FFCP PHASE1:Mm9::chr16:23050297..23050300,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=81|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:23050297..23050300,+|id=chr16:23050297..23050300,+|ontology_enrichment_celltype=CL:0000063!4.55e-17!66;CL:0000988!9.04e-14!32;CL:0002032!9.04e-14!32;CL:0000037!9.04e-14!32;CL:0000566!9.04e-14!32;CL:0000837!9.04e-14!32;CL:0002320!4.88e-13!46;CL:0000134!4.88e-13!46;CL:0002031!9.31e-13!25;CL:0000219!7.87e-12!54;CL:0000144!7.03e-10!121;CL:0000012!7.03e-10!121;CL:0000548!1.72e-09!115;CL:0000004!1.72e-09!115;CL:0000255!1.72e-09!115;CL:0002371!5.76e-09!118;CL:0000838!6.57e-09!12;CL:0000542!7.34e-09!13;CL:0000051!7.34e-09!13;CL:0000738!1.88e-08!17;CL:0002087!1.88e-08!17;CL:0000084!2.73e-08!11;CL:0000827!2.73e-08!11;CL:0000791!1.63e-07!9;CL:0000789!1.63e-07!9;CL:0002420!1.63e-07!9;CL:0002419!1.63e-07!9;CL:0000790!1.63e-07!9;CL:0000034!5.23e-07!97;CL:0000624!8.12e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-25,32;CL:0002032,1.21e-25,32;CL:0000037,1.21e-25,32;CL:0000837,1.21e-25,32;CL:0002320,1.76e-24,46;CL:0000134,1.76e-24,46;CL:0002031,1.42e-23,25;CL:0000219,5.38e-23,54;CL:0000838,5.29e-18,12;CL:0000791,1.08e-16,9;CL:0000789,1.08e-16,9;CL:0002420,1.08e-16,9;CL:0002419,1.08e-16,9;CL:0000790,1.08e-16,9;CL:0000084,1.92e-16,11;CL:0000827,1.92e-16,11;CL:0000542,2.20e-16,13;CL:0000051,2.20e-16,13;CL:0000738,3.03e-16,17;CL:0002087,3.03e-16,17;CL:0000624,6.27e-15,8;CL:0000034,1.27e-13,97;CL:0000723,5.21e-12,91;CL:0000048,5.21e-12,91;CL:0000893,1.01e-11,6;CL:0002489,1.01e-11,6;CL:0000898,1.01e-11,6;CL:0000809,1.01e-11,6;CL:0000810,1.01e-11,6;CL:0000895,1.01e-11,6;CL:0000808,1.01e-11,6;CL:0000894,1.01e-11,6;CL:0000806,1.01e-11,6;CL:0000807,1.01e-11,6;CL:0000805,1.01e-11,6;CL:0002425,1.01e-11,6;CL:0002436,1.01e-11,6;CL:0002427,1.01e-11,6;CL:0002428,1.01e-11,6;CL:0002429,1.01e-11,6;CL:0002433,1.01e-11,6;CL:0002431,1.01e-11,6;CL:0002432,1.01e-11,6;CL:0000049,4.52e-11,19;CL:0002076,3.40e-10,15;CL:0000223,1.25e-08,20;CL:0000553,3.99e-08,6;CL:0000556,3.99e-08,6;CL:0000839,5.30e-08,13;CL:0000763,8.94e-08,16;CL:0000050,1.96e-07,9;CL:0002563,3.03e-07,9;CL:0002251,3.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.88e-13!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.76e-24,46;UBERON:0000344,1.48e-10,15;UBERON:0001242,5.94e-08,13;UBERON:0001262,5.94e-08,13;UBERON:0004786,5.94e-08,13;UBERON:0003350,3.03e-07,9;UBERON:0004808,3.03e-07,9;UBERON:0001277,3.03e-07,9;UBERON:0002193,5.39e-07,48;UBERON:0002405,5.39e-07,48|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,1.17515490338323,7.00837921786577,7.618276083053,17.0354353803517,9.59664557920173,10.4442960617558,5.74359544766422,13.5248576645653,8.91688104673774,0.333109761815663,8.50396123037269,6.29605690315332,11.5143690355757,9.1866670515845,10.1853516431527,0.0850432901510698,0.595745707205312,8.61959304158487,6.23970448894286,6.8822784320151,0,0.86152399231815,0.861884930743556,6.84084310042946,1.76421090831952,0.886922042621219,0.635030673459631,0.61506478758457,15.8481681015439,1.44425809875637,3.15845826181135,1.83752420636132,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.699932108126813,0,6.87908684836719,7.97898356212479,10.7550015725588,0.514518872071894,1.14613375975503,0.515672092277442,0,0,0,1.35537812827653,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0.766763768145891,0,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,4.08921443999194,1.88928900266964,5.2175607966302,6.0229671388697,0,0,0,0,0,0.340860645156116,5.71529210126311,2.12003744706204,0.845060518660083,2.56652954828636,0,0,2.59789249213457,4.30711771307668,2.52762222507392,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.144599356919912,2.65383165584962,0.161766849947409,0,1.45462575940567,1.86391761218122,0,0,0.510914110417183,2.27648736561249,2.99951365496704,4.06624726633807,0,0,0.251308704225729,0,0,0,0,0.407357455401265,0.124406970610093,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,3.86021860672073,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0.946978942340841,0,0.154267112887378,0.697601834251224,0.536546802799238,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.268412837520744,0,0.205809224758569,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0,1.13800740571849,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,6.03165135757089,1.08781136763742,0,0,0,0.117211686592203,1.63934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,0.512612642393558,0.412773735926445,0.555583582109135,0.376736914009382,0.683471138605126,0,0.849892149969277,0.979660166265606,0.829199842826543,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0,0.117357238645754,0.2604087696879,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.513554785824136,0.129920822977795,0.358053391334963,0.79472541912506,0.360586348559907,0.590758108698309,0.201932899896295,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0,0.453460767230423,2.88581739386284,1.70456327558004,2.51826924546118,0,0.187682475451182,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.726511433089237,0,0.682934423016537,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p@chr16:23050297..23050300,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:23050297..23050300,+ | |||
|description=CAGE_peak_at_chr16:23050297..23050300,+ | |||
|id=chr16:23050297..23050300,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.55e-17!66;CL:0000988!9.04e-14!32;CL:0002032!9.04e-14!32;CL:0000037!9.04e-14!32;CL:0000566!9.04e-14!32;CL:0000837!9.04e-14!32;CL:0002320!4.88e-13!46;CL:0000134!4.88e-13!46;CL:0002031!9.31e-13!25;CL:0000219!7.87e-12!54;CL:0000144!7.03e-10!121;CL:0000012!7.03e-10!121;CL:0000548!1.72e-09!115;CL:0000004!1.72e-09!115;CL:0000255!1.72e-09!115;CL:0002371!5.76e-09!118;CL:0000838!6.57e-09!12;CL:0000542!7.34e-09!13;CL:0000051!7.34e-09!13;CL:0000738!1.88e-08!17;CL:0002087!1.88e-08!17;CL:0000084!2.73e-08!11;CL:0000827!2.73e-08!11;CL:0000791!1.63e-07!9;CL:0000789!1.63e-07!9;CL:0002420!1.63e-07!9;CL:0002419!1.63e-07!9;CL:0000790!1.63e-07!9;CL:0000034!5.23e-07!97;CL:0000624!8.12e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-25,32;CL:0002032,1.21e-25,32;CL:0000037,1.21e-25,32;CL:0000837,1.21e-25,32;CL:0002320,1.76e-24,46;CL:0000134,1.76e-24,46;CL:0002031,1.42e-23,25;CL:0000219,5.38e-23,54;CL:0000838,5.29e-18,12;CL:0000791,1.08e-16,9;CL:0000789,1.08e-16,9;CL:0002420,1.08e-16,9;CL:0002419,1.08e-16,9;CL:0000790,1.08e-16,9;CL:0000084,1.92e-16,11;CL:0000827,1.92e-16,11;CL:0000542,2.20e-16,13;CL:0000051,2.20e-16,13;CL:0000738,3.03e-16,17;CL:0002087,3.03e-16,17;CL:0000624,6.27e-15,8;CL:0000034,1.27e-13,97;CL:0000723,5.21e-12,91;CL:0000048,5.21e-12,91;CL:0000893,1.01e-11,6;CL:0002489,1.01e-11,6;CL:0000898,1.01e-11,6;CL:0000809,1.01e-11,6;CL:0000810,1.01e-11,6;CL:0000895,1.01e-11,6;CL:0000808,1.01e-11,6;CL:0000894,1.01e-11,6;CL:0000806,1.01e-11,6;CL:0000807,1.01e-11,6;CL:0000805,1.01e-11,6;CL:0002425,1.01e-11,6;CL:0002436,1.01e-11,6;CL:0002427,1.01e-11,6;CL:0002428,1.01e-11,6;CL:0002429,1.01e-11,6;CL:0002433,1.01e-11,6;CL:0002431,1.01e-11,6;CL:0002432,1.01e-11,6;CL:0000049,4.52e-11,19;CL:0002076,3.40e-10,15;CL:0000223,1.25e-08,20;CL:0000553,3.99e-08,6;CL:0000556,3.99e-08,6;CL:0000839,5.30e-08,13;CL:0000763,8.94e-08,16;CL:0000050,1.96e-07,9;CL:0002563,3.03e-07,9;CL:0002251,3.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.88e-13!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.76e-24,46;UBERON:0000344,1.48e-10,15;UBERON:0001242,5.94e-08,13;UBERON:0001262,5.94e-08,13;UBERON:0004786,5.94e-08,13;UBERON:0003350,3.03e-07,9;UBERON:0004808,3.03e-07,9;UBERON:0001277,3.03e-07,9;UBERON:0002193,5.39e-07,48;UBERON:0002405,5.39e-07,48 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,1.00179145989269,1.17515490338323,7.00837921786577,7.618276083053,17.0354353803517,9.59664557920173,10.4442960617558,5.74359544766422,13.5248576645653,8.91688104673774,0.333109761815663,8.50396123037269,6.29605690315332,11.5143690355757,9.1866670515845,10.1853516431527,0.0850432901510698,0.595745707205312,8.61959304158487,6.23970448894286,6.8822784320151,0,0.86152399231815,0.861884930743556,6.84084310042946,1.76421090831952,0.886922042621219,0.635030673459631,0.61506478758457,15.8481681015439,1.44425809875637,3.15845826181135,1.83752420636132,0,0,0.523523743973798,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.699932108126813,0,6.87908684836719,7.97898356212479,10.7550015725588,0.514518872071894,1.14613375975503,0.515672092277442,0,0,0,1.35537812827653,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0.766763768145891,0,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,4.08921443999194,1.88928900266964,5.2175607966302,6.0229671388697,0,0,0,0,0,0.340860645156116,5.71529210126311,2.12003744706204,0.845060518660083,2.56652954828636,0,0,2.59789249213457,4.30711771307668,2.52762222507392,0.22836775943812,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.144599356919912,2.65383165584962,0.161766849947409,0,1.45462575940567,1.86391761218122,0,0,0.510914110417183,2.27648736561249,2.99951365496704,4.06624726633807,0,0,0.251308704225729,0,0,0,0,0.407357455401265,0.124406970610093,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0,0,0,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,3.86021860672073,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0.946978942340841,0,0.154267112887378,0.697601834251224,0.536546802799238,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.268412837520744,0,0.205809224758569,0,0.264450566663544,0.426576501070468,0.464473343720877,0,0.403367049246685,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.432276099749388,0,1.13800740571849,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.126473074248515,0,0,0.246794327843601,0.296452627087149,0.166845105716094,0.393117990226406,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0.488894929326078,0.848725428875941,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,6.03165135757089,1.08781136763742,0,0,0,0.117211686592203,1.63934945376675,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0.477489376012546,0.164140899745061,0.291480836629851,0.18542530201051,0.512612642393558,0.412773735926445,0.555583582109135,0.376736914009382,0.683471138605126,0,0.849892149969277,0.979660166265606,0.829199842826543,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0.436725127492355,0.539457385539283,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0,0.117357238645754,0.2604087696879,0.209718688851422,0.483168241652012,0,0,0.405450430580328,0.513554785824136,0.129920822977795,0.358053391334963,0.79472541912506,0.360586348559907,0.590758108698309,0.201932899896295,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0,0.453460767230423,2.88581739386284,1.70456327558004,2.51826924546118,0,0.187682475451182,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0,0,0.726511433089237,0,0.682934423016537,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr16:23050297..23050300,+ | |||
}} |
Latest revision as of 05:20, 6 August 2015
Short description: | p@chr16:23050297..23050300, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:23050297..23050300, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.76e-24 | 46 |
mucosa | 1.48e-10 | 15 |
intestinal mucosa | 5.94e-08 | 13 |
wall of intestine | 5.94e-08 | 13 |
gastrointestinal system mucosa | 5.94e-08 | 13 |
epithelium of mucosa | 3.03e-07 | 9 |
gastrointestinal system epithelium | 3.03e-07 | 9 |
intestinal epithelium | 3.03e-07 | 9 |
hemolymphoid system | 5.39e-07 | 48 |
immune system | 5.39e-07 | 48 |