FFCP PHASE1:Hg19::chrX:49460578..49460597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8712 | |EntrezGene=8712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4107 | |HGNC=4107 | ||
|TSSclassifier=strong | |||
|UniProt=O75459 | |UniProt=O75459 | ||
|association_with_transcript=0bp_to_ENST00000376150,NM_003785,uc004dom.2_5end | |association_with_transcript=0bp_to_ENST00000376150,NM_003785,uc004dom.2_5end | ||
|cluster_id=chrX:49460578..49460597,- | |||
|coexpression_cluster_id=C154 | |||
|description=CAGE_peak_1_at_PAGE1_5end | |description=CAGE_peak_1_at_PAGE1_5end | ||
|id=chrX:49460578..49460597,- | |id=chrX:49460578..49460597,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;8.49e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.27e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.77e-25;29 | |||
|ontology_enrichment_disease=DOID:162!5.24e-19!235;DOID:14566!1.92e-18!239;DOID:0050687!2.15e-13!143;DOID:305!6.07e-12!106;DOID:1036!1.33e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.08e-16;8!DOID:0060085;8.49e-09;1!DOID:3165;8.49e-09;1!DOID:0060121;8.49e-09;1!DOID:2438;8.49e-09;1!DOID:3030;8.49e-09;1!DOID:4418;8.49e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.49e-16,8;DOID:162,5.37e-12,235;DOID:14566,1.15e-11,239;DOID:0050687,2.45e-09,143;DOID:3030,7.27e-09,1;DOID:0060085,9.17e-09,1;DOID:3165,9.17e-09,1;DOID:0060121,9.17e-09,1;DOID:2438,9.17e-09,1;DOID:4418,9.17e-09,1;DOID:305,2.20e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.30e-40!9;UBERON:0001557!3.09e-18!19;UBERON:0008947!3.21e-10!38;UBERON:0003258!3.21e-10!38;UBERON:0000072!4.15e-08!46;UBERON:0000065!8.61e-07!53 | |ontology_enrichment_uberon=UBERON:0001737!2.30e-40!9;UBERON:0001557!3.09e-18!19;UBERON:0008947!3.21e-10!38;UBERON:0003258!3.21e-10!38;UBERON:0000072!4.15e-08!46;UBERON:0000065!8.61e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.79e-68;9!UBERON:0001557;2.79e-68;9!UBERON:0000072;3.23e-18;37!UBERON:0000065;3.35e-14;44!UBERON:0007195;3.58e-09;1!UBERON:0001004;1.18e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.80e-68,9;UBERON:0001557,1.05e-31,19;UBERON:0008947,1.11e-18,38;UBERON:0003258,1.11e-18,38;UBERON:0000072,8.46e-15,47;UBERON:0000065,1.13e-12,54;UBERON:0007195,3.31e-09,1;UBERON:0001004,8.20e-09,74;UBERON:0001041,2.95e-07,87 | |||
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| ||
|short_description=p1@PAGE1 | |short_description=p1@PAGE1 | ||
}} | }} |
Latest revision as of 22:03, 15 September 2015
Short description: | p1@PAGE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAGE1_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | 0bp_to_ENST00000376150, NM_003785, uc004dom.2_5end |
EntrezGene: | PAGE1 |
HGNC: | 4107 |
UniProt: | O75459 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.80e-68 | 9 |
upper respiratory tract | 1.05e-31 | 19 |
respiratory primordium | 1.11e-18 | 38 |
endoderm of foregut | 1.11e-18 | 38 |
segment of respiratory tract | 8.46e-15 | 47 |
respiratory tract | 1.13e-12 | 54 |
stroma of bone marrow | 3.31e-09 | 1 |
respiratory system | 8.20e-09 | 74 |
foregut | 2.95e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.49e-16 | 8 |
cancer | 5.37e-12 | 235 |
disease of cellular proliferation | 1.15e-11 | 239 |
cell type cancer | 2.45e-09 | 143 |
mucinous adenocarcinoma | 7.27e-09 | 1 |
organ system benign neoplasm | 9.17e-09 | 1 |
skin benign neoplasm | 9.17e-09 | 1 |
integumentary system benign neoplasm | 9.17e-09 | 1 |
dermis tumor | 9.17e-09 | 1 |
cutaneous fibrous histiocytoma | 9.17e-09 | 1 |
carcinoma | 2.20e-08 | 106 |