FFCP PHASE1:Hg19::chr10:102268574..102268583,-: Difference between revisions
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|id=chr10:102268574..102268583,-
|short_description=p12@SEC31B
|description=CAGE_peak_12_at_SEC31B_5end
|association_with_transcript=-24bp_to_ENST00000484848,uc001k...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25956 | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |HGNC=23197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000484848,uc001krg.1_5end | |||
|cluster_id=chr10:102268574..102268583,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_12_at_SEC31B_5end | |||
|id=chr10:102268574..102268583,- | |||
|ontology_enrichment_celltype=CL:0000080!2.28e-12!6;CL:0002127!7.98e-10!1;CL:0000914!7.98e-10!1;CL:0000911!7.98e-10!1;CL:0000814!7.98e-10!1;CL:0002042!7.98e-10!1;CL:0002039!7.98e-10!1;CL:0002040!7.98e-10!1;CL:0002041!7.98e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.61e-34;2 | |||
|ontology_enrichment_disease=DOID:3371!4.87e-09!1;DOID:4549!4.87e-09!1;DOID:5861!4.87e-09!1;DOID:6496!4.87e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.44e-18!4;UBERON:0005058!1.44e-18!4;UBERON:0009113!1.44e-18!4;UBERON:0003295!1.44e-18!4;UBERON:0005562!1.44e-18!4;UBERON:0003351!1.42e-12!6;UBERON:0004177!7.45e-11!7;UBERON:0003112!2.55e-09!1;UBERON:0000032!2.55e-09!1;UBERON:0005253!2.55e-09!1;UBERON:0003128!2.55e-09!1;UBERON:0002241!2.55e-09!1;UBERON:0001703!2.55e-09!1;UBERON:0004761!2.55e-09!1;UBERON:0009617!2.55e-09!1;UBERON:0000974!9.60e-08!10;UBERON:0003408!9.60e-08!10;UBERON:0001042!9.60e-08!10;UBERON:0009145!9.60e-08!10;UBERON:0006562!4.42e-07!11;UBERON:0009722!4.42e-07!11;UBERON:0007690!4.42e-07!11 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p12@SEC31B | |||
}} | }} |
Latest revision as of 21:47, 15 September 2015
Short description: | p12@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SEC31B_5end |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | -24bp_to_ENST00000484848, uc001krg.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |