FFCP PHASE1:Hg19::chr20:35890211..35890222,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2691 | |EntrezGene=2691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4265 | |HGNC=4265 | ||
|TSSclassifier=strong | |||
|UniProt=P01286 | |UniProt=P01286 | ||
|association_with_transcript=15bp_to_ENST00000373614,uc002xgs.2,uc002xgt.2_5end | |association_with_transcript=15bp_to_ENST00000373614,uc002xgs.2,uc002xgt.2_5end | ||
|cluster_id=chr20:35890211..35890222,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_1_at_GHRH_5end | |description=CAGE_peak_1_at_GHRH_5end | ||
|id=chr20:35890211..35890222,- | |id=chr20:35890211..35890222,- | ||
|ontology_enrichment_celltype=CL:0002322!3.14e-07!5 | |ontology_enrichment_celltype=CL:0002322!3.14e-07!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!7.46e-11!32;UBERON:0002791!1.64e-10!33;UBERON:0002020!3.43e-10!34;UBERON:0003528!3.43e-10!34;UBERON:0001893!3.43e-10!34;UBERON:0002135!1.84e-09!1;UBERON:0007023!2.05e-09!115;UBERON:0002370!2.26e-09!4;UBERON:0005058!2.26e-09!4;UBERON:0009113!2.26e-09!4;UBERON:0003295!2.26e-09!4;UBERON:0005562!2.26e-09!4;UBERON:0002902!2.35e-09!1;UBERON:0009899!2.35e-09!1;UBERON:0003112!3.00e-09!1;UBERON:0000032!3.00e-09!1;UBERON:0005253!3.00e-09!1;UBERON:0003128!3.00e-09!1;UBERON:0002241!3.00e-09!1;UBERON:0001703!3.00e-09!1;UBERON:0004761!3.00e-09!1;UBERON:0009617!3.00e-09!1;UBERON:0001950!3.19e-09!20;UBERON:0001874!3.25e-09!1;UBERON:0002022!4.87e-09!1;UBERON:0002581!5.28e-09!1;UBERON:0001882!5.72e-09!1;UBERON:0005403!5.72e-09!1;UBERON:0000369!1.08e-08!4;UBERON:0002435!1.08e-08!4;UBERON:0000204!1.08e-08!4;UBERON:0010082!1.08e-08!4;UBERON:0002619!2.09e-08!22;UBERON:0002780!2.29e-08!41;UBERON:0001890!2.29e-08!41;UBERON:0006240!2.29e-08!41;UBERON:0003080!3.74e-08!42;UBERON:0000974!5.08e-08!10;UBERON:0000956!2.05e-07!25;UBERON:0000203!2.05e-07!25;UBERON:0002021!2.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.38e-99;2!UBERON:0005058;9.38e-99;2!UBERON:0009113;9.38e-99;2!UBERON:0004177;2.22e-40;5!UBERON:0005057;2.22e-40;5!UBERON:0002108;3.26e-11;4!UBERON:0000077;2.06e-08;27!UBERON:0002405;2.06e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-50,4;UBERON:0005058,4.00e-50,4;UBERON:0009113,4.00e-50,4;UBERON:0003295,4.00e-50,4;UBERON:0005562,4.00e-50,4;UBERON:0003351,7.07e-34,6;UBERON:0004177,3.16e-29,7;UBERON:0005057,3.16e-29,7;UBERON:0000974,7.73e-21,10;UBERON:0003408,7.73e-21,10;UBERON:0001042,7.73e-21,10;UBERON:0009145,7.73e-21,10;UBERON:0006562,4.69e-19,11;UBERON:0009722,4.69e-19,11;UBERON:0007690,4.69e-19,11;UBERON:0008814,4.31e-12,18;UBERON:0001557,1.63e-11,19;UBERON:0002108,2.94e-11,4;UBERON:0004807,3.78e-08,28;UBERON:0000077,6.67e-08,29 | |||
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|short_description=p1@GHRH | |short_description=p1@GHRH | ||
}} | }} |
Latest revision as of 00:54, 16 September 2015
Short description: | p1@GHRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GHRH_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 15bp_to_ENST00000373614, uc002xgs.2, uc002xgt.2_5end |
EntrezGene: | GHRH |
HGNC: | 4265 |
UniProt: | P01286 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.00e-50 | 4 |
hemolymphoid system gland | 4.00e-50 | 4 |
thymic region | 4.00e-50 | 4 |
pharyngeal gland | 4.00e-50 | 4 |
thymus primordium | 4.00e-50 | 4 |
pharyngeal epithelium | 7.07e-34 | 6 |
hemopoietic organ | 3.16e-29 | 7 |
immune organ | 3.16e-29 | 7 |
neck | 7.73e-21 | 10 |
gland of gut | 7.73e-21 | 10 |
chordate pharynx | 7.73e-21 | 10 |
pharyngeal region of foregut | 7.73e-21 | 10 |
pharynx | 4.69e-19 | 11 |
entire pharyngeal arch endoderm | 4.69e-19 | 11 |
early pharyngeal endoderm | 4.69e-19 | 11 |
pharyngeal arch system | 4.31e-12 | 18 |
upper respiratory tract | 1.63e-11 | 19 |
small intestine | 2.94e-11 | 4 |
respiratory system epithelium | 3.78e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.67e-08 | 29 |