FFCP PHASE1:Mm9::chr3:102877932..102877956,+: Difference between revisions
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{{FFCP|EntrezGene=229665|HGNC=|MCL_coexpression_id=14|UniProt=F8VPY9,Q3V1D3|association_with_transcript=0bp_to_ENSMUST00000090715,ENSMUST00000155034,NM_001033303,uc008qso.1,uc008qsp.1_5end|description=CAGE_peak_1_at_Ampd1_5end|id=chr3:102877932..102877956,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!3.12e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.99e-11,22;UBERON:0000026,1.93e-07,12;UBERON:0004708,1.93e-07,12;UBERON:0002101,1.93e-07,12;UBERON:0004357,1.93e-07,12;UBERON:0004347,1.93e-07,12;UBERON:0005732,1.93e-07,12;UBERON:0005733,1.93e-07,12;UBERON:0005418,3.50e-07,5;UBERON:0002472,3.50e-07,5;UBERON:0008784,3.50e-07,5;UBERON:0006058,3.50e-07,5;UBERON:0004709,3.50e-07,5;UBERON:0002529,3.50e-07,5;UBERON:0010538,3.50e-07,5;UBERON:0005420,3.50e-07,5;UBERON:0010758,3.50e-07,5;UBERON:0000978,3.50e-07,5;UBERON:0002103,3.50e-07,5;UBERON:0000376,3.50e-07,5;UBERON:0000154,3.50e-07,5;UBERON:0010709,3.50e-07,5;UBERON:0005730,3.50e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85083185038834,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,247.74395711241,0,0,0,0,0,0,0,0,0,0,36.082105991223,0,0,0.867426633830679,4.26251669636998,4.84292544237723,1.95939432718409,5.17390311397101,1.25666591329675,0,3.7595832799177,125.614698376882,202.046795584314,237.183790826463,210.435859860686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,89.8218327804872,0,9.25944165900485,0,0.229902104433473,2.88099407688559,6.32960234910003,2.10913147369116,5.89323113310309,4.40398105430725,4.9153640440413,0,0.378212160335639,1.23165786914764,5.91828477554452,2.78047249225598,39.0042426504827,13.7874031393322,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,1.03093969057675,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.913988100877831,0,0.407302655690628,0,0.210407459670956,0.316182685621286,0,0.470996183524124,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,1.01850340712568,0,0.486405680325106,2.47105271869273,8.62609239164127,0.372140947668503,5.61667811606209,0,5.56131981917928,0,0,0,0.651859905768103,0,0,0.335012514883631,0.714130922658041,0.390267295715598,1.7339865851681,1.7717175171902,0.159454768657487,2.45794972073607,3.10832967358612,0,0,0,8.35999264132362,3.58717770196152,0,0,0,1483.7716391801,0,0,0,0,0,0,0,0,0,0,0.283880170416537,4.45164009168138,3.09485222771795,0,0,0,0.302323556964751,0,5.31543407185391,0,0.516856586336442,0,18.5378636760055,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,1.54369878638473,147.902968888508,34.7148517396197,26.0551835689633,11.340372680298,9.19189038572343,0,6.86073617438886,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.269728692769641,1.07449492442937,3.92633912976044,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,171.089823717172,0,0.202725215290164,0.821687657318618,0.649604114888975,1.25318686967237,1.39076948346885,1.20195449519969,2.80610101631697,1.00966449948148,0.228620419965,0.100826185136841,0.194915761479505,0,0,78.4487127308631,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,2.56100408631201,23.0951381214879,7.96530017986333,22.9804385562518,98.6775471439172,106.108054478031,97.8803589255037,80.8631077644152,96.5756132581813,94.8790497171963,92.7987339026535,96.485904674138,84.2578329578847,90.9720950350671,73.1230096712038,73.3055037762079,90.6588981767274,88.7609488410416,96.3462599203017,88.5604272735094,83.4526664815623,84.4462680633829,79.8047545922004,78.7761999471508,79.0248842810377,68.1350552624013,73.3342214767654,93.7107593668423,69.1642155663935,66.786039050632,62.6123496049625,77.9332311165409,54.0138510747196,41.9681770935749,85.6189686910195,61.4531214578133,113.625269248893,169.193618464668,286.35677699122|short_description=p1@Ampd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:229665 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPY9,uniprot:Q3V1D3 | |||
|association_with_transcript=0bp_to_ENSMUST00000090715,ENSMUST00000155034,NM_001033303,uc008qso.1,uc008qsp.1_5end | |||
|cluster_id=chr3:102877932..102877956,+ | |||
|description=CAGE_peak_1_at_Ampd1_5end | |||
|id=chr3:102877932..102877956,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.12e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.99e-11,22;UBERON:0000026,1.93e-07,12;UBERON:0004708,1.93e-07,12;UBERON:0002101,1.93e-07,12;UBERON:0004357,1.93e-07,12;UBERON:0004347,1.93e-07,12;UBERON:0005732,1.93e-07,12;UBERON:0005733,1.93e-07,12;UBERON:0005418,3.50e-07,5;UBERON:0002472,3.50e-07,5;UBERON:0008784,3.50e-07,5;UBERON:0006058,3.50e-07,5;UBERON:0004709,3.50e-07,5;UBERON:0002529,3.50e-07,5;UBERON:0010538,3.50e-07,5;UBERON:0005420,3.50e-07,5;UBERON:0010758,3.50e-07,5;UBERON:0000978,3.50e-07,5;UBERON:0002103,3.50e-07,5;UBERON:0000376,3.50e-07,5;UBERON:0000154,3.50e-07,5;UBERON:0010709,3.50e-07,5;UBERON:0005730,3.50e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85083185038834,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,247.74395711241,0,0,0,0,0,0,0,0,0,0,36.082105991223,0,0,0.867426633830679,4.26251669636998,4.84292544237723,1.95939432718409,5.17390311397101,1.25666591329675,0,3.7595832799177,125.614698376882,202.046795584314,237.183790826463,210.435859860686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,89.8218327804872,0,9.25944165900485,0,0.229902104433473,2.88099407688559,6.32960234910003,2.10913147369116,5.89323113310309,4.40398105430725,4.9153640440413,0,0.378212160335639,1.23165786914764,5.91828477554452,2.78047249225598,39.0042426504827,13.7874031393322,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,1.03093969057675,0,0,0.380451252225118,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0,0.913988100877831,0,0.407302655690628,0,0.210407459670956,0.316182685621286,0,0.470996183524124,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,1.01850340712568,0,0.486405680325106,2.47105271869273,8.62609239164127,0.372140947668503,5.61667811606209,0,5.56131981917928,0,0,0,0.651859905768103,0,0,0.335012514883631,0.714130922658041,0.390267295715598,1.7339865851681,1.7717175171902,0.159454768657487,2.45794972073607,3.10832967358612,0,0,0,8.35999264132362,3.58717770196152,0,0,0,1483.7716391801,0,0,0,0,0,0,0,0,0,0,0.283880170416537,4.45164009168138,3.09485222771795,0,0,0,0.302323556964751,0,5.31543407185391,0,0.516856586336442,0,18.5378636760055,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,1.54369878638473,147.902968888508,34.7148517396197,26.0551835689633,11.340372680298,9.19189038572343,0,6.86073617438886,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,0,0,0.269728692769641,1.07449492442937,3.92633912976044,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,171.089823717172,0,0.202725215290164,0.821687657318618,0.649604114888975,1.25318686967237,1.39076948346885,1.20195449519969,2.80610101631697,1.00966449948148,0.228620419965,0.100826185136841,0.194915761479505,0,0,78.4487127308631,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,2.56100408631201,23.0951381214879,7.96530017986333,22.9804385562518,98.6775471439172,106.108054478031,97.8803589255037,80.8631077644152,96.5756132581813,94.8790497171963,92.7987339026535,96.485904674138,84.2578329578847,90.9720950350671,73.1230096712038,73.3055037762079,90.6588981767274,88.7609488410416,96.3462599203017,88.5604272735094,83.4526664815623,84.4462680633829,79.8047545922004,78.7761999471508,79.0248842810377,68.1350552624013,73.3342214767654,93.7107593668423,69.1642155663935,66.786039050632,62.6123496049625,77.9332311165409,54.0138510747196,41.9681770935749,85.6189686910195,61.4531214578133,113.625269248893,169.193618464668,286.35677699122 | |||
|short_description=p1@Ampd1 | |||
}} |
Revision as of 18:16, 5 August 2015
Short description: | p1@Ampd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ampd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_ENSMUST00000090715, ENSMUST00000155034, NM_001033303, uc008qso.1, uc008qsp.1_5end |
EntrezGene: | 229665 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface structure | 5.99e-11 | 22 |
appendage | 1.93e-07 | 12 |
paired limb/fin | 1.93e-07 | 12 |
limb | 1.93e-07 | 12 |
paired limb/fin bud | 1.93e-07 | 12 |
limb bud | 1.93e-07 | 12 |
limb/fin field | 1.93e-07 | 12 |
limb field | 1.93e-07 | 12 |
hindlimb bud | 3.50e-07 | 5 |
stylopod | 3.50e-07 | 5 |
lower limb segment | 3.50e-07 | 5 |
multi-limb segment region | 3.50e-07 | 5 |
pelvic appendage | 3.50e-07 | 5 |
limb segment | 3.50e-07 | 5 |
paired limb/fin segment | 3.50e-07 | 5 |
pelvic appendage bud | 3.50e-07 | 5 |
subdivision of organism along appendicular axis | 3.50e-07 | 5 |
leg | 3.50e-07 | 5 |
hindlimb | 3.50e-07 | 5 |
hindlimb stylopod | 3.50e-07 | 5 |
posterior region of body | 3.50e-07 | 5 |
pelvic complex | 3.50e-07 | 5 |
hindlimb/pelvic fin field | 3.50e-07 | 5 |