FFCP PHASE1:Hg19::chr10:104243962..104243975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10121 | |EntrezGene=10121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=167 | |HGNC=167 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=155bp_to_ENST00000494549_5end | |association_with_transcript=155bp_to_ENST00000494549_5end | ||
|cluster_id=chr10:104243962..104243975,- | |||
|description=CAGE_peak_3_at_ACTR1A_5end | |description=CAGE_peak_3_at_ACTR1A_5end | ||
|id=chr10:104243962..104243975,- | |id=chr10:104243962..104243975,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.17e-09,61;CL:0000211,3.17e-09,61;CL:0000680,7.79e-08,58;CL:0000056,7.79e-08,58;CL:0000355,7.79e-08,58;CL:0002321,2.17e-07,250;CL:0000222,4.11e-07,121;CL:0000346,5.56e-07,3;CL:1000428,5.56e-07,3;CL:0000187,9.86e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.00e-07;3!DOID:127;2.00e-07;3 | |ontology_enrichment_disease_v019=DOID:0060084;2.00e-07;3!DOID:127;2.00e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.77e-07,3;DOID:127,1.77e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000486!7.85e-07!82 | |ontology_enrichment_uberon=UBERON:0000486!7.85e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.42e-10,78;UBERON:0001637,3.21e-08,42;UBERON:0003509,3.21e-08,42;UBERON:0004572,3.21e-08,42;UBERON:0002329,4.38e-08,71;UBERON:0003059,4.38e-08,71;UBERON:0007282,4.38e-08,71;UBERON:0004290,4.38e-08,71;UBERON:0009618,4.38e-08,71;UBERON:0003077,6.83e-08,72;UBERON:0007285,6.83e-08,72;UBERON:0007524,1.05e-07,73;UBERON:0000926,1.09e-07,315;UBERON:0004120,1.09e-07,315;UBERON:0006603,1.09e-07,315;UBERON:0000486,1.15e-07,83;UBERON:0007500,4.28e-07,59;UBERON:0001981,4.28e-07,59;UBERON:0004537,4.28e-07,59;UBERON:0006965,4.28e-07,59;UBERON:0000055,4.51e-07,68;UBERON:0001134,5.16e-07,62;UBERON:0002036,5.16e-07,62;UBERON:0003082,5.16e-07,62;UBERON:0000412,5.56e-07,3;UBERON:0001992,5.56e-07,3;UBERON:0002049,7.35e-07,78;UBERON:0007798,7.35e-07,78 | |||
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|phase1_expression=0,1.2846031433459,0.704772020479856,1.0007329835313,1.34088328328186,1.74467704820074,0,0,1.30592814099919,0,0,0,0,0.618831764800233,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,0.975865597581014,0.123121058076788,2.04000691244253,0.940364164434263,0.572471974262113,2.18999080116615,0.627713197974014,0.534893840235659,0.492603536699674,0.393553906568396,0,0.383829398097213,0,0.919421224478927,0.6024118375565,2.21852406100073,0,0,0,0,0.802177789880567,0,0.223915474239924,0,0,0.290796477559129,0,0,0.697287110717054,0,0.619412741790207,1.43846196161075,0.768482119587302,0.709446689665756,0.344745680736619,0,1.35426486594342,0.188242339542605,0.545812300115692,0.674170453335254,1.22433556948361,0,0.639337125799041,1.31940520074686,0.199463657621632,0.852449501065388,0.580418477257168,0,0,0,0,0.434377689410233,1.21079900526674,0,0,0.845021145247767,0.637812899895131,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0.39783335439818,0.182664153764634,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0.786021525498329,0,0.334372990781356,0,0,0,0.334231370655521,0,0.443067789167242,0,0.25618263945135,0.650296737799391,0.164437904603676,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,2.01210257911091,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.886917589850256,0.263504357079378,0.392937226493138,0.364295288292542,0.741568885568859,0,0.174129737299267,1.06366368415092,0,0,0.74291500265913,0.596287222100115,0.860234595106124,0,0,0.838998872419812,1.6507082516404,2.08994966536811,1.29208379584664,0.35576626268671,0,0.402829317109147,0,1.70843440283719,0.735326160691737,1.62028389576352,0.535798369704479,0,0.450445921933289,0,0,1.09921046358244,0,0,0,0,0.886413581652058,0,1.43418310374407,1.41867352879343,1.12135520028461,0,0.98667019366864,0,0.942974704487816,1.79808093424805,0,1.15235184896,0,0.312160076830321,0.570471821544449,0.298897361103602,0.704606991862589,0.647491777472526,0.561803226808994,0.204154171254893,0.491337269247072,0.206651562351531,0,0.494533858557114,0,1.43723628363248,0.336672227908132,0.500474079487857,0,0,0.919463387397059,0.150238058906597,0.794025282120147,0.358779271377724,0,0,0,0.206105058476878,1.03056216018252,0.18611685633159,0.168776332241266,0.68205903612839,0.252433774244115,0.0920498986422993,0.80823028409406,0.355009592516614,0.201504196455281,0.508681776931463,0.57978255948989,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.464775771478074,0.207322110030741,0.252320850875628,0,1.56449532329816,2.57296375277154,2.76269842704961,0.464367928031979,0.721879481669586,0.709840800239063,1.01150814046861,0.241011029883482,0.661763836394364,0,0.237270619111097,0.674156540800822,0.392442930250692,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0.514703430895577,0.219500570817251,0,0.603173834469785,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0,0.721832238805369,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0.297262324577456,0,0.16798212819886,0.425325291727159,0,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0,0.12624243342638,0.190493682876507,0,1.17217447210047,1.71072446022705,1.02827492703324,0.901029173531752,0.285826432630578,0.224262168690721,0,0.5867062865676,0.258543431515556,0,1.690605505112,0.797814349754612,0,0.771622122786426,2.83698264046557,0.266422179016099,0.142977993658148,0.542621605391443,0,0.325736184293735,1.06617584622764,0.791951872933429,0.301439377059586,1.74306691720059,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,1.01346914667305,1.43833425785268,0.358121926479791,0.112085143993527,0,0,0.128343036279748,0,0,2.31986643833309,1.17261385734044,0.637938751653163,0.749007023947182,0,0,0.12269149171914,1.50051156317903,1.62759014219841,0.831883446123229,2.14114786556594,1.26161932027148,0.585707074963566,0.300946099727719,0,0,0,0.737476674166813,0.60818530127658,0,1.02943027143257,0,0.215714200818617,0.213455115606889,0,0,0.907170879989041,0.248107807818777,0.153461973288062,1.40330047216537,0.384417447767103,0.511707249066704,0.64341568457443,4.45254199334973,0.925258162815933,0.532685175939381,0.164254312027618,0.519254429183621,2.20799719073923,0.362578348774867,1.80455823272956,0.184161977871793,0.68888668898764,1.27463817604702,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.633309773357254,1.13733384070897,1.70093705276516,1.51141141271498,0,0,1.00337954770971,0,0.831076008928724,0.895499018888713,0.657779629937804,0.522870902049801,0,0.656029291399411,0,0,0.640986253728404,0.165018999841176,0,0,0,0.096670718292122,1.23238893691716,1.07452572308291,1.37836572484531,0.107420244868274,0.870100163485371,0.426133137080504,0.267096106940212,0.991709492165869,0.57657020209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| ||
|short_description=p3@ACTR1A | |short_description=p3@ACTR1A | ||
}} | }} |
Latest revision as of 01:31, 16 September 2015
Short description: | p3@ACTR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACTR1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 155bp_to_ENST00000494549_5end |
EntrezGene: | ACTR1A |
HGNC: | 167 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.17e-09 | 61 |
electrically active cell | 3.17e-09 | 61 |
muscle precursor cell | 7.79e-08 | 58 |
myoblast | 7.79e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-08 | 58 |
embryonic cell | 2.17e-07 | 250 |
mesodermal cell | 4.11e-07 | 121 |
hair follicle dermal papilla cell | 5.56e-07 | 3 |
stem cell of epidermis | 5.56e-07 | 3 |
muscle cell | 9.86e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.42e-10 | 78 |
artery | 3.21e-08 | 42 |
arterial blood vessel | 3.21e-08 | 42 |
arterial system | 3.21e-08 | 42 |
somite | 4.38e-08 | 71 |
presomitic mesoderm | 4.38e-08 | 71 |
presumptive segmental plate | 4.38e-08 | 71 |
dermomyotome | 4.38e-08 | 71 |
trunk paraxial mesoderm | 4.38e-08 | 71 |
paraxial mesoderm | 6.83e-08 | 72 |
presumptive paraxial mesoderm | 6.83e-08 | 72 |
dense mesenchyme tissue | 1.05e-07 | 73 |
mesoderm | 1.09e-07 | 315 |
mesoderm-derived structure | 1.09e-07 | 315 |
presumptive mesoderm | 1.09e-07 | 315 |
multilaminar epithelium | 1.15e-07 | 83 |
epithelial tube open at both ends | 4.28e-07 | 59 |
blood vessel | 4.28e-07 | 59 |
blood vasculature | 4.28e-07 | 59 |
vascular cord | 4.28e-07 | 59 |
vessel | 4.51e-07 | 68 |
skeletal muscle tissue | 5.16e-07 | 62 |
striated muscle tissue | 5.16e-07 | 62 |
myotome | 5.16e-07 | 62 |
dermal papilla | 5.56e-07 | 3 |
papillary layer of dermis | 5.56e-07 | 3 |
vasculature | 7.35e-07 | 78 |
vascular system | 7.35e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.77e-07 | 3 |
leiomyoma | 1.77e-07 | 3 |