FFCP PHASE1:Hg19::chr12:104850810..104850821,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=50515 | |EntrezGene=50515 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=17422 | |HGNC=17422 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F8VRG6 | |UniProt=F8VRG6 | ||
|association_with_transcript=31bp_to_ENST00000546689_5end | |association_with_transcript=31bp_to_ENST00000546689_5end | ||
|cluster_id=chr12:104850810..104850821,+ | |||
|description=CAGE_peak_6_at_CHST11_5end | |description=CAGE_peak_6_at_CHST11_5end | ||
|id=chr12:104850810..104850821,+ | |id=chr12:104850810..104850821,+ | ||
Latest revision as of 00:26, 16 September 2015
| Short description: | p6@CHST11 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_CHST11_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 31bp_to_ENST00000546689_5end |
| EntrezGene: | CHST11 |
| HGNC: | 17422 |
| UniProt: | F8VRG6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@CHST11 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 8.85e-41 | 108 |
| common myeloid progenitor | 8.85e-41 | 108 |
| myeloid leukocyte | 5.78e-32 | 72 |
| hematopoietic oligopotent progenitor cell | 6.61e-29 | 161 |
| hematopoietic multipotent progenitor cell | 6.61e-29 | 161 |
| hematopoietic stem cell | 7.65e-29 | 168 |
| myeloid lineage restricted progenitor cell | 5.09e-27 | 66 |
| granulocyte monocyte progenitor cell | 6.50e-27 | 67 |
| hematopoietic cell | 3.51e-26 | 177 |
| monopoietic cell | 7.49e-24 | 59 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.62e-23 | 76 |
| hematopoietic system | 1.49e-22 | 98 |
| blood island | 1.49e-22 | 98 |
| bone element | 3.59e-22 | 82 |
| skeletal element | 4.68e-20 | 90 |
| hemolymphoid system | 5.05e-19 | 108 |
| immune system | 8.29e-18 | 93 |
| skeletal system | 1.18e-16 | 100 |
| lateral plate mesoderm | 3.08e-08 | 203 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 4.91e-10 | 31 |
| leukemia | 6.45e-10 | 39 |
| hematologic cancer | 1.13e-08 | 51 |
| immune system cancer | 1.13e-08 | 51 |
Showing 1 to 4 of 4 entries
