FFCP PHASE1:Hg19::chr1:109241994..109242012,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:109241994..109242012,+ to FFCP PHASE1:Hg19::chr1:109241994..109242012,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55119 | |EntrezGene=55119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=25512 | |HGNC=25512 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTL8 | |UniProt=Q5VTL8 | ||
|association_with_transcript=-191bp_to_AY211915_5end | |||
|cluster_id=chr1:109241994..109242012,+ | |||
|coexpression_cluster_id=C1037 | |||
|description=CAGE_peak_4_at_PRPF38B_5end | |||
|id=chr1:109241994..109242012,+ | |||
|ontology_enrichment_celltype=CL:0002032!6.41e-17!165;CL:0000837!6.41e-17!165;CL:0000037!1.46e-16!172;CL:0000566!1.46e-16!172;CL:0002087!1.42e-15!119;CL:0000988!1.74e-14!182;CL:0002031!9.59e-13!124;CL:0000738!8.23e-12!140;CL:0000860!1.62e-11!45;CL:0002057!2.32e-10!42;CL:0000763!2.70e-10!112;CL:0000049!2.70e-10!112;CL:0002194!1.01e-08!63;CL:0000576!1.01e-08!63;CL:0000040!1.01e-08!63;CL:0000559!1.01e-08!63;CL:0002009!3.39e-08!65;CL:0000839!1.73e-07!70;CL:0000542!5.12e-07!53;CL:0000051!5.12e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.53e-09;33!CL:0002057;3.53e-09;33!CL:0000473;1.14e-07;39!CL:0000234;1.14e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.12e-15,161;CL:0000837,1.12e-15,161;CL:0000037,2.68e-15,168;CL:0002087,3.28e-14,115;CL:0000988,1.61e-13,177;CL:0002031,2.21e-11,120;CL:0000738,1.42e-10,136;CL:0000860,1.46e-10,42;CL:0002057,1.46e-10,42;CL:0000473,4.81e-10,48;CL:0000234,4.81e-10,48;CL:0000763,2.64e-09,108;CL:0000049,2.64e-09,108;CL:0002194,1.44e-07,59;CL:0000576,1.44e-07,59;CL:0000040,1.44e-07,59;CL:0000559,1.44e-07,59;CL:0002009,3.60e-07,61;CL:0000542,6.60e-07,53;CL:0000051,6.60e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-08;42 | |||
|ontology_enrichment_disease=DOID:162!2.67e-20!235;DOID:14566!2.56e-19!239;DOID:2531!1.27e-10!51;DOID:0060083!1.27e-10!51;DOID:0050686!9.38e-10!137;DOID:1240!1.42e-09!39;DOID:0050687!1.51e-09!143;DOID:305!4.79e-07!106;DOID:8692!8.00e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.35e-08;39!DOID:2531;6.68e-07;51!DOID:0060083;6.68e-07;51!DOID:8692;9.60e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.57e-20,235;DOID:14566,4.63e-19,239;DOID:2531,7.89e-11,51;DOID:0060083,7.89e-11,51;DOID:1240,9.31e-10,39;DOID:0050686,1.73e-09,137;DOID:0050687,2.63e-09,143;DOID:305,4.83e-07,106;DOID:8692,6.05e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@PRPF38B | |||
}} | }} |
Latest revision as of 19:59, 15 September 2015
Short description: | p4@PRPF38B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRPF38B_5end |
Coexpression cluster: | C1037_acute_medulloblastoma_Monocytederived_CD4_diffuse_testicular_small |
Association with transcript: | -191bp_to_AY211915_5end |
EntrezGene: | PRPF38B |
HGNC: | 25512 |
UniProt: | Q5VTL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.12e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-15 | 161 |
hematopoietic stem cell | 2.68e-15 | 168 |
nongranular leukocyte | 3.28e-14 | 115 |
hematopoietic cell | 1.61e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 2.21e-11 | 120 |
leukocyte | 1.42e-10 | 136 |
classical monocyte | 1.46e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-10 | 42 |
defensive cell | 4.81e-10 | 48 |
phagocyte | 4.81e-10 | 48 |
myeloid cell | 2.64e-09 | 108 |
common myeloid progenitor | 2.64e-09 | 108 |
monopoietic cell | 1.44e-07 | 59 |
monocyte | 1.44e-07 | 59 |
monoblast | 1.44e-07 | 59 |
promonocyte | 1.44e-07 | 59 |
macrophage dendritic cell progenitor | 3.60e-07 | 61 |
lymphocyte | 6.60e-07 | 53 |
common lymphoid progenitor | 6.60e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.57e-20 | 235 |
disease of cellular proliferation | 4.63e-19 | 239 |
hematologic cancer | 7.89e-11 | 51 |
immune system cancer | 7.89e-11 | 51 |
leukemia | 9.31e-10 | 39 |
organ system cancer | 1.73e-09 | 137 |
cell type cancer | 2.63e-09 | 143 |
carcinoma | 4.83e-07 | 106 |
myeloid leukemia | 6.05e-07 | 31 |