Personal tools

FFCP PHASE1:Mm9::chr9:58884009..58884028,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=18007|HGNC=|MCL_coexpression_id=286|UniProt=E9QK04,E9QLA4,E9QLA3,Q7TQG5|association_with_transcript=219bp_to_ENSMUST00000068664,ENSMUST00000114096,ENSMUST00000114098,NM_001042752,NM_008684,uc009pxk.1,uc009pxl.1,uc009pxn.1_5end|description=CAGE_peak_2_at_Neo1_5end|id=chr9:58884009..58884028,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.35e-07!333;UBERON:0002048!2.71e-07!14;UBERON:0000117!2.71e-07!14;UBERON:0000171!2.71e-07!14;UBERON:0000170!2.71e-07!14;UBERON:0005597!2.71e-07!14;UBERON:0000118!2.71e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.30e-07,92;UBERON:0002048,2.29e-07,14;UBERON:0000117,2.29e-07,14;UBERON:0000171,2.29e-07,14;UBERON:0000170,2.29e-07,14;UBERON:0005597,2.29e-07,14;UBERON:0000118,2.29e-07,14;UBERON:0000479,6.36e-07,349|phase1_expression=5.76535849577258,1.04692622291808,1.36499771816861,2.41971369045464,1.50268718983904,1.51091344720701,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0.261199789138935,0.799962113967033,1.37645568640302,0.57423196411502,0.430761996159075,0.861884930743556,3.42042155021473,4.03248207615889,1.55211357458713,0,0,0,2.88851619751275,1.66234645358492,2.85837098767317,0,0,0,0,0,0,3.77690453926732,3.95370031756107,2.75320128242522,90.7573959443725,7.63088047331563,18.2339531669612,32.275363246331,42.5558721741102,1.43752564364972,0,0,0,1.28629718017973,8.88253663810146,14.9544906760458,2.63011399117477,3.1739458756322,1.90149421051854,5.76035704517525,37.3503814366679,0.449949858640699,0,0.7104801149461,4.19440154725767,4.2264013585371,2.07379224616955,2.02508907497536,1.68259969081106,8.2838785477103,6.84692476950002,1.34739879136449,1.43768206527355,1.83843757322004,8.8092704799511,11.8749224419225,9.83081812839958,2.90149833006426,2.74462930807229,3.64639359389732,9.77140496504833,6.75315132038016,11.9182633265912,6.48182888042069,5.97961059356232,2.98239113320481,0.681535739998656,0.529000920747499,4.34796733052517,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,2.80888840263504,8.01022516116871,3.11743205523443,6.71345191569646,5.91542363062058,7.69958864485907,2.54805239706646,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,2.2836775943812,0,3.41416919849097,5.20455980298408,7.30717147949139,5.5347719341454,4.37095657602605,5.76184664964954,3.39299796590124,3.70792451601561,10.4111536982336,0.884610551949874,9.86777784679196,6.8460870722722,6.78825354389311,5.59175283654366,4.9772735491963,8.16842156572475,1.53274233125155,0,0,0,7.63932260964596,5.03250663100489,1.63350657746724,3.12883776346098,6.64860189058859,7.68815764870372,10.5456820994042,12.4244023897386,6.59356944233493,1.0108910337347,2.73574412652416,2.73252930221678,4.13823787980251,3.24111833649629,3.76762044589288,5.23881043465224,5.25266253167884,4.59138450342671,6.20888089773638,1.94011193639558,5.10586416453112,7.2139960907219,7.67185063496512,7.22922847986555,7.66154766348766,8.23128545631774,6.76716507182877,0,0,0,4.34964122324554,3.51789089971644,2.34080679899319,3.31442629819294,3.73852040320067,5.55361606394562,3.95307706075693,6.43856163359086,7.58974725386602,6.25327429671226,8.37254066803386,11.6739085746032,9.5029991826466,7.90380415047782,13.8232611323183,7.78072809687271,7.40913209130848,1.32167513193519,2.90895623329899,6.61193576659225,4.87697010906921,5.28356591420583,3.83198696784351,2.66853652613844,2.47293313946327,1.89811624617805,3.29397909448022,3.51869292320377,2.38747766449381,3.11942539390592,2.69645822596266,1.94524244887225,5.57595565112228,3.22435431620239,3.99869794134051,5.63538678365402,5.49858585182348,2.52138233317913,3.85747009396752,2.52946148497029,2.06654207171443,1.41298855057237,3.08492909804501,1.48226313543574,0.83422552858047,1.17935397067922,0,0.202860121388503,0.241177159752417,1.01850340712568,1.72617682470486,0.810676133875177,0.823684239564244,0,0.744281895337007,1.5601883655728,2.02063102357689,0.717589654087649,0.964887042726734,4.98833613449833,3.7898282354097,7.98528384565927,7.80827394565865,7.04070744865506,13.7355131102289,20.2337094753112,16.7814937157707,17.8127712839996,12.6234873099802,12.437471955284,8.68475567993411,11.3972088031491,16.3453436197108,0,0,3.93411418415229,2.75936746304733,10.1146871692309,14.2998257642488,0.819674726883377,8.07906967053994,1.26203287766503,1.17131623288992,1.07711698866399,0.477937595905104,0.891194696329576,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.57057053137446,5.53566332312248,17.6284947630583,18.8948872850148,4.45419332025846,0,4.85561272309963,1.81394134178851,3.20628635585027,2.36241514304618,3.3817866273832,6.46070732920553,3.99887102425256,6.77345018930971,4.10847785316561,3.16255825724996,5.15677716240934,2.38307724027652,3.78128297465751,2.45781499187234,5.35842587578981,8.86701168211368,14.8046118609719,14.8094118541909,11.2652031172402,1.64270195644597,0.42366414172764,1.32317038832977,3.46261131177108,4.52100394748536,5.79004079310296,5.01363844813173,7.2221995887827,3.20628920292836,13.9068976507882,0,7.01715351074956,2.96311243791539,0.565105371014073,0.27338845544205,0.228778173206523,0.169978429993855,0,0.138199973804424,3.81868247206045,4.27053591334533,6.09958401380546,6.69633113095168,6.89991376847747,5.8957892211468,5.25970950900801,6.11635572367486,6.02038666563268,6.09190374471426,0.621339313086926,0.56369293868419,4.18646328923141,3.97100377097034,5.83353565032143,6.84547064431975,5.23763989021412,8.44972118249428,6.11960608766566,6.71099804324549,2.89900944991207,2.88030006257865,0.316011120628178,2.02725215290164,1.02710957164827,0.909445760844565,0.716106782669926,0.198681354781265,0.240390899039938,0.590758108698309,0.302899349844443,0.15241361331,0,0.292373642219257,0.192423683280659,0.116876902181569,3.62768613784338,0.887943813496259,0.448569283047378,0.503653849092235,5.21611903886914,3.94133198447482,3.11357761254351,2.14368379079066,1.50471631210609,2.25900737046827,5.06357760157895,4.01026859407578,3.09335728218638,2.74033007908257,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,1.55328093525546,0.93408612825759,4.38927360741134,4.26834014385335,6.32077464377565,1.67690530102386,4.04455718590031,6.44515510624684,3.91466608753899,6.09746498224449,6.31743029409494,5.0695859978048,6.22466926574051,4.30750934361459,5.6342134116285,6.31790158511746,5.23923060411381,6.72129090480162,5.78727661391115,6.59337441285291,6.77115032618228,2.05721551431249,5.6792257970988,6.67621331852499,6.68593516508711,5.36423468367385,6.43071019976741,5.67076715905595,4.73525480588117,6.51859746460137,7.85599180320834,8.18581625056802,4.0386837773981,6.95692773388472,6.50734732981057,7.52335782826451,9.49280196164194,7.25187986180766,7.30561583764214,9.94699326757986,8.82365676478062,9.97031693167812|short_description=p2@Neo1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:18007
|HGNC=
|MCL_coexpression_id=286
|TSSclassifier=NA
|UniProt=uniprot:E9QK04,uniprot:E9QLA4,uniprot:E9QLA3,uniprot:Q7TQG5
|association_with_transcript=219bp_to_ENSMUST00000068664,ENSMUST00000114096,ENSMUST00000114098,NM_001042752,NM_008684,uc009pxk.1,uc009pxl.1,uc009pxn.1_5end
|cluster_id=chr9:58884009..58884028,-
|description=CAGE_peak_2_at_Neo1_5end
|id=chr9:58884009..58884028,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.35e-07!333;UBERON:0002048!2.71e-07!14;UBERON:0000117!2.71e-07!14;UBERON:0000171!2.71e-07!14;UBERON:0000170!2.71e-07!14;UBERON:0005597!2.71e-07!14;UBERON:0000118!2.71e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.30e-07,92;UBERON:0002048,2.29e-07,14;UBERON:0000117,2.29e-07,14;UBERON:0000171,2.29e-07,14;UBERON:0000170,2.29e-07,14;UBERON:0005597,2.29e-07,14;UBERON:0000118,2.29e-07,14;UBERON:0000479,6.36e-07,349
|phase1_expression=5.76535849577258,1.04692622291808,1.36499771816861,2.41971369045464,1.50268718983904,1.51091344720701,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08207792725135,0,0.261199789138935,0.799962113967033,1.37645568640302,0.57423196411502,0.430761996159075,0.861884930743556,3.42042155021473,4.03248207615889,1.55211357458713,0,0,0,2.88851619751275,1.66234645358492,2.85837098767317,0,0,0,0,0,0,3.77690453926732,3.95370031756107,2.75320128242522,90.7573959443725,7.63088047331563,18.2339531669612,32.275363246331,42.5558721741102,1.43752564364972,0,0,0,1.28629718017973,8.88253663810146,14.9544906760458,2.63011399117477,3.1739458756322,1.90149421051854,5.76035704517525,37.3503814366679,0.449949858640699,0,0.7104801149461,4.19440154725767,4.2264013585371,2.07379224616955,2.02508907497536,1.68259969081106,8.2838785477103,6.84692476950002,1.34739879136449,1.43768206527355,1.83843757322004,8.8092704799511,11.8749224419225,9.83081812839958,2.90149833006426,2.74462930807229,3.64639359389732,9.77140496504833,6.75315132038016,11.9182633265912,6.48182888042069,5.97961059356232,2.98239113320481,0.681535739998656,0.529000920747499,4.34796733052517,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,2.80888840263504,8.01022516116871,3.11743205523443,6.71345191569646,5.91542363062058,7.69958864485907,2.54805239706646,7.11066703153331,1.08245520505607,0.760079596425296,1.01104889002957,2.2836775943812,0,3.41416919849097,5.20455980298408,7.30717147949139,5.5347719341454,4.37095657602605,5.76184664964954,3.39299796590124,3.70792451601561,10.4111536982336,0.884610551949874,9.86777784679196,6.8460870722722,6.78825354389311,5.59175283654366,4.9772735491963,8.16842156572475,1.53274233125155,0,0,0,7.63932260964596,5.03250663100489,1.63350657746724,3.12883776346098,6.64860189058859,7.68815764870372,10.5456820994042,12.4244023897386,6.59356944233493,1.0108910337347,2.73574412652416,2.73252930221678,4.13823787980251,3.24111833649629,3.76762044589288,5.23881043465224,5.25266253167884,4.59138450342671,6.20888089773638,1.94011193639558,5.10586416453112,7.2139960907219,7.67185063496512,7.22922847986555,7.66154766348766,8.23128545631774,6.76716507182877,0,0,0,4.34964122324554,3.51789089971644,2.34080679899319,3.31442629819294,3.73852040320067,5.55361606394562,3.95307706075693,6.43856163359086,7.58974725386602,6.25327429671226,8.37254066803386,11.6739085746032,9.5029991826466,7.90380415047782,13.8232611323183,7.78072809687271,7.40913209130848,1.32167513193519,2.90895623329899,6.61193576659225,4.87697010906921,5.28356591420583,3.83198696784351,2.66853652613844,2.47293313946327,1.89811624617805,3.29397909448022,3.51869292320377,2.38747766449381,3.11942539390592,2.69645822596266,1.94524244887225,5.57595565112228,3.22435431620239,3.99869794134051,5.63538678365402,5.49858585182348,2.52138233317913,3.85747009396752,2.52946148497029,2.06654207171443,1.41298855057237,3.08492909804501,1.48226313543574,0.83422552858047,1.17935397067922,0,0.202860121388503,0.241177159752417,1.01850340712568,1.72617682470486,0.810676133875177,0.823684239564244,0,0.744281895337007,1.5601883655728,2.02063102357689,0.717589654087649,0.964887042726734,4.98833613449833,3.7898282354097,7.98528384565927,7.80827394565865,7.04070744865506,13.7355131102289,20.2337094753112,16.7814937157707,17.8127712839996,12.6234873099802,12.437471955284,8.68475567993411,11.3972088031491,16.3453436197108,0,0,3.93411418415229,2.75936746304733,10.1146871692309,14.2998257642488,0.819674726883377,8.07906967053994,1.26203287766503,1.17131623288992,1.07711698866399,0.477937595905104,0.891194696329576,0.283076530788832,0.809621403349789,0.584511715822624,0.790575555893047,2.57057053137446,5.53566332312248,17.6284947630583,18.8948872850148,4.45419332025846,0,4.85561272309963,1.81394134178851,3.20628635585027,2.36241514304618,3.3817866273832,6.46070732920553,3.99887102425256,6.77345018930971,4.10847785316561,3.16255825724996,5.15677716240934,2.38307724027652,3.78128297465751,2.45781499187234,5.35842587578981,8.86701168211368,14.8046118609719,14.8094118541909,11.2652031172402,1.64270195644597,0.42366414172764,1.32317038832977,3.46261131177108,4.52100394748536,5.79004079310296,5.01363844813173,7.2221995887827,3.20628920292836,13.9068976507882,0,7.01715351074956,2.96311243791539,0.565105371014073,0.27338845544205,0.228778173206523,0.169978429993855,0,0.138199973804424,3.81868247206045,4.27053591334533,6.09958401380546,6.69633113095168,6.89991376847747,5.8957892211468,5.25970950900801,6.11635572367486,6.02038666563268,6.09190374471426,0.621339313086926,0.56369293868419,4.18646328923141,3.97100377097034,5.83353565032143,6.84547064431975,5.23763989021412,8.44972118249428,6.11960608766566,6.71099804324549,2.89900944991207,2.88030006257865,0.316011120628178,2.02725215290164,1.02710957164827,0.909445760844565,0.716106782669926,0.198681354781265,0.240390899039938,0.590758108698309,0.302899349844443,0.15241361331,0,0.292373642219257,0.192423683280659,0.116876902181569,3.62768613784338,0.887943813496259,0.448569283047378,0.503653849092235,5.21611903886914,3.94133198447482,3.11357761254351,2.14368379079066,1.50471631210609,2.25900737046827,5.06357760157895,4.01026859407578,3.09335728218638,2.74033007908257,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,1.55328093525546,0.93408612825759,4.38927360741134,4.26834014385335,6.32077464377565,1.67690530102386,4.04455718590031,6.44515510624684,3.91466608753899,6.09746498224449,6.31743029409494,5.0695859978048,6.22466926574051,4.30750934361459,5.6342134116285,6.31790158511746,5.23923060411381,6.72129090480162,5.78727661391115,6.59337441285291,6.77115032618228,2.05721551431249,5.6792257970988,6.67621331852499,6.68593516508711,5.36423468367385,6.43071019976741,5.67076715905595,4.73525480588117,6.51859746460137,7.85599180320834,8.18581625056802,4.0386837773981,6.95692773388472,6.50734732981057,7.52335782826451,9.49280196164194,7.25187986180766,7.30561583764214,9.94699326757986,8.82365676478062,9.97031693167812
|short_description=p2@Neo1
}}

Revision as of 09:58, 5 August 2015

Short description:p2@Neo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Neo1_5end
Coexpression cluster:MCL_coexpression_mm9:286
Association with transcript: 219bp_to_ENSMUST00000068664, ENSMUST00000114096, ENSMUST00000114098, NM_001042752, NM_008684, uc009pxk.1, uc009pxl.1, uc009pxn.1_5end
EntrezGene:18007
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Neo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B790.76
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C332.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C442.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D137.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H110.41
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B58.23
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G111.67
heart, neonate N20.CNhs11127.821-26I69.50
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D213.82
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G73.86
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F87.99
lung, embryo E15.CNhs11020.432-17C57.81
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A613.74
lung, embryo E18.CNhs10583.1287-20I620.23
lung, neonate N00.CNhs11224.640-42C616.78
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A312.62
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C711.40
lung, neonate N30.CNhs11133.1394-42H216.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A314.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I418.89
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H35.79
skin, neonate N06.CNhs11097.693-20I55.01
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D46.70
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.19
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C69.95
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.30e-0792
lung2.29e-0714
respiratory tube2.29e-0714
respiration organ2.29e-0714
pair of lungs2.29e-0714
lung primordium2.29e-0714
lung bud2.29e-0714
tissue6.36e-07349
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:58884009..58884028,-&oldid=3886772"