FFCP PHASE1:Mm9::chr13:49718898..49718903,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2073 | |MCL_coexpression_id=2073 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:49718898..49718903,+ | |||
|description=CAGE_peak_at_chr13:49718898..49718903,+ | |description=CAGE_peak_at_chr13:49718898..49718903,+ | ||
|id=chr13:49718898..49718903,+ | |id=chr13:49718898..49718903,+ | ||
|ontology_enrichment_celltype=CL:0000680!4.45e-07!6;CL:0000183!4.45e-07!6;CL:0000187!4.45e-07!6;CL:0000056!4.45e-07!6 | |ontology_enrichment_celltype=CL:0000680!4.45e-07!6;CL:0000183!4.45e-07!6;CL:0000187!4.45e-07!6;CL:0000056!4.45e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.08e-25,3;CL:0000359,3.08e-25,3;CL:0002539,3.08e-25,3;CL:0000514,3.08e-25,3;CL:0000680,4.44e-22,6;CL:0000187,4.44e-22,6;CL:0000056,4.44e-22,6;CL:0000222,5.50e-19,7;CL:0000355,7.48e-15,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.08e-25,3;UBERON:0004237,3.08e-25,3;UBERON:0004695,3.08e-25,3;UBERON:0002111,3.08e-25,3;UBERON:0004178,3.08e-25,3;UBERON:0000947,4.10e-19,4;UBERON:0001637,4.10e-19,4;UBERON:0004573,4.10e-19,4;UBERON:0003509,4.10e-19,4;UBERON:0004571,4.10e-19,4;UBERON:0010191,4.10e-19,4;UBERON:0004572,4.10e-19,4;UBERON:0000055,1.99e-15,5;UBERON:0007500,1.99e-15,5;UBERON:0001981,1.99e-15,5;UBERON:0002049,1.99e-15,5;UBERON:0007798,1.99e-15,5;UBERON:0004537,1.99e-15,5;UBERON:0006965,1.99e-15,5;UBERON:0001134,7.48e-15,9;UBERON:0002036,7.48e-15,9;UBERON:0002385,7.48e-15,9;UBERON:0000486,7.48e-15,9;UBERON:0007503,7.48e-15,9;UBERON:0001015,7.48e-15,9;UBERON:0002329,7.48e-15,9;UBERON:0003082,7.48e-15,9;UBERON:0003059,7.48e-15,9;UBERON:0007282,7.48e-15,9;UBERON:0004290,7.48e-15,9;UBERON:0009618,7.48e-15,9;UBERON:0000383,2.11e-13,10;UBERON:0007524,3.25e-12,11;UBERON:0003077,3.25e-12,11;UBERON:0007285,3.25e-12,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,3.34543873024398,1.28482726513177,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,2.04516387093669,1.03914401841148,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.407357455401265,0,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0.527853372491847,0.219195732427575,0.834141747676794,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,1.63863314715738,1.72684981865896,1.01254341007058,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.822745103010605,0,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.648032044930808,0.418176592028937,0.436725127492355,1.21377911746339,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.429742108096597,0,0,0.927471342481686 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,3.34543873024398,1.28482726513177,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,1.54355661621568,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,2.04516387093669,1.03914401841148,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.255715457330331,0,0,0.407357455401265,0,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0.527853372491847,0.219195732427575,0.834141747676794,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0.32833492815819,0,0.146199987425332,0.658650345873152,0.268412837520744,0,0,0,0,0,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0.476087281772027,0,0.315270288212382,0.221464689648775,0,1.63863314715738,1.72684981865896,1.01254341007058,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0.356737635204141,0.822745103010605,0,0,0,0.441056796109924,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.648032044930808,0.418176592028937,0.436725127492355,1.21377911746339,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.128050304809739,0.287177344778066,0,0.115884325944855,0,0,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.436039249896986,0,0.25384382367503,0.365855945745545,0.263069711437843,0.407412341537585,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.429742108096597,0,0,0.927471342481686 | ||
|short_description=p@chr13:49718898..49718903,+ | |short_description=p@chr13:49718898..49718903,+ | ||
}} | }} |
Latest revision as of 02:12, 6 August 2015
Short description: | p@chr13:49718898..49718903, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49718898..49718903, + |
Coexpression cluster: | MCL_coexpression_mm9:2073 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.08e-25 | 3 |
vascular associated smooth muscle cell | 3.08e-25 | 3 |
aortic smooth muscle cell | 3.08e-25 | 3 |
smooth muscle myoblast | 3.08e-25 | 3 |
muscle precursor cell | 4.44e-22 | 6 |
muscle cell | 4.44e-22 | 6 |
myoblast | 4.44e-22 | 6 |
mesodermal cell | 5.50e-19 | 7 |
multi-potent skeletal muscle stem cell | 7.48e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.08e-25 | 3 |
blood vessel smooth muscle | 3.08e-25 | 3 |
arterial system smooth muscle | 3.08e-25 | 3 |
artery smooth muscle tissue | 3.08e-25 | 3 |
aorta smooth muscle tissue | 3.08e-25 | 3 |
aorta | 4.10e-19 | 4 |
artery | 4.10e-19 | 4 |
systemic artery | 4.10e-19 | 4 |
arterial blood vessel | 4.10e-19 | 4 |
systemic arterial system | 4.10e-19 | 4 |
aortic system | 4.10e-19 | 4 |
arterial system | 4.10e-19 | 4 |
vessel | 1.99e-15 | 5 |
epithelial tube open at both ends | 1.99e-15 | 5 |
blood vessel | 1.99e-15 | 5 |
vasculature | 1.99e-15 | 5 |
vascular system | 1.99e-15 | 5 |
blood vasculature | 1.99e-15 | 5 |
vascular cord | 1.99e-15 | 5 |
skeletal muscle tissue | 7.48e-15 | 9 |
striated muscle tissue | 7.48e-15 | 9 |
muscle tissue | 7.48e-15 | 9 |
multilaminar epithelium | 7.48e-15 | 9 |
epithelial vesicle | 7.48e-15 | 9 |
musculature | 7.48e-15 | 9 |
somite | 7.48e-15 | 9 |
myotome | 7.48e-15 | 9 |
presomitic mesoderm | 7.48e-15 | 9 |
presumptive segmental plate | 7.48e-15 | 9 |
dermomyotome | 7.48e-15 | 9 |
trunk paraxial mesoderm | 7.48e-15 | 9 |
musculature of body | 2.11e-13 | 10 |
dense mesenchyme tissue | 3.25e-12 | 11 |
paraxial mesoderm | 3.25e-12 | 11 |
presumptive paraxial mesoderm | 3.25e-12 | 11 |