FFCP PHASE1:Hg19::chr12:93772402..93772430,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:93772402..93772430,+
|short_description=p3@NUDT4
|description=CAGE_peak_3_at_NUDT4_5end
|association_with_transcript=0bp_to_ENST00000546925_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11163 | |EntrezGene=11163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8051 | |HGNC=8051 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRR0 | |UniProt=F8VRR0 | ||
|association_with_transcript=0bp_to_ENST00000546925_5end | |||
|cluster_id=chr12:93772402..93772430,+ | |||
|description=CAGE_peak_3_at_NUDT4_5end | |||
|id=chr12:93772402..93772430,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.89e-18!24;CL:0000071!2.12e-14!18;CL:0002546!2.12e-14!18;CL:0000213!4.76e-11!57;CL:0000215!4.76e-11!57;CL:0000115!5.10e-11!35;CL:0000222!1.26e-09!119;CL:1000413!4.80e-08!9;CL:0002078!3.11e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.30e-57;24!CL:0000071;8.79e-44;18!CL:0000115;3.72e-32;36!CL:1000413;8.67e-23;9!CL:0002078;8.39e-20;45!CL:0000213;5.93e-18;58!CL:0000215;5.93e-18;58!CL:0002544;6.33e-16;6!CL:0002543;1.70e-15;6!CL:0002138;7.81e-15;6!CL:0002144;9.74e-09;3!CL:0002618;1.33e-08;3!CL:0000076;1.58e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.28e-57,24;CL:0000071,8.81e-44,18;CL:0002546,8.81e-44,18;CL:0000115,1.28e-38,36;CL:0002078,2.54e-29,45;CL:0000213,5.90e-29,58;CL:0000215,5.90e-29,58;CL:1000413,8.06e-23,9;CL:0000222,1.87e-16,121;CL:0002544,6.44e-16,6;CL:0002543,1.81e-15,6;CL:0005020,7.75e-15,6;CL:0002138,7.75e-15,6;CL:0005022,7.75e-15,6;CL:0000076,1.12e-13,63;CL:0002144,9.82e-09,3;CL:0002618,1.32e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;8.79e-44;18!CL:0005022;7.81e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.12e-14!18;UBERON:0004638!2.12e-14!18;UBERON:0004852!2.12e-14!18;UBERON:0000055!3.77e-14!69;UBERON:0002049!9.57e-14!79;UBERON:0007798!9.57e-14!79;UBERON:0004535!6.47e-13!110;UBERON:0001009!1.13e-12!113;UBERON:0000487!1.70e-12!22;UBERON:0006914!1.10e-11!25;UBERON:0004872!4.57e-11!84;UBERON:0000477!1.01e-10!286;UBERON:0001981!1.13e-10!60;UBERON:0007500!1.13e-10!60;UBERON:0004537!1.13e-10!60;UBERON:0006965!1.13e-10!60;UBERON:0004111!5.38e-10!241;UBERON:0003915!4.80e-08!9;UBERON:0004700!4.80e-08!9;UBERON:0001917!4.80e-08!9;UBERON:0000025!2.89e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.79e-44;18!UBERON:0001986;8.79e-44;18!UBERON:0004852;8.79e-44;18!UBERON:0000487;1.50e-38;22!UBERON:0006914;3.29e-33;25!UBERON:0000490;1.13e-26;33!UBERON:0003915;8.67e-23;9!UBERON:0004700;8.67e-23;9!UBERON:0001917;8.67e-23;9!UBERON:0000055;2.02e-17;65!UBERON:0001473;2.21e-14;8!UBERON:0004536;2.21e-14;8!UBERON:0006558;2.21e-14;8!UBERON:0007500;2.87e-14;56!UBERON:0001981;2.87e-14;56!UBERON:0004537;2.87e-14;56!UBERON:0002049;7.26e-12;75!UBERON:0007798;7.26e-12;75!UBERON:0002465;2.94e-11;10!UBERON:0001638;5.09e-10;9!UBERON:0003920;5.09e-10;9!UBERON:0004582;5.09e-10;9!UBERON:0001637;2.24e-09;42!UBERON:0003509;2.24e-09;42!UBERON:0004572;2.24e-09;42!UBERON:0010523;9.74e-09;3!UBERON:0001915;9.74e-09;3!UBERON:0001982;9.74e-09;3!UBERON:0004535;3.28e-08;109!UBERON:0000947;4.24e-08;21!UBERON:0010191;4.24e-08;21!UBERON:0003914;4.45e-08;74!UBERON:0001009;1.59e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.81e-44,18;UBERON:0001986,8.81e-44,18;UBERON:0004852,8.81e-44,18;UBERON:0000487,1.09e-38,22;UBERON:0006914,2.48e-33,25;UBERON:0000055,5.19e-33,68;UBERON:0002049,1.81e-27,78;UBERON:0007798,1.81e-27,78;UBERON:0007500,2.26e-23,59;UBERON:0001981,2.26e-23,59;UBERON:0004537,2.26e-23,59;UBERON:0006965,2.26e-23,59;UBERON:0003915,8.06e-23,9;UBERON:0004700,8.06e-23,9;UBERON:0001917,8.06e-23,9;UBERON:0004535,2.83e-22,109;UBERON:0004872,1.34e-21,83;UBERON:0001009,2.19e-21,112;UBERON:0003914,7.68e-16,117;UBERON:0001473,1.93e-14,8;UBERON:0004536,1.93e-14,8;UBERON:0006558,1.93e-14,8;UBERON:0004111,2.36e-12,240;UBERON:0002465,2.64e-11,10;UBERON:0001637,7.41e-11,42;UBERON:0003509,7.41e-11,42;UBERON:0004572,7.41e-11,42;UBERON:0000025,1.63e-10,192;UBERON:0001638,5.30e-10,9;UBERON:0003920,5.30e-10,9;UBERON:0004582,5.30e-10,9;UBERON:0000490,6.30e-09,148;UBERON:0010523,9.82e-09,3;UBERON:0001915,9.82e-09,3;UBERON:0001982,9.82e-09,3;UBERON:0000947,4.29e-08,21;UBERON:0010191,4.29e-08,21;UBERON:0003081,1.09e-07,203 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0.218441372130172,0,0.990130823680373,0,2.01697543935533,0,0.730310090387373,1.46379839637152,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,5.28685314316103,0,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0.68725489096526,0.506039384039006,0.318565414324097,0,0.950452044448374,0.451725357233318,0,0,0,0,0,0,0,0,4.02420515822182,0.895037932904712,0,0,0.144846518960824,1.5905718941022,0.973269740605272,0.378139268656271,0.443458794925128,0.43917392846563,0.654895377488563,0,0,0,0,0,0,0,0,7.7517338873015,5.16140757063675,10.4142150482278,10.7408508965562,7.55098985177831,3.85165258716094,5.8518590630307,1.29208379584664,2.49036383880697,6.35969164252873,10.4735622448378,3.80136052859256,8.7862340717341,10.6622293300302,4.0507097394088,7.0546785344423,5.61323431565425,4.72968218029953,6.13266549863533,3.79706263827252,6.04565754970344,0,0,0,1.98788780678127,0.25326102332916,0,0.860509862246441,0.354668382198357,0.560677600142307,0,0,1.24484414159907,2.2900814251847,3.10577615915572,0,0,0.468642863667593,0.312160076830321,0.570471821544449,0,0.352303495931295,0.161872944368132,0.421352420106746,0.408308342509787,0.368502951935304,0.619954687054593,1.18800285728205,0,0.910161361938026,1.43723628363248,0.505008341862199,0.875829639103749,0.277064115484183,1.31693286264251,0.612975591598039,0,2.1552114800404,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.80823028409406,0,0.302256294682921,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0,0.134831308160164,0,0.38474715694639,0,0,2.057870056657,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,2.88662684050547,0.231860809950154,0.70445216541493,5.77465791044295,5.09284063834272,6.65889532821094,0,0,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.358234090811393,0,0,13.7945706610864,2.64145302039678,0.829312462163088,1.44119953416961,0.88369703398466,0.190493682876507,0,0,0,0.514137463516618,0.300343057843917,0.571652865261156,0.672786506072164,0,0.36669142910475,1.03417372606222,0,0,0.26593811658487,0,0.257207374262142,0,0,1.00084595560703,0.542621605391443,0,0,0.355391948742546,0.791951872933429,1.20575750823834,2.61460037580088,0.99972991182057,0,0.502257091432126,0,0.718874566474748,0,0,0.289562613335158,0.410952645100767,0.537182889719687,0,0.197030760201927,0.215627574859517,0.128343036279748,2.03275699377971,0,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,0,0,0.24538298343828,2.00068208423871,0.271265023699736,0.415941723061614,0,0.473107245101804,0.234282829985426,0,0,1.03473071292505,0,0.553107505625109,0.521301686808497,0,0,0,0,0.213455115606889,0,0,0,0,0,1.12264037773229,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.328508624055237,1.03850885836724,0,0,0.200506470303285,0,0,0,0.524497659837696,0,0.231046011313244,0,0,0.105551628892876,0,0.680374821106063,1.51141141271498,0,0.270946437543853,0,0,0,0,0.657779629937804,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.870036464629098,0.154048617114644,0.15350367472613,0.137836572484531,0.966782203814463,0.290033387828457,0.170453254832202,0.356128142586949,0.495854746082934,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,1.23213432070436,0.532306030317022,0,0.55597265731176,0.715624433709956,0.372158369359667,0,0.38126038784765,0,0,0,0.78494864019923,0,0.54907405947211,0.589062011728432,0.808729926293264,0,0,0,0.974853958525138,1.05650146756755,0.272999822815972,0.565621727814851,0,0,0,1.31535265576129,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0.286822704408103,0.392996164052485,1.07001315444375,0.709522128141196,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0,0,0.213648142254946,0,0,0.371606350251437,0.577076851905779,0.0711418433484141,0.478278818186467,0.59873811429845,0,0.211673582723883,0.649243880549111,0.561594356226918,0,0.313359791546046,2.50634477090067,0.169291777801603,0.160588075103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| ||
|short_description=p3@NUDT4 | |||
}} | }} |
Latest revision as of 23:52, 15 September 2015
Short description: | p3@NUDT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NUDT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546925_5end |
EntrezGene: | NUDT4 |
HGNC: | 8051 |
UniProt: | F8VRR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.28e-57 | 24 |
blood vessel endothelial cell | 8.81e-44 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.81e-44 | 18 |
endothelial cell | 1.28e-38 | 36 |
meso-epithelial cell | 2.54e-29 | 45 |
lining cell | 5.90e-29 | 58 |
barrier cell | 5.90e-29 | 58 |
endothelial cell of artery | 8.06e-23 | 9 |
mesodermal cell | 1.87e-16 | 121 |
aortic endothelial cell | 6.44e-16 | 6 |
vein endothelial cell | 1.81e-15 | 6 |
lymphangioblast | 7.75e-15 | 6 |
endothelial cell of lymphatic vessel | 7.75e-15 | 6 |
vascular lymphangioblast | 7.75e-15 | 6 |
squamous epithelial cell | 1.12e-13 | 63 |
capillary endothelial cell | 9.82e-09 | 3 |
endothelial cell of umbilical vein | 1.32e-08 | 3 |