MCL_coexpression_id=84|UniProt=P01216,A2AVN3|association_with_transcript=-19bp_to_ENSMUST00000029975,NM_009889,uc008sgq.1_5end|description=CAGE_peak_4_at_Cga_5end|id=chr4:34841000..34841008,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!4.66e-64!8;UBERON:0003296!4.66e-64!8;UBERON:0010133!4.66e-64!8;UBERON:0001894!3.26e-51!10;UBERON:0006222!3.26e-51!10;UBERON:0002780!3.51e-16!39;UBERON:0001890!3.51e-16!39;UBERON:0006240!3.51e-16!39;UBERON:0003080!9.20e-16!40;UBERON:0002616!9.30e-13!49;UBERON:0003056!9.30e-13!49;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0001049!5.51e-12!52;UBERON:0005068!5.51e-12!52;UBERON:0006241!5.51e-12!52;UBERON:0007135!5.51e-12!52;UBERON:0000033!8.91e-10!63;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0001017!2.44e-08!73;UBERON:0005743!2.44e-08!73;UBERON:0002368!3.72e-08!60;UBERON:0000073!4.26e-08!75;UBERON:0001016!4.26e-08!75;UBERON:0002530!1.76e-07!65;UBERON:0007811!5.79e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.68e-44,8;UBERON:0003296,6.68e-44,8;UBERON:0010133,6.68e-44,8;UBERON:0001894,2.37e-35,10;UBERON:0006222,2.37e-35,10;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9580238359053,0.540183282093931,0.258717367565509,0.428674070063185,1.41872186913819,0.713475270408282,1.64549020602121,3.04464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Cga}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12640 | |||
|HGNC= | |||
|MCL_coexpression_id=84 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P01216,uniprot:A2AVN3 | |||
|association_with_transcript=-19bp_to_ENSMUST00000029975,NM_009889,uc008sgq.1_5end | |||
|cluster_id=chr4:34841000..34841008,+ | |||
|description=CAGE_peak_4_at_Cga_5end | |||
|id=chr4:34841000..34841008,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!4.66e-64!8;UBERON:0003296!4.66e-64!8;UBERON:0010133!4.66e-64!8;UBERON:0001894!3.26e-51!10;UBERON:0006222!3.26e-51!10;UBERON:0002780!3.51e-16!39;UBERON:0001890!3.51e-16!39;UBERON:0006240!3.51e-16!39;UBERON:0003080!9.20e-16!40;UBERON:0002616!9.30e-13!49;UBERON:0003056!9.30e-13!49;UBERON:0000955!1.72e-12!50;UBERON:0006238!1.72e-12!50;UBERON:0001049!5.51e-12!52;UBERON:0005068!5.51e-12!52;UBERON:0006241!5.51e-12!52;UBERON:0007135!5.51e-12!52;UBERON:0000033!8.91e-10!63;UBERON:0002346!1.35e-08!71;UBERON:0003075!1.35e-08!71;UBERON:0007284!1.35e-08!71;UBERON:0001017!2.44e-08!73;UBERON:0005743!2.44e-08!73;UBERON:0002368!3.72e-08!60;UBERON:0000073!4.26e-08!75;UBERON:0001016!4.26e-08!75;UBERON:0002530!1.76e-07!65;UBERON:0007811!5.79e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.68e-44,8;UBERON:0003296,6.68e-44,8;UBERON:0010133,6.68e-44,8;UBERON:0001894,2.37e-35,10;UBERON:0006222,2.37e-35,10;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9580238359053,0.540183282093931,0.258717367565509,0.428674070063185,1.41872186913819,0.713475270408282,1.64549020602121,3.04464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Cga | |||
}} |
Revision as of 09:56, 5 August 2015
Short description: | p4@Cga |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cga_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | -19bp_to_ENSMUST00000029975, NM_009889, uc008sgq.1_5end |
EntrezGene: | 12640 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.68e-44 | 8 |
gland of diencephalon | 6.68e-44 | 8 |
neuroendocrine gland | 6.68e-44 | 8 |
diencephalon | 2.37e-35 | 10 |
future diencephalon | 2.37e-35 | 10 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |