FFCP PHASE1:Mm9::chr2:101832102..101832110,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:101832102..101832110,+ | |||
|description=CAGE_peak_at_chr2:101832102..101832110,+ | |description=CAGE_peak_at_chr2:101832102..101832110,+ | ||
|id=chr2:101832102..101832110,+ | |id=chr2:101832102..101832110,+ | ||
|ontology_enrichment_celltype=CL:0002031!2.32e-10!25;CL:0000624!1.22e-09!8;CL:0000838!1.10e-08!12;CL:0000791!1.56e-08!9;CL:0000789!1.56e-08!9;CL:0002420!1.56e-08!9;CL:0002419!1.56e-08!9;CL:0000790!1.56e-08!9;CL:0000893!2.15e-08!6;CL:0002489!2.15e-08!6;CL:0000898!2.15e-08!6;CL:0000809!2.15e-08!6;CL:0000810!2.15e-08!6;CL:0000895!2.15e-08!6;CL:0000808!2.15e-08!6;CL:0000894!2.15e-08!6;CL:0000806!2.15e-08!6;CL:0000807!2.15e-08!6;CL:0000805!2.15e-08!6;CL:0002425!2.15e-08!6;CL:0002436!2.15e-08!6;CL:0002427!2.15e-08!6;CL:0002428!2.15e-08!6;CL:0002429!2.15e-08!6;CL:0002433!2.15e-08!6;CL:0002431!2.15e-08!6;CL:0002432!2.15e-08!6;CL:0000553!3.83e-08!6;CL:0000556!3.83e-08!6;CL:0000542!5.73e-08!13;CL:0000051!5.73e-08!13;CL:0000988!1.06e-07!32;CL:0002032!1.06e-07!32;CL:0000037!1.06e-07!32;CL:0000566!1.06e-07!32;CL:0000837!1.06e-07!32;CL:0000084!6.40e-07!11;CL:0000827!6.40e-07!11 | |ontology_enrichment_celltype=CL:0002031!2.32e-10!25;CL:0000624!1.22e-09!8;CL:0000838!1.10e-08!12;CL:0000791!1.56e-08!9;CL:0000789!1.56e-08!9;CL:0002420!1.56e-08!9;CL:0002419!1.56e-08!9;CL:0000790!1.56e-08!9;CL:0000893!2.15e-08!6;CL:0002489!2.15e-08!6;CL:0000898!2.15e-08!6;CL:0000809!2.15e-08!6;CL:0000810!2.15e-08!6;CL:0000895!2.15e-08!6;CL:0000808!2.15e-08!6;CL:0000894!2.15e-08!6;CL:0000806!2.15e-08!6;CL:0000807!2.15e-08!6;CL:0000805!2.15e-08!6;CL:0002425!2.15e-08!6;CL:0002436!2.15e-08!6;CL:0002427!2.15e-08!6;CL:0002428!2.15e-08!6;CL:0002429!2.15e-08!6;CL:0002433!2.15e-08!6;CL:0002431!2.15e-08!6;CL:0002432!2.15e-08!6;CL:0000553!3.83e-08!6;CL:0000556!3.83e-08!6;CL:0000542!5.73e-08!13;CL:0000051!5.73e-08!13;CL:0000988!1.06e-07!32;CL:0002032!1.06e-07!32;CL:0000037!1.06e-07!32;CL:0000566!1.06e-07!32;CL:0000837!1.06e-07!32;CL:0000084!6.40e-07!11;CL:0000827!6.40e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,9.51e-16,1;CL:0000792,9.51e-16,1;CL:0000624,2.44e-08,8;CL:0000791,1.63e-07,9;CL:0000789,1.63e-07,9;CL:0002420,1.63e-07,9;CL:0002419,1.63e-07,9;CL:0000790,1.63e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.46e-35!29;UBERON:0002193!1.51e-32!48;UBERON:0002370!4.39e-32!23;UBERON:0000974!4.39e-32!23;UBERON:0004807!4.39e-32!23;UBERON:0005058!4.39e-32!23;UBERON:0003351!4.39e-32!23;UBERON:0009113!4.39e-32!23;UBERON:0003295!4.39e-32!23;UBERON:0009722!4.39e-32!23;UBERON:0005562!4.39e-32!23;UBERON:0007690!4.39e-32!23;UBERON:0002390!6.93e-32!45;UBERON:0003061!6.93e-32!45;UBERON:0006562!1.33e-30!24;UBERON:0003408!1.33e-30!24;UBERON:0001557!1.33e-30!24;UBERON:0001042!1.33e-30!24;UBERON:0008814!1.33e-30!24;UBERON:0009145!1.33e-30!24;UBERON:0000072!8.06e-27!27;UBERON:0002405!8.17e-21!70;UBERON:0000063!6.72e-20!35;UBERON:0000065!1.09e-18!41;UBERON:0001004!3.71e-18!42;UBERON:0005057!4.10e-18!51;UBERON:0003081!1.45e-15!88;UBERON:0003929!2.07e-11!55;UBERON:0002368!3.57e-10!60;UBERON:0005911!1.26e-09!69;UBERON:0001041!2.51e-09!92;UBERON:0002530!3.94e-09!65;UBERON:0000490!6.10e-09!66;UBERON:0000077!1.25e-08!97;UBERON:0000064!2.00e-08!99;UBERON:0000949!6.47e-08!72 | |ontology_enrichment_uberon=UBERON:0004177!6.46e-35!29;UBERON:0002193!1.51e-32!48;UBERON:0002370!4.39e-32!23;UBERON:0000974!4.39e-32!23;UBERON:0004807!4.39e-32!23;UBERON:0005058!4.39e-32!23;UBERON:0003351!4.39e-32!23;UBERON:0009113!4.39e-32!23;UBERON:0003295!4.39e-32!23;UBERON:0009722!4.39e-32!23;UBERON:0005562!4.39e-32!23;UBERON:0007690!4.39e-32!23;UBERON:0002390!6.93e-32!45;UBERON:0003061!6.93e-32!45;UBERON:0006562!1.33e-30!24;UBERON:0003408!1.33e-30!24;UBERON:0001557!1.33e-30!24;UBERON:0001042!1.33e-30!24;UBERON:0008814!1.33e-30!24;UBERON:0009145!1.33e-30!24;UBERON:0000072!8.06e-27!27;UBERON:0002405!8.17e-21!70;UBERON:0000063!6.72e-20!35;UBERON:0000065!1.09e-18!41;UBERON:0001004!3.71e-18!42;UBERON:0005057!4.10e-18!51;UBERON:0003081!1.45e-15!88;UBERON:0003929!2.07e-11!55;UBERON:0002368!3.57e-10!60;UBERON:0005911!1.26e-09!69;UBERON:0001041!2.51e-09!92;UBERON:0002530!3.94e-09!65;UBERON:0000490!6.10e-09!66;UBERON:0000077!1.25e-08!97;UBERON:0000064!2.00e-08!99;UBERON:0000949!6.47e-08!72 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.92e-16,23;UBERON:0000974,2.92e-16,23;UBERON:0004807,2.92e-16,23;UBERON:0005058,2.92e-16,23;UBERON:0003351,2.92e-16,23;UBERON:0009113,2.92e-16,23;UBERON:0003295,2.92e-16,23;UBERON:0009722,2.92e-16,23;UBERON:0005562,2.92e-16,23;UBERON:0007690,2.92e-16,23;UBERON:0006562,1.32e-15,24;UBERON:0003408,1.32e-15,24;UBERON:0001557,1.32e-15,24;UBERON:0001042,1.32e-15,24;UBERON:0008814,1.32e-15,24;UBERON:0009145,1.32e-15,24;UBERON:0000072,6.30e-14,27;UBERON:0004177,5.32e-13,29;UBERON:0005057,5.32e-13,29;UBERON:0000077,7.54e-11,35;UBERON:0007811,1.47e-10,36;UBERON:0000065,2.54e-09,41;UBERON:0001004,4.15e-09,42;UBERON:0000153,6.62e-09,43;UBERON:0002390,1.59e-08,45;UBERON:0003061,1.59e-08,45;UBERON:0002193,5.14e-08,48;UBERON:0002405,5.14e-08,48;UBERON:0003929,4.89e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0.70219357896598,0,0.0797721589953364,0.513602189793617,3.14713448708391,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.389762468933385,1.61124026100733,1.39076948346885,1.08175904567972,1.9199638532695,0.706765149637033,0.914481679859998,0.201652370273681,0.779663045918019,0.865906574762965,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0,0.70219357896598,0,0.0797721589953364,0.513602189793617,3.14713448708391,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0.389762468933385,1.61124026100733,1.39076948346885,1.08175904567972,1.9199638532695,0.706765149637033,0.914481679859998,0.201652370273681,0.779663045918019,0.865906574762965,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:101832102..101832110,+ | |short_description=p@chr2:101832102..101832110,+ | ||
}} | }} |
Latest revision as of 06:52, 6 August 2015
Short description: | p@chr2:101832102..101832110, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:101832102..101832110, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 9.51e-16 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.51e-16 | 1 |
CD4-positive, alpha-beta T cell | 2.44e-08 | 8 |
mature alpha-beta T cell | 1.63e-07 | 9 |
alpha-beta T cell | 1.63e-07 | 9 |
immature T cell | 1.63e-07 | 9 |
mature T cell | 1.63e-07 | 9 |
immature alpha-beta T cell | 1.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.92e-16 | 23 |
neck | 2.92e-16 | 23 |
respiratory system epithelium | 2.92e-16 | 23 |
hemolymphoid system gland | 2.92e-16 | 23 |
pharyngeal epithelium | 2.92e-16 | 23 |
thymic region | 2.92e-16 | 23 |
pharyngeal gland | 2.92e-16 | 23 |
entire pharyngeal arch endoderm | 2.92e-16 | 23 |
thymus primordium | 2.92e-16 | 23 |
early pharyngeal endoderm | 2.92e-16 | 23 |
pharynx | 1.32e-15 | 24 |
gland of gut | 1.32e-15 | 24 |
upper respiratory tract | 1.32e-15 | 24 |
chordate pharynx | 1.32e-15 | 24 |
pharyngeal arch system | 1.32e-15 | 24 |
pharyngeal region of foregut | 1.32e-15 | 24 |
segment of respiratory tract | 6.30e-14 | 27 |
hemopoietic organ | 5.32e-13 | 29 |
immune organ | 5.32e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 7.54e-11 | 35 |
craniocervical region | 1.47e-10 | 36 |
respiratory tract | 2.54e-09 | 41 |
respiratory system | 4.15e-09 | 42 |
anterior region of body | 6.62e-09 | 43 |
hematopoietic system | 1.59e-08 | 45 |
blood island | 1.59e-08 | 45 |
hemolymphoid system | 5.14e-08 | 48 |
immune system | 5.14e-08 | 48 |
gut epithelium | 4.89e-07 | 55 |