FFCP PHASE1:Hg19::chr1:110155692..110155710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2780 | |EntrezGene=2780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4394 | |HGNC=4394 | ||
|TSSclassifier=strong | |||
|UniProt=P19087,Q5T697 | |UniProt=P19087,Q5T697 | ||
|association_with_transcript=0bp_to_NM_005272,uc001dya.2_5end | |association_with_transcript=0bp_to_NM_005272,uc001dya.2_5end | ||
|cluster_id=chr1:110155692..110155710,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_GNAT2_5end | |description=CAGE_peak_1_at_GNAT2_5end | ||
|id=chr1:110155692..110155710,- | |id=chr1:110155692..110155710,- | ||
|ontology_enrichment_celltype=CL:0000306!1.92e-07!4;CL:0002222!1.92e-07!4;CL:0002224!1.92e-07!4 | |ontology_enrichment_celltype=CL:0000306!1.92e-07!4;CL:0002222!1.92e-07!4;CL:0002224!1.92e-07!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.89e-53;3 | |||
|ontology_enrichment_disease=DOID:5409!1.80e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.46e-50!2;UBERON:0002757!1.46e-50!2;UBERON:0010134!1.46e-50!2;UBERON:0002784!1.46e-50!2;UBERON:0005408!1.46e-50!2;UBERON:0001899!1.46e-50!2;UBERON:0003296!6.73e-26!4;UBERON:0010133!6.73e-26!4;UBERON:0000966!8.13e-21!5;UBERON:0005388!8.13e-21!5;UBERON:0001802!8.13e-21!5;UBERON:0000970!2.95e-20!20;UBERON:0002104!2.56e-19!21;UBERON:0000020!1.10e-17!23;UBERON:0001032!5.68e-17!24;UBERON:0004456!5.68e-17!24;UBERON:0001894!2.85e-15!7;UBERON:0006222!2.85e-15!7;UBERON:0002360!1.55e-13!2;UBERON:0000094!1.55e-13!2;UBERON:0007645!1.55e-13!2;UBERON:0000019!2.07e-12!19;UBERON:0000047!2.07e-12!19;UBERON:0004088!2.07e-12!19;UBERON:0003072!2.07e-12!19;UBERON:0003071!2.07e-12!19;UBERON:0004128!2.07e-12!19;UBERON:0001456!2.70e-11!21;UBERON:0003075!2.36e-10!86;UBERON:0007284!2.36e-10!86;UBERON:0003056!2.89e-10!61;UBERON:0002346!6.68e-10!90;UBERON:0005085!2.33e-08!29;UBERON:0010077!1.92e-07!4;UBERON:0005389!1.92e-07!4;UBERON:0000484!1.92e-07!4;UBERON:0002546!1.92e-07!4;UBERON:0000965!1.92e-07!4;UBERON:0001803!1.92e-07!4;UBERON:0003073!1.92e-07!4;UBERON:0005426!1.92e-07!4;UBERON:0005743!2.81e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0000966;2.34e-32;5!UBERON:0005388;2.34e-32;5!UBERON:0001802;2.34e-32;5!UBERON:0001894;1.28e-23;7!UBERON:0000970;1.42e-18;20!UBERON:0002104;9.85e-18;21!UBERON:0000020;2.85e-16;23!UBERON:0001032;1.25e-15;24!UBERON:0004456;1.25e-15;24!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0001456;1.53e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.34e-79,2;UBERON:0002757,2.34e-79,2;UBERON:0010134,2.34e-79,2;UBERON:0005408,2.34e-79,2;UBERON:0001899,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0002784,2.22e-40,4;UBERON:0000966,3.55e-27,6;UBERON:0005388,3.55e-27,6;UBERON:0001802,3.55e-27,6;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0000970,9.85e-18,21;UBERON:0002104,9.85e-18,21;UBERON:0000020,1.25e-15,24;UBERON:0001032,1.25e-15,24;UBERON:0004456,1.25e-15,24;UBERON:0003056,6.84e-11,61;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0001456,3.39e-08,22;UBERON:0002346,6.09e-08,86 | |||
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|short_description=p1@GNAT2 | |short_description=p1@GNAT2 | ||
}} | }} |
Latest revision as of 22:19, 15 September 2015
Short description: | p1@GNAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNAT2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_NM_005272, uc001dya.2_5end |
EntrezGene: | GNAT2 |
HGNC: | 4394 |
UniProt: | P19087Q5T697 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
retina | 3.55e-27 | 6 |
photoreceptor array | 3.55e-27 | 6 |
posterior segment of eyeball | 3.55e-27 | 6 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
eye | 9.85e-18 | 21 |
visual system | 9.85e-18 | 21 |
sense organ | 1.25e-15 | 24 |
sensory system | 1.25e-15 | 24 |
entire sense organ system | 1.25e-15 | 24 |
pre-chordal neural plate | 6.84e-11 | 61 |
camera-type eye | 6.42e-09 | 20 |
simple eye | 6.42e-09 | 20 |
immature eye | 6.42e-09 | 20 |
ocular region | 6.42e-09 | 20 |
eyeball of camera-type eye | 6.42e-09 | 20 |
optic cup | 6.42e-09 | 20 |
optic vesicle | 6.42e-09 | 20 |
eye primordium | 6.42e-09 | 20 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
face | 3.39e-08 | 22 |
neurectoderm | 6.09e-08 | 86 |