FFCP PHASE1:Hg19::chr2:238249113..238249142,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1293 | |EntrezGene=1293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2213 | |HGNC=2213 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=102bp_to_ENST00000468792_5end | |association_with_transcript=102bp_to_ENST00000468792_5end | ||
|cluster_id=chr2:238249113..238249142,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_11_at_COL6A3_5end | |description=CAGE_peak_11_at_COL6A3_5end | ||
|id=chr2:238249113..238249142,- | |id=chr2:238249113..238249142,- | ||
|ontology_enrichment_celltype=CL:0000055!3.70e-31!180;CL:0000057!1.67e-29!75;CL:0002620!1.27e-13!23;CL:0000048!1.99e-13!430;CL:0000723!1.29e-12!436;CL:0000034!6.78e-12!444;CL:0000183!5.33e-10!59;CL:0002320!1.08e-09!365;CL:0000680!1.15e-09!57;CL:0000056!1.15e-09!57;CL:0000355!1.15e-09!57;CL:0000187!2.94e-09!54;CL:0002570!2.27e-08!8;CL:0000499!1.45e-07!27;CL:0000134!2.14e-07!358;CL:0002371!2.16e-07!591;CL:0000393!2.41e-07!60;CL:0000211!2.41e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.70e-31!180;CL:0000057!1.67e-29!75;CL:0002620!1.27e-13!23;CL:0000048!1.99e-13!430;CL:0000723!1.29e-12!436;CL:0000034!6.78e-12!444;CL:0000183!5.33e-10!59;CL:0002320!1.08e-09!365;CL:0000680!1.15e-09!57;CL:0000056!1.15e-09!57;CL:0000355!1.15e-09!57;CL:0000187!2.94e-09!54;CL:0002570!2.27e-08!8;CL:0000499!1.45e-07!27;CL:0000134!2.14e-07!358;CL:0002371!2.16e-07!591;CL:0000393!2.41e-07!60;CL:0000211!2.41e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002570;8.06e-13;8!CL:0000499;6.82e-12;28!CL:0000723;5.28e-11;61!CL:0000048;3.43e-09;58!CL:0000134;4.95e-09;55!CL:0000327;3.85e-08;15!CL:0000034;3.89e-08;69!CL:0002320;8.16e-08;188!CL:0000153;1.15e-07;9!CL:0000447;1.15e-07;9!CL:0002620;1.23e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.10e-16,76;CL:0000048,1.65e-14,427;CL:0000723,6.17e-14,433;CL:0002320,1.52e-13,361;CL:0000034,3.35e-13,441;CL:0002570,8.56e-13,8;CL:0000499,4.09e-12,28;CL:0000134,5.58e-10,354;CL:0000327,2.29e-08,15;CL:0000153,1.05e-07,9;CL:0000447,1.05e-07,9;CL:0002620,1.33e-07,23;CL:0000219,2.25e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.70e-17!83;UBERON:0002329!5.70e-17!83;UBERON:0003077!5.70e-17!83;UBERON:0003059!5.70e-17!83;UBERON:0007282!5.70e-17!83;UBERON:0009618!5.70e-17!83;UBERON:0007285!5.70e-17!83;UBERON:0002199!7.58e-14!45;UBERON:0002416!7.58e-14!45;UBERON:0004290!8.77e-14!70;UBERON:0003102!1.15e-12!95;UBERON:0000486!3.37e-11!82;UBERON:0005256!3.38e-11!143;UBERON:0002097!4.55e-11!40;UBERON:0002384!1.01e-10!375;UBERON:0002385!1.41e-10!63;UBERON:0001015!1.41e-10!63;UBERON:0000383!1.41e-10!63;UBERON:0001134!1.60e-10!61;UBERON:0002036!1.60e-10!61;UBERON:0003082!1.60e-10!61;UBERON:0001013!6.76e-08!14;UBERON:0002100!4.12e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!5.70e-17!83;UBERON:0002329!5.70e-17!83;UBERON:0003077!5.70e-17!83;UBERON:0003059!5.70e-17!83;UBERON:0007282!5.70e-17!83;UBERON:0009618!5.70e-17!83;UBERON:0007285!5.70e-17!83;UBERON:0002199!7.58e-14!45;UBERON:0002416!7.58e-14!45;UBERON:0004290!8.77e-14!70;UBERON:0003102!1.15e-12!95;UBERON:0000486!3.37e-11!82;UBERON:0005256!3.38e-11!143;UBERON:0002097!4.55e-11!40;UBERON:0002384!1.01e-10!375;UBERON:0002385!1.41e-10!63;UBERON:0001015!1.41e-10!63;UBERON:0000383!1.41e-10!63;UBERON:0001134!1.60e-10!61;UBERON:0002036!1.60e-10!61;UBERON:0003082!1.60e-10!61;UBERON:0001013!6.76e-08!14;UBERON:0002100!4.12e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.22e-09;8!UBERON:0000982;1.22e-09;8!UBERON:0004770;1.22e-09;8!UBERON:0011135;8.22e-09;5!UBERON:0002216;8.22e-09;5!UBERON:0011134;8.22e-09;5!UBERON:0002209;8.22e-09;5!UBERON:0002213;8.22e-09;5!UBERON:0007844;8.22e-09;5!UBERON:0011138;8.22e-09;5!UBERON:0001130;8.22e-09;5!UBERON:0001066;8.22e-09;5!UBERON:0001468;8.22e-09;5!UBERON:0002384;1.13e-08;198!UBERON:0001013;2.41e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.99e-14,371;UBERON:0004905,1.24e-09,8;UBERON:0000982,1.24e-09,8;UBERON:0004770,1.24e-09,8;UBERON:0002199,4.16e-09,46;UBERON:0002416,4.16e-09,46;UBERON:0011135,5.92e-09,5;UBERON:0002216,5.92e-09,5;UBERON:0011134,5.92e-09,5;UBERON:0002209,5.92e-09,5;UBERON:0002213,5.92e-09,5;UBERON:0005856,5.92e-09,5;UBERON:0005866,5.92e-09,5;UBERON:0005863,5.92e-09,5;UBERON:0007844,5.92e-09,5;UBERON:0011138,5.92e-09,5;UBERON:0001130,5.92e-09,5;UBERON:0001066,5.92e-09,5;UBERON:0001468,5.92e-09,5;UBERON:0003102,2.20e-08,99;UBERON:0001013,2.44e-08,14;UBERON:0007524,9.11e-08,73;UBERON:0002329,1.97e-07,71;UBERON:0003059,1.97e-07,71;UBERON:0007282,1.97e-07,71;UBERON:0004290,1.97e-07,71;UBERON:0009618,1.97e-07,71;UBERON:0002097,2.22e-07,41;UBERON:0003077,3.05e-07,72;UBERON:0007285,3.05e-07,72;UBERON:0000486,9.73e-07,83 | |||
|phase1_expression=0.54503513781167,2.99740733447376,0,2.00146596706261,1.34088328328186,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,1.98026164736075,5.63375538737457,1.34465029290355,0,1.46062018077475,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.12786256184353,2.89151321907653,1.50401373190767,1.15877215168659,7.95285947051099,1.94653948121054,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.529636723252875,8.60509862246441,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.942974704487816,0.163461903113459,1.51357427644931,2.88087962239999,0.468642863667593,0.936480230490962,0.570471821544449,1.64393548606981,0.23486899728753,1.45685649931318,0.702254033511242,1.22492502752936,0.61417158655884,2.27316718586684,0,2.22540236350701,1.82032272387605,1.43723628363248,1.17835279767846,1.12606667884768,0.554128230968366,0.438977620880838,1.22595118319608,0.150238058906597,0.226864366320042,7.71375433462106,2.77624605464138,2.54318281391474,7.80236849819446,0.92747276314595,2.83404594050192,1.11670113798954,1.5189869901714,0.584622030967192,6.56327813034698,0.736399189138395,0.323292113637624,7.4552014428489,1.0075209822764,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,5.78916844373597,0,5.10804720835177,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,3.11980435583874,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,1.74384027533312,0,0.258543431515556,7.15312891703765,2.535908257668,2.12750493267896,0,0,1.41849132023278,0,0.57191197463259,2.71310802695722,0,2.28015329005615,1.42156779497018,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.868687840005475,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,4.00136416847742,4.6115054028955,1.45579603071565,0.892144943985809,0.315404830067869,0.585707074963566,0.601892199455438,0,0,3.32112799267718,1.10621501125022,1.21637060255316,2.54541504701563,4.80400793335198,0,0,0,0,0,0.30239029332968,0.248107807818777,1.2276957863045,1.96462066103151,0,0,0.160853921143607,0,2.46735510084249,1.9531789784444,0.821271560138091,1.55776328755086,1.16210378459959,0,0,0,1.49258782613989,3.27764102412091,3.01586154406675,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,1.06337790121334,2.15668063960502,0.767518373630648,0.964856007391714,1.71872391789238,3.19036726611303,1.02271952899321,1.86967274858148,0,0,0,0,0.464845549297286,10.3888074454111,0,0,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0,0.767693373934002,8.98671874871233,0.318203247925937,0,0.899362287916574,1.37268514868027,1.06031162111118,0.202182481573316,0,0,1.46290121726877,0,1.05650146756755,2.45699840534374,2.96951407102797,0,0,0,0,1.73632660280006,10.4943160327461,0.202910376962704,0,0.563391205064483,0,0.294747123039363,0,0.354761064070598,2.11107635297664,1.31717957183961,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,1.20390222730132,0,0,0,0.0969890164884194,0,0.225980740780532,1.23337732182076,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,2.28611152076586,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,2.38807684618998,4.90797950679171,2.21922344601045,3.03044808440143,6.0376296420618,3.55924488638614,1.37304041038154,2.7221566277383,1.86524640699337,1.62640664988597,0.796483835818512,0,2.01841843939137,1.24411862352257,5.84851772027589,2.08698024724694,0.751288044986092,0.380805212168795,1.22061219961398,1.63663793282303,0.322231671127465,1.39210127963548,0.796191777397232,0,1.71697852591396,2.02049693259551,0,0,0,0,0,0.926089897295336,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.41070377476274,4.2874366829448,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,1.90691047733584,0,0.397832444232549,0,2.0170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,1.8863681038116,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0.173858272302579,4.00855682365126,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0,0.874238242015829,0,0.980593287015622,0,0,0,0,3.22861517906852,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,10.7878555268358,5.0839319149456,1.73050624849516,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0.476128862927481,0,0.124149428591716,0,0.0636471582781649,1.21270313374932,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | |phase1_expression=0.54503513781167,2.99740733447376,0,2.00146596706261,1.34088328328186,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,1.98026164736075,5.63375538737457,1.34465029290355,0,1.46062018077475,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.12786256184353,2.89151321907653,1.50401373190767,1.15877215168659,7.95285947051099,1.94653948121054,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.529636723252875,8.60509862246441,0.709336764396714,0,0,0.98667019366864,0.622422070799533,0.942974704487816,0.163461903113459,1.51357427644931,2.88087962239999,0.468642863667593,0.936480230490962,0.570471821544449,1.64393548606981,0.23486899728753,1.45685649931318,0.702254033511242,1.22492502752936,0.61417158655884,2.27316718586684,0,2.22540236350701,1.82032272387605,1.43723628363248,1.17835279767846,1.12606667884768,0.554128230968366,0.438977620880838,1.22595118319608,0.150238058906597,0.226864366320042,7.71375433462106,2.77624605464138,2.54318281391474,7.80236849819446,0.92747276314595,2.83404594050192,1.11670113798954,1.5189869901714,0.584622030967192,6.56327813034698,0.736399189138395,0.323292113637624,7.4552014428489,1.0075209822764,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,5.78916844373597,0,5.10804720835177,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,3.11980435583874,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,1.74384027533312,0,0.258543431515556,7.15312891703765,2.535908257668,2.12750493267896,0,0,1.41849132023278,0,0.57191197463259,2.71310802695722,0,2.28015329005615,1.42156779497018,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.868687840005475,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,4.00136416847742,4.6115054028955,1.45579603071565,0.892144943985809,0.315404830067869,0.585707074963566,0.601892199455438,0,0,3.32112799267718,1.10621501125022,1.21637060255316,2.54541504701563,4.80400793335198,0,0,0,0,0,0.30239029332968,0.248107807818777,1.2276957863045,1.96462066103151,0,0,0.160853921143607,0,2.46735510084249,1.9531789784444,0.821271560138091,1.55776328755086,1.16210378459959,0,0,0,1.49258782613989,3.27764102412091,3.01586154406675,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,1.06337790121334,2.15668063960502,0.767518373630648,0.964856007391714,1.71872391789238,3.19036726611303,1.02271952899321,1.86967274858148,0,0,0,0,0.464845549297286,10.3888074454111,0,0,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0,0.767693373934002,8.98671874871233,0.318203247925937,0,0.899362287916574,1.37268514868027,1.06031162111118,0.202182481573316,0,0,1.46290121726877,0,1.05650146756755,2.45699840534374,2.96951407102797,0,0,0,0,1.73632660280006,10.4943160327461,0.202910376962704,0,0.563391205064483,0,0.294747123039363,0,0.354761064070598,2.11107635297664,1.31717957183961,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0.493217028184668,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0.457987967009312,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,1.20390222730132,0,0,0,0.0969890164884194,0,0.225980740780532,1.23337732182076,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.917983958726896,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,2.28611152076586,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,2.38807684618998,4.90797950679171,2.21922344601045,3.03044808440143,6.0376296420618,3.55924488638614,1.37304041038154,2.7221566277383,1.86524640699337,1.62640664988597,0.796483835818512,0,2.01841843939137,1.24411862352257,5.84851772027589,2.08698024724694,0.751288044986092,0.380805212168795,1.22061219961398,1.63663793282303,0.322231671127465,1.39210127963548,0.796191777397232,0,1.71697852591396,2.02049693259551,0,0,0,0,0,0.926089897295336,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.41070377476274,4.2874366829448,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,1.90691047733584,0,0.397832444232549,0,2.0170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,1.8863681038116,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0.173858272302579,4.00855682365126,0.207216164163037,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.307988420568741,1.1598144313382,2.91426595835484,0,0,0,0,0,0,0,0.874238242015829,0,0.980593287015622,0,0,0,0,3.22861517906852,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0,0.436350690340377,0,10.7878555268358,5.0839319149456,1.73050624849516,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0.476128862927481,0,0.124149428591716,0,0.0636471582781649,1.21270313374932,0.435433495793923,0,0,0,0.665320713092027,0,0,0,0,2.34640942403454,0.122241444182866,0.813792356631477,0,0.201273793591026,0 | ||
|short_description=p11@COL6A3 | |short_description=p11@COL6A3 | ||
}} | }} |
Latest revision as of 03:21, 16 September 2015
Short description: | p11@COL6A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_COL6A3_5end |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | 102bp_to_ENST00000468792_5end |
EntrezGene: | COL6A3 |
HGNC: | 2213 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.10e-16 | 76 |
multi fate stem cell | 1.65e-14 | 427 |
somatic stem cell | 6.17e-14 | 433 |
connective tissue cell | 1.52e-13 | 361 |
stem cell | 3.35e-13 | 441 |
mesenchymal stem cell of adipose | 8.56e-13 | 8 |
stromal cell | 4.09e-12 | 28 |
mesenchymal cell | 5.58e-10 | 354 |
extracellular matrix secreting cell | 2.29e-08 | 15 |
GAG secreting cell | 1.05e-07 | 9 |
carbohydrate secreting cell | 1.05e-07 | 9 |
skin fibroblast | 1.33e-07 | 23 |
motile cell | 2.25e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.99e-14 | 371 |
articulation | 1.24e-09 | 8 |
skeletal joint | 1.24e-09 | 8 |
articular system | 1.24e-09 | 8 |
integument | 4.16e-09 | 46 |
integumental system | 4.16e-09 | 46 |
intervertebral cartilage | 5.92e-09 | 5 |
symphysis | 5.92e-09 | 5 |
nonsynovial joint | 5.92e-09 | 5 |
fibrous joint | 5.92e-09 | 5 |
cartilaginous joint | 5.92e-09 | 5 |
developing mesenchymal condensation | 5.92e-09 | 5 |
pre-cartilage condensation | 5.92e-09 | 5 |
cartilaginous condensation | 5.92e-09 | 5 |
cartilage element | 5.92e-09 | 5 |
post-cranial axial skeletal system | 5.92e-09 | 5 |
vertebral column | 5.92e-09 | 5 |
intervertebral disk | 5.92e-09 | 5 |
intervertebral joint | 5.92e-09 | 5 |
surface structure | 2.20e-08 | 99 |
adipose tissue | 2.44e-08 | 14 |
dense mesenchyme tissue | 9.11e-08 | 73 |
somite | 1.97e-07 | 71 |
presomitic mesoderm | 1.97e-07 | 71 |
presumptive segmental plate | 1.97e-07 | 71 |
dermomyotome | 1.97e-07 | 71 |
trunk paraxial mesoderm | 1.97e-07 | 71 |
skin of body | 2.22e-07 | 41 |
paraxial mesoderm | 3.05e-07 | 72 |
presumptive paraxial mesoderm | 3.05e-07 | 72 |
multilaminar epithelium | 9.73e-07 | 83 |