FFCP PHASE1:Mm9::chr3:34095699..34095712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENSMUST00000172560_5end | |association_with_transcript=26bp_to_ENSMUST00000172560_5end | ||
|cluster_id=chr3:34095699..34095712,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000172560_5end | |description=CAGE_peak_2_at_ENSMUST00000172560_5end | ||
|id=chr3:34095699..34095712,+ | |id=chr3:34095699..34095712,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.71e-18!33;CL:0000047!9.71e-18!33;CL:0000031!9.71e-18!33;CL:0000404!9.71e-18!33;CL:0000393!9.11e-14!39;CL:0000211!9.11e-14!39;CL:0000107!4.11e-13!9;CL:0002319!9.24e-12!43;CL:0000221!2.55e-11!44;CL:0000133!2.55e-11!44;CL:0000055!4.53e-09!50;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | |ontology_enrichment_celltype=CL:0000540!9.71e-18!33;CL:0000047!9.71e-18!33;CL:0000031!9.71e-18!33;CL:0000404!9.71e-18!33;CL:0000393!9.11e-14!39;CL:0000211!9.11e-14!39;CL:0000107!4.11e-13!9;CL:0002319!9.24e-12!43;CL:0000221!2.55e-11!44;CL:0000133!2.55e-11!44;CL:0000055!4.53e-09!50;CL:0000117!1.17e-08!23;CL:0000337!1.17e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.53e-48,9;CL:0000540,1.55e-25,33;CL:0000047,1.55e-25,33;CL:0000031,1.55e-25,33;CL:0000404,1.55e-25,33;CL:0000393,2.43e-21,39;CL:0000211,2.43e-21,39;CL:0002319,3.42e-19,43;CL:0000221,1.03e-18,44;CL:0000133,1.03e-18,44;CL:0002608,5.04e-16,3;CL:0002321,4.42e-11,70;CL:0002609,2.76e-08,6;CL:0000723,4.43e-08,91;CL:0000048,4.43e-08,91;CL:0000034,1.85e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.87e-14!73;UBERON:0005743!2.87e-14!73;UBERON:0000073!1.39e-13!75;UBERON:0001016!1.39e-13!75;UBERON:0002410!4.11e-13!9;UBERON:0004121!2.76e-10!102;UBERON:0000924!2.76e-10!102;UBERON:0006601!2.76e-10!102;UBERON:0000010!3.29e-10!11;UBERON:0003056!5.41e-08!49;UBERON:0002346!6.65e-08!71;UBERON:0003075!6.65e-08!71;UBERON:0007284!6.65e-08!71;UBERON:0002616!6.79e-08!49;UBERON:0002780!7.83e-08!39;UBERON:0001890!7.83e-08!39;UBERON:0006240!7.83e-08!39;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0003080!1.70e-07!40;UBERON:0000033!3.30e-07!63 | |ontology_enrichment_uberon=UBERON:0001017!2.87e-14!73;UBERON:0005743!2.87e-14!73;UBERON:0000073!1.39e-13!75;UBERON:0001016!1.39e-13!75;UBERON:0002410!4.11e-13!9;UBERON:0004121!2.76e-10!102;UBERON:0000924!2.76e-10!102;UBERON:0006601!2.76e-10!102;UBERON:0000010!3.29e-10!11;UBERON:0003056!5.41e-08!49;UBERON:0002346!6.65e-08!71;UBERON:0003075!6.65e-08!71;UBERON:0007284!6.65e-08!71;UBERON:0002616!6.79e-08!49;UBERON:0002780!7.83e-08!39;UBERON:0001890!7.83e-08!39;UBERON:0006240!7.83e-08!39;UBERON:0000955!1.32e-07!50;UBERON:0006238!1.32e-07!50;UBERON:0003080!1.70e-07!40;UBERON:0000033!3.30e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.53e-48,9;UBERON:0000010,6.24e-39,11;UBERON:0000011,1.90e-17,3;UBERON:0010313,5.76e-17,3;UBERON:0002342,5.76e-17,3;UBERON:0002005,5.76e-17,3;UBERON:0005428,5.76e-17,3;UBERON:0005062,5.76e-17,3;UBERON:0000013,1.72e-16,3;UBERON:0001017,2.33e-12,73;UBERON:0001016,5.61e-12,75;UBERON:0004121,4.99e-09,95;UBERON:0000924,4.99e-09,95;UBERON:0006601,4.99e-09,95;UBERON:0001954,3.60e-07,7;UBERON:0003022,3.60e-07,7;UBERON:0002421,3.60e-07,7;UBERON:0000349,3.60e-07,7;UBERON:0002600,3.60e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,1.71487118900936,4.60058260887535,2.75765635983006,0,0.383062014255563,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,1.38219787324151,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0.213288250535234,1.16118335930219,0.644337306610467,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,5.36363973007636,5.85658116444958,6.46270193198397,11.4705023017225,13.3679204449436,13.587673477864,4.85772842009873,5.26060544240361,5.13874111330481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0.399024873401031,0,1.45864030240976,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0,0.271608227691724,1.12228454331548,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,1.71487118900936,4.60058260887535,2.75765635983006,0,0.383062014255563,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,1.38219787324151,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0.213288250535234,1.16118335930219,0.644337306610467,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,5.36363973007636,5.85658116444958,6.46270193198397,11.4705023017225,13.3679204449436,13.587673477864,4.85772842009873,5.26060544240361,5.13874111330481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.324016022465404,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0.399024873401031,0,1.45864030240976,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0,0.412085900803307,0.441596760403192,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0,0.271608227691724,1.12228454331548,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p2@ENSMUST00000172560 | |short_description=p2@ENSMUST00000172560 | ||
}} | }} |
Latest revision as of 09:44, 6 August 2015
Short description: | p2@ENSMUST00000172560 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000172560_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 26bp_to_ENSMUST00000172560_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.53e-48 | 9 |
neuron | 1.55e-25 | 33 |
neuronal stem cell | 1.55e-25 | 33 |
neuroblast | 1.55e-25 | 33 |
electrically signaling cell | 1.55e-25 | 33 |
electrically responsive cell | 2.43e-21 | 39 |
electrically active cell | 2.43e-21 | 39 |
neural cell | 3.42e-19 | 43 |
ectodermal cell | 1.03e-18 | 44 |
neurectodermal cell | 1.03e-18 | 44 |
hippocampal neuron | 5.04e-16 | 3 |
embryonic cell | 4.42e-11 | 70 |
neuron of cerebral cortex | 2.76e-08 | 6 |
somatic stem cell | 4.43e-08 | 91 |
multi fate stem cell | 4.43e-08 | 91 |
stem cell | 1.85e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.53e-48 | 9 |
peripheral nervous system | 6.24e-39 | 11 |
parasympathetic nervous system | 1.90e-17 | 3 |
neural crest-derived structure | 5.76e-17 | 3 |
neural crest | 5.76e-17 | 3 |
enteric nervous system | 5.76e-17 | 3 |
vagal neural crest | 5.76e-17 | 3 |
neural fold | 5.76e-17 | 3 |
sympathetic nervous system | 1.72e-16 | 3 |
central nervous system | 2.33e-12 | 73 |
nervous system | 5.61e-12 | 75 |
ectoderm-derived structure | 4.99e-09 | 95 |
ectoderm | 4.99e-09 | 95 |
presumptive ectoderm | 4.99e-09 | 95 |
Ammon's horn | 3.60e-07 | 7 |
lobe parts of cerebral cortex | 3.60e-07 | 7 |
hippocampal formation | 3.60e-07 | 7 |
limbic system | 3.60e-07 | 7 |
limbic lobe | 3.60e-07 | 7 |