FFCP PHASE1:Hg19::chr10:102268544..102268555,-: Difference between revisions
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|id=chr10:102268544..102268555,-
|short_description=p5@SEC31B
|description=CAGE_peak_5_at_SEC31B_5end
|association_with_transcript=0bp_to_ENST00000484848,uc001krg.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25956 | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |HGNC=23197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484848,uc001krg.1_5end | |||
|cluster_id=chr10:102268544..102268555,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_5_at_SEC31B_5end | |||
|id=chr10:102268544..102268555,- | |||
|ontology_enrichment_celltype=CL:0000084!1.17e-12!25;CL:0000827!1.17e-12!25;CL:0002127!4.33e-07!1;CL:0000914!4.33e-07!1;CL:0000911!4.33e-07!1;CL:0000814!4.33e-07!1;CL:0002042!4.33e-07!1;CL:0002039!4.33e-07!1;CL:0002040!4.33e-07!1;CL:0002041!4.33e-07!1;CL:0000838!7.56e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002127;5.98e-16;1!CL:0000911;5.98e-16;1!CL:0000814;5.98e-16;1!CL:0000084;2.00e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.44e-16,1;CL:0000914,6.44e-16,1;CL:0000911,6.44e-16,1;CL:0000814,6.44e-16,1;CL:0002042,6.44e-16,1;CL:0002039,6.44e-16,1;CL:0002040,6.44e-16,1;CL:0002041,6.44e-16,1;CL:0000084,1.98e-09,25;CL:0000827,1.98e-09,25;CL:0000893,1.29e-08,2;CL:0002489,1.29e-08,2;CL:0000809,1.29e-08,2;CL:0000808,1.29e-08,2;CL:0000894,1.29e-08,2;CL:0000806,1.29e-08,2;CL:0000807,1.29e-08,2;CL:0000805,1.29e-08,2;CL:0002425,1.29e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.25e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.44e-09!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.31e-07,51;DOID:0060083,5.31e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.61e-13!4;UBERON:0005058!4.61e-13!4;UBERON:0009113!4.61e-13!4;UBERON:0003295!4.61e-13!4;UBERON:0005562!4.61e-13!4;UBERON:0004177!1.38e-12!7;UBERON:0000974!6.57e-09!10;UBERON:0003351!7.36e-09!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.77e-08;2!UBERON:0005058;2.77e-08;2!UBERON:0009113;2.77e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.42e-15,4;UBERON:0005058,3.42e-15,4;UBERON:0009113,3.42e-15,4;UBERON:0003295,3.42e-15,4;UBERON:0005562,3.42e-15,4;UBERON:0003351,1.90e-10,6;UBERON:0004177,4.39e-09,7;UBERON:0005057,4.39e-09,7 | |||
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|short_description=p5@SEC31B | |||
}} | }} |
Latest revision as of 21:45, 15 September 2015
Short description: | p5@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEC31B_5end |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | 0bp_to_ENST00000484848, uc001krg.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.44e-16 | 1 |
immature NK T cell | 6.44e-16 | 1 |
effector T cell | 6.44e-16 | 1 |
mature NK T cell | 6.44e-16 | 1 |
immature NK T cell stage IV | 6.44e-16 | 1 |
immature NK T cell stage I | 6.44e-16 | 1 |
immature NK T cell stage II | 6.44e-16 | 1 |
immature NK T cell stage III | 6.44e-16 | 1 |
T cell | 1.98e-09 | 25 |
pro-T cell | 1.98e-09 | 25 |
thymocyte | 1.29e-08 | 2 |
double negative thymocyte | 1.29e-08 | 2 |
double-positive, alpha-beta thymocyte | 1.29e-08 | 2 |
DN4 thymocyte | 1.29e-08 | 2 |
DN1 thymic pro-T cell | 1.29e-08 | 2 |
DN2 thymocyte | 1.29e-08 | 2 |
DN3 thymocyte | 1.29e-08 | 2 |
immature single positive thymocyte | 1.29e-08 | 2 |
early T lineage precursor | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.42e-15 | 4 |
hemolymphoid system gland | 3.42e-15 | 4 |
thymic region | 3.42e-15 | 4 |
pharyngeal gland | 3.42e-15 | 4 |
thymus primordium | 3.42e-15 | 4 |
pharyngeal epithelium | 1.90e-10 | 6 |
hemopoietic organ | 4.39e-09 | 7 |
immune organ | 4.39e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.31e-07 | 51 |
immune system cancer | 5.31e-07 | 51 |