FFCP PHASE1:Mm9::chr9:70390679..70390727,+: Difference between revisions
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{{FFCP|EntrezGene=66660|HGNC=|MCL_coexpression_id=317|UniProt=Q8CH25|association_with_transcript=0bp_to_ENSMUST00000049263_5end|description=CAGE_peak_1_at_Sltm_5end|id=chr9:70390679..70390727,+|ontology_enrichment_celltype=CL:0000791!2.01e-07!9;CL:0000789!2.01e-07!9;CL:0002420!2.01e-07!9;CL:0002419!2.01e-07!9;CL:0000790!2.01e-07!9;CL:0000838!2.53e-07!12;CL:0000624!8.22e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,2.01e-07,9;CL:0000789,2.01e-07,9;CL:0002420,2.01e-07,9;CL:0002419,2.01e-07,9;CL:0000790,2.01e-07,9;CL:0000838,2.53e-07,12;CL:0000624,8.22e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.01e-20!128;UBERON:0001555!4.01e-20!128;UBERON:0007026!4.01e-20!128;UBERON:0004921!5.55e-20!126;UBERON:0004185!5.55e-20!126;UBERON:0004119!3.17e-19!130;UBERON:0000925!3.17e-19!130;UBERON:0006595!3.17e-19!130;UBERON:0005911!4.81e-12!69;UBERON:0003929!2.02e-11!55;UBERON:0001041!2.24e-11!92;UBERON:0000077!3.52e-11!97;UBERON:0005409!1.90e-09!59;UBERON:0005057!1.24e-08!51;UBERON:0002405!4.70e-08!70;UBERON:0004177!1.15e-07!29;UBERON:0000160!1.92e-07!43;UBERON:0000490!3.66e-07!66;UBERON:0006562!3.81e-07!24;UBERON:0001557!3.81e-07!24;UBERON:0001042!3.81e-07!24;UBERON:0008814!3.81e-07!24;UBERON:0009145!3.81e-07!24;UBERON:0002370!4.96e-07!23;UBERON:0000974!4.96e-07!23;UBERON:0004807!4.96e-07!23;UBERON:0005058!4.96e-07!23;UBERON:0003351!4.96e-07!23;UBERON:0009113!4.96e-07!23;UBERON:0003295!4.96e-07!23;UBERON:0009722!4.96e-07!23;UBERON:0005562!4.96e-07!23;UBERON:0007690!4.96e-07!23;UBERON:0000065!5.13e-07!41;UBERON:0001004!6.76e-07!42;UBERON:0003408!8.21e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.73e-19,116;UBERON:0001555,6.73e-19,116;UBERON:0007026,6.73e-19,116;UBERON:0004921,8.77e-19,114;UBERON:0004119,5.50e-18,118;UBERON:0000925,5.50e-18,118;UBERON:0006595,5.50e-18,118;UBERON:0005911,4.81e-12,69;UBERON:0003929,2.02e-11,55;UBERON:0001041,1.55e-10,80;UBERON:0005409,5.91e-09,47;UBERON:0004177,1.15e-07,29;UBERON:0005057,1.15e-07,29;UBERON:0000077,1.74e-07,35;UBERON:0000490,3.66e-07,66;UBERON:0006562,3.81e-07,24;UBERON:0001557,3.81e-07,24;UBERON:0001042,3.81e-07,24;UBERON:0008814,3.81e-07,24;UBERON:0009145,3.81e-07,24;UBERON:0000160,3.98e-07,31;UBERON:0002370,4.96e-07,23;UBERON:0000974,4.96e-07,23;UBERON:0004807,4.96e-07,23;UBERON:0005058,4.96e-07,23;UBERON:0003351,4.96e-07,23;UBERON:0009113,4.96e-07,23;UBERON:0003295,4.96e-07,23;UBERON:0009722,4.96e-07,23;UBERON:0005562,4.96e-07,23;UBERON:0007690,4.96e-07,23;UBERON:0000065,5.13e-07,41;UBERON:0001004,6.76e-07,42;UBERON:0003408,8.21e-07,24|phase1_expression=18.4171174170513,45.3668029931169,30.9399482784885,68.0544475440368,55.0985302940982,42.8092143375319,41.5830500260036,68.3062381005938,95.5955423409817,87.5401328444256,64.7203919892409,61.5043345854044,67.9666897826887,63.5546325586111,35.3096347524602,42.5198061518634,25.8837894907414,50.3162153746389,57.4509476808045,44.9853030905912,17.7740476415736,23.2340825810072,29.7767759618386,32.638454249855,22.0232909824483,33.3054539186712,32.7379117080897,26.0720191549926,23.1828571736776,34.7801579068704,25.49900872536,15.8757668364908,12.3012957516914,0,43.6165945824425,22.7741464141135,42.2630567463104,23.0192396905299,21.8773896466664,28.7938059185589,24.1174910092716,28.6879103682547,35.4422557712742,17.6255545165808,16.5244397887809,7.89251034295231,3.9119567217402,3.2703773457067,3.73466510648602,5.05517737593137,3.77963338388479,4.31257693094915,61.9117816353047,81.2405599052706,59.4886024482161,11.8339340576536,15.1862723167541,15.4701627683233,8.9019242778223,6.87688273053643,7.60597684207415,2.37191172448392,5.33576877666684,8.09909745553259,5.93319817540185,4.9733608046227,4.19440154725767,4.99483796918021,11.3021677416241,5.26523159493594,7.78202357000113,5.42736870367227,9.27647871996777,12.4940615199253,8.91362880469598,11.9498442259303,12.1127469099328,17.4931653176707,18.5863905240055,7.51751840062105,6.77008562657831,6.25096044668112,8.09630697104005,15.1945904708554,16.9606055032259,18.5616008848411,15.3761415263031,10.6247684120421,17.1898458866328,19.8753203080846,45.2188602374617,30.1148356943485,12.9194553404473,18.3499085156858,19.4932925234301,35.3941240806895,19.9431076587088,9.03280709663706,6.49465011507172,7.42013106471715,17.7462708918617,20.5322363862909,28.028576367731,21.3320010945999,25.9789249213457,26.6027858748854,23.7596489156948,28.2034182906078,77.6813650941515,22.5632051378534,11.6235168933311,13.7009465240464,13.8369298353635,14.9215414147096,21.1659672844269,15.0799909595611,17.0564527736718,29.3536694547421,23.8844849026466,19.8973225435313,24.0717255121829,27.6378894287077,29.8226817948995,31.6203260772471,32.2547928492721,31.4212177906567,37.2625037213412,20.9965955847693,27.3200988207089,20.9706895166752,25.1625331550245,24.2512899577828,24.8568777874955,30.4301394223093,26.1812936145046,29.6901511413996,20.1641940423626,28.9868241521517,16.9324248150562,29.2514179682199,19.3879460014429,14.48383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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66660 | |||
|HGNC= | |||
|MCL_coexpression_id=317 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8CH25 | |||
|association_with_transcript=0bp_to_ENSMUST00000049263_5end | |||
|cluster_id=chr9:70390679..70390727,+ | |||
|description=CAGE_peak_1_at_Sltm_5end | |||
|id=chr9:70390679..70390727,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.01e-07!9;CL:0000789!2.01e-07!9;CL:0002420!2.01e-07!9;CL:0002419!2.01e-07!9;CL:0000790!2.01e-07!9;CL:0000838!2.53e-07!12;CL:0000624!8.22e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.01e-07,9;CL:0000789,2.01e-07,9;CL:0002420,2.01e-07,9;CL:0002419,2.01e-07,9;CL:0000790,2.01e-07,9;CL:0000838,2.53e-07,12;CL:0000624,8.22e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.01e-20!128;UBERON:0001555!4.01e-20!128;UBERON:0007026!4.01e-20!128;UBERON:0004921!5.55e-20!126;UBERON:0004185!5.55e-20!126;UBERON:0004119!3.17e-19!130;UBERON:0000925!3.17e-19!130;UBERON:0006595!3.17e-19!130;UBERON:0005911!4.81e-12!69;UBERON:0003929!2.02e-11!55;UBERON:0001041!2.24e-11!92;UBERON:0000077!3.52e-11!97;UBERON:0005409!1.90e-09!59;UBERON:0005057!1.24e-08!51;UBERON:0002405!4.70e-08!70;UBERON:0004177!1.15e-07!29;UBERON:0000160!1.92e-07!43;UBERON:0000490!3.66e-07!66;UBERON:0006562!3.81e-07!24;UBERON:0001557!3.81e-07!24;UBERON:0001042!3.81e-07!24;UBERON:0008814!3.81e-07!24;UBERON:0009145!3.81e-07!24;UBERON:0002370!4.96e-07!23;UBERON:0000974!4.96e-07!23;UBERON:0004807!4.96e-07!23;UBERON:0005058!4.96e-07!23;UBERON:0003351!4.96e-07!23;UBERON:0009113!4.96e-07!23;UBERON:0003295!4.96e-07!23;UBERON:0009722!4.96e-07!23;UBERON:0005562!4.96e-07!23;UBERON:0007690!4.96e-07!23;UBERON:0000065!5.13e-07!41;UBERON:0001004!6.76e-07!42;UBERON:0003408!8.21e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.73e-19,116;UBERON:0001555,6.73e-19,116;UBERON:0007026,6.73e-19,116;UBERON:0004921,8.77e-19,114;UBERON:0004119,5.50e-18,118;UBERON:0000925,5.50e-18,118;UBERON:0006595,5.50e-18,118;UBERON:0005911,4.81e-12,69;UBERON:0003929,2.02e-11,55;UBERON:0001041,1.55e-10,80;UBERON:0005409,5.91e-09,47;UBERON:0004177,1.15e-07,29;UBERON:0005057,1.15e-07,29;UBERON:0000077,1.74e-07,35;UBERON:0000490,3.66e-07,66;UBERON:0006562,3.81e-07,24;UBERON:0001557,3.81e-07,24;UBERON:0001042,3.81e-07,24;UBERON:0008814,3.81e-07,24;UBERON:0009145,3.81e-07,24;UBERON:0000160,3.98e-07,31;UBERON:0002370,4.96e-07,23;UBERON:0000974,4.96e-07,23;UBERON:0004807,4.96e-07,23;UBERON:0005058,4.96e-07,23;UBERON:0003351,4.96e-07,23;UBERON:0009113,4.96e-07,23;UBERON:0003295,4.96e-07,23;UBERON:0009722,4.96e-07,23;UBERON:0005562,4.96e-07,23;UBERON:0007690,4.96e-07,23;UBERON:0000065,5.13e-07,41;UBERON:0001004,6.76e-07,42;UBERON:0003408,8.21e-07,24 | |||
|phase1_expression=18.4171174170513,45.3668029931169,30.9399482784885,68.0544475440368,55.0985302940982,42.8092143375319,41.5830500260036,68.3062381005938,95.5955423409817,87.5401328444256,64.7203919892409,61.5043345854044,67.9666897826887,63.5546325586111,35.3096347524602,42.5198061518634,25.8837894907414,50.3162153746389,57.4509476808045,44.9853030905912,17.7740476415736,23.2340825810072,29.7767759618386,32.638454249855,22.0232909824483,33.3054539186712,32.7379117080897,26.0720191549926,23.1828571736776,34.7801579068704,25.49900872536,15.8757668364908,12.3012957516914,0,43.6165945824425,22.7741464141135,42.2630567463104,23.0192396905299,21.8773896466664,28.7938059185589,24.1174910092716,28.6879103682547,35.4422557712742,17.6255545165808,16.5244397887809,7.89251034295231,3.9119567217402,3.2703773457067,3.73466510648602,5.05517737593137,3.77963338388479,4.31257693094915,61.9117816353047,81.2405599052706,59.4886024482161,11.8339340576536,15.1862723167541,15.4701627683233,8.9019242778223,6.87688273053643,7.60597684207415,2.37191172448392,5.33576877666684,8.09909745553259,5.93319817540185,4.9733608046227,4.19440154725767,4.99483796918021,11.3021677416241,5.26523159493594,7.78202357000113,5.42736870367227,9.27647871996777,12.4940615199253,8.91362880469598,11.9498442259303,12.1127469099328,17.4931653176707,18.5863905240055,7.51751840062105,6.77008562657831,6.25096044668112,8.09630697104005,15.1945904708554,16.9606055032259,18.5616008848411,15.3761415263031,10.6247684120421,17.1898458866328,19.8753203080846,45.2188602374617,30.1148356943485,12.9194553404473,18.3499085156858,19.4932925234301,35.3941240806895,19.9431076587088,9.03280709663706,6.49465011507172,7.42013106471715,17.7462708918617,20.5322363862909,28.028576367731,21.3320010945999,25.9789249213457,26.6027858748854,23.7596489156948,28.2034182906078,77.6813650941515,22.5632051378534,11.6235168933311,13.7009465240464,13.8369298353635,14.9215414147096,21.1659672844269,15.0799909595611,17.0564527736718,29.3536694547421,23.8844849026466,19.8973225435313,24.0717255121829,27.6378894287077,29.8226817948995,31.6203260772471,32.2547928492721,31.4212177906567,37.2625037213412,20.9965955847693,27.3200988207089,20.9706895166752,25.1625331550245,24.2512899577828,24.8568777874955,30.4301394223093,26.1812936145046,29.6901511413996,20.1641940423626,28.9868241521517,16.9324248150562,29.2514179682199,19.3879460014429,14.4838325793088,18.0062129805349,22.4550178575215,28.3031836469524,25.1102891758306,22.6758173434544,30.2682943764648,9.91612767491074,20.6125627382923,23.929352886297,17.0972671293508,27.5266776733342,24.0293994900295,24.4880742325453,15.723707078661,28.7907406798426,24.4480511758979,23.3014069504386,19.2626968458017,19.9347150983932,17.4660199617184,15.6251525486239,20.8570085652248,21.4431286913456,20.4629871380359,27.0956135413615,31.6434077815029,21.7219001885794,23.4759473633106,28.6172897696871,24.8539978623065,23.9309625667245,31.9411276649685,32.1743621303115,29.2249099157168,31.3897843834608,29.8829140329805,16.423195291213,23.4559038579043,30.412720872014,36.9080850060717,30.0210359190575,25.4902338990829,29.4208018157597,24.7048432086016,36.1922700672388,27.2570366696377,32.1690743746548,34.1551375288604,42.1469197255654,36.6419942788036,5.87970492954553,24.2206846732625,28.1769339182701,23.6235540300565,25.407775818959,27.8439204964565,25.800507146697,30.8505209277369,28.4167697392888,27.6409647184833,29.3488100816277,28.5305130774521,27.9113773060748,33.2795926329584,28.1975568730019,24.3588931349941,22.1524491049835,30.4957905697859,25.7795010572306,19.4938603363538,41.6927798929328,27.1662891798007,32.1398803307997,35.8662006684899,31.3945473663346,33.2886029740723,31.5927955184894,14.7803301180978,24.4447464663039,24.2735472658519,26.0506175600237,30.8211513692941,25.2326259339175,26.9284434043762,31.369393677132,32.7767740680187,26.4694915971429,35.2306126638837,26.7661721892138,31.5334947707695,36.1899081454253,23.9318500880232,28.5223278351041,27.869611376778,20.5504755184374,18.9882932279369,11.4754461763673,26.7619182836635,22.085575359138,25.7689571235781,28.2204651029967,24.1358485932078,20.4974780155803,28.8738061404609,28.3367491172426,23.6727244908163,30.4371589018823,37.2732727049296,28.8138372972785,11.2181330310371,14.6598263418218,25.9003093066881,35.84118735179,11.6534705354391,20.5580018736031,31.497048319235,18.6040192514887,28.2840336108413,28.6855405416725,27.2650297108129,23.5288269733916,40.4527050157844,34.7881408297496,49.5050607591297,28.5969268833182,16.0254373687866,6.07985813778946,14.5749183821483,17.2020026633005,11.9507107793387,12.5057255657612,6.08929898229199,22.0591405579888,11.4389318266463,32.1971461160244,73.7041550648416,43.1110019278068,35.584625707612,31.514298816828,40.5428022370301,37.018066251991,20.9530591271876,32.9780799939856,18.1620443807636,26.6680119412385,35.0365330028725,40.3247971777024,30.4274970364675,36.0354271586973,38.9065037459769,32.3387938702352,36.2774834845743,19.770999598821,31.10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| |||
|short_description=p1@Sltm | |||
}} |
Revision as of 13:44, 5 August 2015
Short description: | p1@Sltm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sltm_5end |
Coexpression cluster: | MCL_coexpression_mm9:317 |
Association with transcript: | 0bp_to_ENSMUST00000049263_5end |
EntrezGene: | 66660 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.01e-07 | 9 |
alpha-beta T cell | 2.01e-07 | 9 |
immature T cell | 2.01e-07 | 9 |
mature T cell | 2.01e-07 | 9 |
immature alpha-beta T cell | 2.01e-07 | 9 |
lymphoid lineage restricted progenitor cell | 2.53e-07 | 12 |
CD4-positive, alpha-beta T cell | 8.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
digestive system | 6.73e-19 | 116 |
digestive tract | 6.73e-19 | 116 |
primitive gut | 6.73e-19 | 116 |
subdivision of digestive tract | 8.77e-19 | 114 |
endoderm-derived structure | 5.50e-18 | 118 |
endoderm | 5.50e-18 | 118 |
presumptive endoderm | 5.50e-18 | 118 |
endo-epithelium | 4.81e-12 | 69 |
gut epithelium | 2.02e-11 | 55 |
foregut | 1.55e-10 | 80 |
gastrointestinal system | 5.91e-09 | 47 |
hemopoietic organ | 1.15e-07 | 29 |
immune organ | 1.15e-07 | 29 |
mixed endoderm/mesoderm-derived structure | 1.74e-07 | 35 |
unilaminar epithelium | 3.66e-07 | 66 |
pharynx | 3.81e-07 | 24 |
upper respiratory tract | 3.81e-07 | 24 |
chordate pharynx | 3.81e-07 | 24 |
pharyngeal arch system | 3.81e-07 | 24 |
pharyngeal region of foregut | 3.81e-07 | 24 |
intestine | 3.98e-07 | 31 |
thymus | 4.96e-07 | 23 |
neck | 4.96e-07 | 23 |
respiratory system epithelium | 4.96e-07 | 23 |
hemolymphoid system gland | 4.96e-07 | 23 |
pharyngeal epithelium | 4.96e-07 | 23 |
thymic region | 4.96e-07 | 23 |
pharyngeal gland | 4.96e-07 | 23 |
entire pharyngeal arch endoderm | 4.96e-07 | 23 |
thymus primordium | 4.96e-07 | 23 |
early pharyngeal endoderm | 4.96e-07 | 23 |
respiratory tract | 5.13e-07 | 41 |
respiratory system | 6.76e-07 | 42 |
gland of gut | 8.21e-07 | 24 |